Skip to main content

Soft Kernel Target Alignment for Two-Stage Multiple Kernel Learning

  • Conference paper
  • First Online:

Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 9956))

Abstract

The two-stage multiple kernel learning (MKL) algorithms gained the popularity due to their simplicity and modularity. In this paper, we focus on two recently proposed two-stage MKL algorithms: ALIGNF and TSMKL. We first show through a simple vectorization of the input and target kernels that ALIGNF corresponds to a non-negative least squares and TSMKL to a non-negative SVM in the transformed space. Then we propose ALIGNF+, a soft version of ALIGNF, based on the observation that the dual problem of ALIGNF is essentially a one-class SVM problem. It turns out that the ALIGNF+ just requires an upper bound on the kernel weights of original ALIGNF. This upper bound makes ALIGNF+ interpolate between ALIGNF and the uniform combination of kernels. Our experiments demonstrate favorable performance and improved robustness of ALIGNF+ comparing to ALIGNF. Experiments data and code written in python are freely available at github (https://github.com/aalto-ics-kepaco/softALIGNF).

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

References

  1. Cortes, C., Kloft, M., Mohri, M.: Learning kernels using local rademacher complexity. In: Advances in Neural Information Processing Systems, vol. 26, pp. 2760–2768 (2013)

    Google Scholar 

  2. Cortes, C., Mohri, M., Rostamizadeh, A.: Algorithms for learning kernels based on centered alignment. J. Mach. Learn. Res. 13(1), 795–828 (2012)

    MathSciNet  MATH  Google Scholar 

  3. Cortes, C., Mohri, M., Rostamizadeh, A.: Multi-class classification with maximum margin multiple kernel. In: Proceedings of the 30th International Conference on Machine Learning, pp. 46–54 (2013)

    Google Scholar 

  4. Cristianini, N., Kandola, J., Elisseeff, A., Shawe-Taylor, J.: On kernel-target alignment. In: Advances in Neural Information Processing Systems, vol. 14, pp. 367–373. MIT Press (2002)

    Google Scholar 

  5. Dührkop, K., Shen, H., Meusel, M., Rousu, J., Böcker, S.: Searching molecular structure databases with tandem mass spectra using CSI: fingerid. Proc. Nat. Acad. Sci. 112(41), 12580–12585 (2015)

    Article  Google Scholar 

  6. Evgeniou, T., Micchelli, C.A., Pontil, M.: Learning multiple tasks with kernel methods. J. Mach. Learn. Res. 6, 615–637 (2005)

    MathSciNet  MATH  Google Scholar 

  7. Gönen, M., Alpaydın, E.: Multiple kernel learning algorithms. J. Mach. Learn. Res. 12, 2211–2268 (2011)

    MathSciNet  MATH  Google Scholar 

  8. Guillaumin, M., Verbeek, J., Schmid, C.: Multimodal semi-supervised learning for image classification. In: IEEE Conference on Computer Vision & Pattern Recognition, pp. 902–909 (2010)

    Google Scholar 

  9. Heinonen, M., Shen, H., Zamboni, N., Rousu, J.: Metabolite identification and molecular fingerprint prediction through machine learning. Bioinformatics 28(18), 2333–2341 (2012)

    Article  Google Scholar 

  10. Herbrich, R.: Learning Kernel Classifiers: Theory and Algorithms. MIT Press, Cambridge (2001)

    Google Scholar 

  11. Jawanpuria, P., Varma, M., Nath, S.: On p-norm path following in multiple kernel learning for non-linear feature selection. In: Proceedings of the 31st International Conference on Machine Learning, pp. 118–126 (2014)

    Google Scholar 

  12. Kloft, M., Brefeld, U., Sonnenburg, S., Zien, A.: Lp-norm multiple kernel learning. J. Mach. Learn. Res. 12, 953–997 (2011)

    MathSciNet  MATH  Google Scholar 

  13. Kumar, A., Niculescu-Mizil, A., Kavukcuoglu, K., Daume III, H.: A binary classification framework for two-stage multiple kernel learning. In: Proceedings of the 29th International Conference on Machine Learning (2012)

    Google Scholar 

  14. Lanckriet, G.R., Cristianini, N., Bartlett, P., Ghaoui, L.E., Jordan, M.I.: Learning the kernel matrix with semidefinite programming. J. Mach. Learn. Res. 5, 27–72 (2004)

    MathSciNet  MATH  Google Scholar 

  15. Makadia, A., Pavlovic, V., Kumar, S.: Baselines for image annotation. Int. J. Comput. Vis. 90(1), 88–105 (2010)

    Article  Google Scholar 

  16. Micchelli, C.A., Pontil, M.A.: On learning vector-valued functions. Neural Comput. 17, 177–204 (2005)

    Article  MathSciNet  MATH  Google Scholar 

  17. Moore, G., Bergeron, C., Bennett, K.P.: Model selection for primal SVM. Mach. Learn. 85(1), 175–208 (2011)

    Article  MathSciNet  MATH  Google Scholar 

  18. Schölkopf, B., Platt, J.C., Shawe-Taylor, J., Smola, A.J., Williamson, R.C.: Estimating the support of a high-dimensional distribution. Neural Comput. 13(7), 1443–1471 (2001)

    Article  MATH  Google Scholar 

  19. Sechidis, K., Tsoumakas, G., Vlahavas, I.: On the stratification of multi-label data. In: Gunopulos, D., Hofmann, T., Malerba, D., Vazirgiannis, M. (eds.) ECML PKDD 2011, Part III. LNCS(LNAI), vol. 6913, pp. 145–158. Springer, Heidelberg (2011)

    Chapter  Google Scholar 

  20. Shalev-Shwartz, S., Singer, Y., Srebro, N., Cotter, A.: Pegasos: primal estimated sub-gradient solver for SVM. Math. Program. 127(1), 3–30 (2011)

    Article  MathSciNet  MATH  Google Scholar 

  21. Shen, H., Dührkop, K., Böcker, S., Rousu, J.: Metabolite identification through multiple kernel learning on fragmentation trees. Bioinformatics 30(12), i157–i164 (2014)

    Article  Google Scholar 

  22. Yamada, M., Jitkrittum, W., Sigal, L., Xing, E.P., Sugiyama, M.: High-dimensional feature selection by feature-wise kernelized lasso. Neural Comput. 26(1), 185–207 (2014)

    Article  MathSciNet  Google Scholar 

  23. Zien, A., Ong, C.S.: Multiclass multiple kernel learning. In: Proceedings of the 24th International Conference on Machine learning, pp. 1191–1198. ACM (2007)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Huibin Shen .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2016 Springer International Publishing Switzerland

About this paper

Cite this paper

Shen, H., Szedmak, S., Brouard, C., Rousu, J. (2016). Soft Kernel Target Alignment for Two-Stage Multiple Kernel Learning. In: Calders, T., Ceci, M., Malerba, D. (eds) Discovery Science. DS 2016. Lecture Notes in Computer Science(), vol 9956. Springer, Cham. https://doi.org/10.1007/978-3-319-46307-0_27

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-46307-0_27

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-46306-3

  • Online ISBN: 978-3-319-46307-0

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics