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A Case Study on the Integration of Heterogeneous Data Sources in Public Health

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Part of the book series: Lecture Notes in Computer Science ((LNBI,volume 10209))

Abstract

The paper reports on a case study regarding the integration of heterogeneous data sources, coming from different institutions, needed to support several studies related to the health status of the population of L’Aquila (Italy) after the earthquake of April 6th 2009. In detail, the paper initially describes all the health studies, then the data sources required to support them, finally proposes a simplified federated architecture and a straightforward technological solution to implement it.

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Notes

  1. 1.

    The Abruzzo’s RHA is a technical body of the Abruzzo Region that concurs to the definition of the health policies and strategies.

  2. 2.

    The case of citizen that provide to an alternative accommodation by themselves.

  3. 3.

    New houses build for the emergency period by the central government.

  4. 4.

    Temporary houses built for the emergency period by the municipality.

  5. 5.

    For sake of clarity, in English, COD_FISCALE is the tax code, DATA_RIC means the date of admission, DATA_DIM means the date of discharge.

References

  1. AIFA. L’uso dei farmaci in Italia - Rapporto OsMed 2015 (2015)

    Google Scholar 

  2. Asher, M.I., Montefort, S., Björkstén, B., Lai, C.K.W., Strachan, D.P., Weiland, S.K., Williams, H., ISAAC Phase Three Study Group.: Worldwide time trends in the prevalence of symptoms of asthma, allergic rhinoconjunctivitis, eczema in childhood: ISAAC phases one and three repeat multicountry cross-sectional surveys. Lancet (Lond. Engl.) 368(9537), 733–743 (2006)

    Google Scholar 

  3. Bartholomew, D.: MariaDB Cookbook. Packt Publishing Ltd, Birmingham (2014)

    Google Scholar 

  4. Beck, C.A., Southern, D.A., Saitz, R., Knudtson, M.L., Ghali, W.A.: Alcohol and drug use disorders among patients with myocardial infarction: associations with disparities in care and mortality. PloS One 8(9), e66551 (2013)

    Article  Google Scholar 

  5. Bingefors, K., Svensson, A., Isacson, D., Lindberg, M.: Self-reported lifetime prevalence of atopic dermatitis and co-morbidity with asthma and eczema in adulthood: a population-based cross-sectional survey. Acta Dermato-Venereologica 93(4), 438–441 (2013)

    Article  Google Scholar 

  6. Burgio, A., Grippo, F., Pappagallo, M., Crialesi, R.: Hospitalization for drug-related disorders in Italy: trends and comorbidity. Epidemiol. Biostatistics Publ. Health 12(1), 1–6 (2015)

    Google Scholar 

  7. Cofini, V., Carbonelli, A., Cecilia, M.R., Binkin, N., di Orio, F.: Post traumatic stress disorder and coping in a sample of adult survivors of the Italian earthquake. Psychiatry Res. 229(1–2), 353–358 (2015)

    Article  Google Scholar 

  8. Comino, E.J., Hermiz, O., Flack, J., Harris, E., Powell Davies, G., Harris, M.F.: Using population health surveys to provide information on access to and use of quality primary health care. Aust. Health Rev.: Publ. Aust. Hosp. Assoc. 30(4), 485–495 (2006)

    Article  Google Scholar 

  9. Conferenza delle Regioni e delle Provincie Autonome. Accordo Interregionale per la Compensazione della Mobilità Sanitaria, May 2013

    Google Scholar 

  10. Davis, K., Anderson, G., Steinberg, E.: Diagnosis related group prospective payment: implications for health care and medical technology. Health Policy (Amst. Neth.) 4(2), 139–147 (1984)

    Article  Google Scholar 

  11. Dusetzina, S.B., Tyree, S., Meyer, A.-M., Meyer, A., Green, L., Carpenter, W.R.: An Overview of Record Linkage Methods. Agency for Healthcare Research and Quality (US), September 2014

    Google Scholar 

  12. Elmasri, R., Navathe, S.B.: Fundamentals of Database Systems. Prentice Hall College Div, Boston (2010). 6 har/psc edizione edition

    MATH  Google Scholar 

  13. Fabiani, L., Mammarella, L., Vittorini, P., Zazzara, F., Di Orio, F.: Preliminary analysis of the respiratory disease, based on hospital discharge records, in the province of L’Aquila, Abruzzo, Italy. Annali Di Igiene: Medicina Preventiva E Di Comunita 28(6), 392–403 (2016)

