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Genetic Maps and Whole Genome Sequences of Radish

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Book cover The Radish Genome

Part of the book series: Compendium of Plant Genomes ((CPG))

Abstract

Radish, Raphanus sativus L., is a member of Brassicaceae , to which Arabidopsis thaliana , a model plant in plant biology, belongs, as do other Brassica species including important crops. However, genetic and genomic studies of radish have been behind those of Arabidopsis and Brassica. In this decade, much effort has been made to develop genetic resources for radish, e.g., DNA markers , genetic maps , and whole genome sequences . Studies using the obtained information have revealed the genome structure of radish in terms of ancestral karyotype and have also prompted the identification of genes for agronomically important traits in radish through a map-based cloning strategy and quantitative trait locus analysis. In this chapter, we review the evolving development of radish genetic map in the past 15 years and the current status of genome sequencing of radish. We also introduce the latest strategy for the construction of a high-density genetic map using next-generation sequencing technology and propose a prospective direction of genetics and genomics research in radish which would be helpful for researchers and breeders in their efforts to promote radish breeding programs efficiently.

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Author information

Authors and Affiliations

  1. Kazusa DNA Research Institute, Kisarazu, Japan

    Kenta Shirasawa

  2. Graduate School of Agricultural Science, Tohoku University, 468-1, Aoba, Aramaki, Aobaku, Sendai, 980-0845, Japan

    Hiroyasu Kitashiba

Authors
  1. Kenta Shirasawa
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  2. Hiroyasu Kitashiba
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Corresponding author

Correspondence to Hiroyasu Kitashiba .

Editor information

Editors and Affiliations

  1. Graduate School of Agricultural Science, Tohoku University, Sendai, Miyagi, Japan

    Takeshi Nishio

  2. Graduate School of Agricultural Science, Tohoku University, Sendai, Miyagi, Japan

    Hiroyasu Kitashiba

3.1 Electronic supplementary material

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Supplementary material 1 (XLSX 418 kb)

Supplementary material 2 (XLSX 45 kb)

Supplementary Fig. 3.1

Comparison of lengths of Rs-RAD map based on MSTmap and Mapmaker programs (PDF 18 kb)

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Shirasawa, K., Kitashiba, H. (2017). Genetic Maps and Whole Genome Sequences of Radish. In: Nishio, T., Kitashiba, H. (eds) The Radish Genome. Compendium of Plant Genomes. Springer, Cham. https://doi.org/10.1007/978-3-319-59253-4_3

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