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Molecular distance geometry problems

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Abstract

The Molecular Distance Geometry Problem (MDGP) [86] is the subclass of DGP instances with K=3. Since the DGP is NP-hard for each K [107], the MDGP is also NP-hard.

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Notes

  1. 1.

    In some of our past papers, e.g., [76, 79, 83, 100], we defined DDGP, DMDGP , and \(^{\textsf {K}}\)DMDGP with one further condition, i.e. d satisfies strict simplex inequalities. This is equivalent to the condition on the rank of A in Sect. 3.3.6; its purpose is to eliminate those edge weight functions that prevent the application of the methods given in Ch. 3.

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Correspondence to Leo Liberti .

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Liberti, L., Lavor, C. (2017). Molecular distance geometry problems. In: Euclidean Distance Geometry. Springer Undergraduate Texts in Mathematics and Technology. Springer, Cham. https://doi.org/10.1007/978-3-319-60792-4_5

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