    Google Scholar 

  14. Gigantesco, A., Mirante, N., Granchelli, C., Diodati, G., Cofini, V., Mancini, C., Carbonelli, A., Tarolla, E., Minardi, V., Salmaso, S., D’Argenio, P.: Psychopathological chronic sequelae of the 2009 earthquake in L’Aquila, Italy. J. Affect. Disord. 148(2–3), 265–271 (2013)

    Article  Google Scholar 

  15. Haas, L., Miller, R., Niswonger, B., Tork Roth, M., Schwarz, P., Wimmers, E.: Transforming heterogeneous data with database middleware: beyond integration. Data Eng. 22(1), 31–36 (1999)

    Google Scholar 

  16. Indinnimeo, L., Porta, D., Forastiere, F., De Vittori, V., De Castro, G., Zicari, A.M., Tancredi, G., Melengu, T., Duse, M.: Prevalence and risk factors for atopic disease in a population of preschool children in Rome: challenges to early intervention. Int. J. Immunopathol. Pharmacol. 29(2), 308–319 (2016)

    Article  Google Scholar 

  17. Watson, J.T., Gayer, M., Connolly, M.A.: Epidemics after natural disasters. Emerg. Infect. Dis. J. 13(1), 1 (2007)

    Article  Google Scholar 

  18. Kawano, T., Hasegawa, K., Watase, H., Morita, H., Yamamura, O.: Infectious disease frequency among evacuees at shelters after the great eastern Japan earthquake and tsunami: a retrospective study. Disaster Med. Publ. Health Preparedness 8(1), 58–64 (2014)

    Article  Google Scholar 

  19. Kouadio, I.K., Aljunid, S., Kamigaki, T., Hammad, K., Oshitani, H.: Infectious diseases following natural disasters: prevention and control measures. Expert Rev. Anti-Infective Therapy 10(1), 95–104 (2012)

    Article  Google Scholar 

  20. MariaDB. CONNECT Table Types, December 2016

    Google Scholar 

  21. MariaDB. User-defined Functions, December 2016

    Google Scholar 

  22. Mattei, A., Angelone, A.M., Michetti, M., Sbarbati, M., Ceci, R., Murgano, A., di Orio, F.: Epidemiological impact of RV gastroenteritis in the Abruzzo Region: SDO analysis. Annali Di Igiene: Medicina Preventiva E Di Comunita 21(1), 41–49 (2009)

    Google Scholar 

  23. Mattei, A., Sbarbati, M., Fiasca, F., Angelone, A.M., Mazzei, M.C., di Orio, F.: Temporal trends in hospitalization for rotavirus gastroenteritis: a nationwide study in Italy, 2005–2012. Hum. Vaccines Immunotherapeutics 12(2), 534–539 (2016)

    Article  Google Scholar 

  24. Minardi, V., Gigantesco, A., Mancini, C., Quarchioni, E., D’Argenio, P., Cofini, V.: Behavioural risk factors in L’Aquila (Central Italy) 3–5 years after the 2009 earthquake. Epidemiologia E Prevenzione 40(2 Suppl 1), 34–41 (2016)

    Google Scholar 

  25. Ministero della Salute. Sistemi di sorveglianza, May 2016

    Google Scholar 

  26. Mohammed, M.A., Stevens, A.: The value of administrative databases. BMJ: Br. Med. J. 334(7602), 1014–1015 (2007)

    Article  Google Scholar 

  27. W. H. Organization. International Statistical Classification of Diseases and Related Health Problems, vol. 1. World Health Organization, Geneva (2004)

    Google Scholar 

  28. Parker, J.D., Akinbami, L.J., Woodruff, T.J.: Air pollution and childhood respiratory allergies in the United States. Environ. Health Perspect. 117(1), 140–147 (2009)

    Article  Google Scholar 

  29. Pollice, R., Bianchini, V., Roncone, R., Casacchia, M.: Marked increase in substance use among young people after L’Aquila earthquake. Eur. Child Adolesc. Psychiatry 20(8), 429–430 (2011)

    Article  Google Scholar 

  30. Rahm, E., Bernstein, P.A.: A survey of approaches to automatic schema matching. VLDB J. 10(4), 334–350 (2001)

    Article  MATH  Google Scholar 

  31. Reddy, M.P., Prasad, B.E., Reddy, P.G., Gupta, A.: A methodology for integration of heterogeneous databases. IEEE Trans. Knowl. Data Eng. 6(6), 920–933 (1994)

    Article  Google Scholar 

  32. Riedler, J., Braun-Fahrländer, C., Eder, W., Schreuer, M., Waser, M., Maisch, S., Carr, D., Schierl, R., Nowak, R., von Mutius, E., ALEX Study Team.: Exposure to farming in early life, development of asthma, allergy: a cross-sectional survey. Lancet (Lond. Engl.) 358(9288), 1129–1133 (2001)

    Google Scholar 

  33. Ripoll Gallardo, A., Alesina, M., Pacelli, B., Serrone, D., Iacutone, G., Faggiano, F., Della Corte, F., Allara, E.: Medium- and long-term health effects of the L’Aquila earthquake (Central Italy, 2009) and of other earthquakes in high-income Countries: a systematic review. Epidemiologia E Prevenzione 40(2 Suppl 1), 14–21 (2016)

    Google Scholar 

  34. Romanelli, A.M., Raciti, M., Protti, M.A., Prediletto, R., Fornai, E., Faustini, A.: How reliable are current data for assessing the actual prevalence of chronic obstructive pulmonary disease? PloS One 11(2), e0149302 (2016)

    Article  Google Scholar 

  35. Roth, M.T., Schwarz, P.M.: Don’t scrap it, wrap it! A wrapper architecture for legacy data sources. In: VLDB, vol. 97, pp. 25–29 (1997)

    Google Scholar 

  36. Ruokolainen, L., von Hertzen, L., Fyhrquist, N., Laatikainen, T., Lehtomäki, J., Auvinen, P., Karvonen, A.M., Hyvärinen, A., Tillmann, V., Niemelä, O., Knip, M., Haahtela, T., Pekkanen, J., Hanski, I.: Green areas around homes reduce atopic sensitization in children. Allergy 70(2), 195–202 (2015)

    Article  Google Scholar 

  37. Sheth, A.P., Larson, J.A.: Federated database systems for managing distributed, heterogeneous, and autonomous databases. ACM Comput. Surv. 22(3), 183–236 (1990)

    Article  Google Scholar 

  38. Sorrentino, C.: La dinamica temporale della variabilità regionale, July 2013

    Google Scholar 

  39. Sujansky, W.: Heterogeneous database integration in biomedicine. J. Biomed. Inform. 34(4), 285–298 (2001)

    Article  Google Scholar 

  40. Thygesen, L.C., Ersbøll, A.K.: When the entire population is the sample: strengths and limitations in register-based epidemiology. Eur. J. Epidemiol. 29(8), 551–558 (2014)

    Article  Google Scholar 

  41. van der Hulst, A.E., Klip, H., Brand, P.L.P.: Risk of developing asthma in young children with atopic eczema: a systematic review. J. Allergy Clin. Immunol. 120(3), 565–569 (2007)

    Article  Google Scholar 

  42. Williams, H.C.: Clinical practice. Atopic dermatitis. New Engl. J. Med. 352(22), 2314–2324 (2005)

    Article  Google Scholar 

  43. Zuberbier, T., Lötvall, J., Simoens, S., Subramanian, S.V., Church, M.K.: Economic burden of inadequate management of allergic diseases in the European Union: a GA(2) LEN review. Allergy 69(10), 1275–1279 (2014)

    Article  Google Scholar 

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Acknowledgements

The authors thank Dr. Mascitelli and Dr. Di Candia for their valuable support.

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Correspondence to Pierpaolo Vittorini .

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Vittorini, P., Angelone, A.M., Cofini, V., Fabiani, L., Mattei, A., Necozione, S. (2017). A Case Study on the Integration of Heterogeneous Data Sources in Public Health. In: Rojas, I., Ortuño, F. (eds) Bioinformatics and Biomedical Engineering. IWBBIO 2017. Lecture Notes in Computer Science(), vol 10209. Springer, Cham. https://doi.org/10.1007/978-3-319-56154-7_37

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  • DOI: https://doi.org/10.1007/978-3-319-56154-7_37

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