Skip to main content

Bioprospecting for Bioactive Actinomycetes from Patagonia

  • Chapter
  • First Online:
Biology and Biotechnology of Patagonian Microorganisms

Abstract

Actinomycetes have been and still are the most promising bacterial source of antibiotic and antifungal substances. It is known that the genetic potential of these microorganisms has been underexplored. Up to date, almost all continents have been subject to bioprospecting for bioactive actinomycetes. Reports on the screening of actinomycetes come mainly from Europe, India, and countries of Africa. In contrast, some biologically rich regions, particularly Patagonia and other regions from South America, have been scarcely explored. Bioprospecting based on the exploration of new environments, such as the deep sea and marine invertebrates, led to the discovery of new and unique bioactive metabolites. Patagonia offers a vast diversity of such potential environments and sources of bioactive strains, including autochthonous marine invertebrates, endemic plants and lichens, wide unoccupied desert areas with high-saline environments exposed to high temperatures, pristine environments, and ancient forests. The latest most successful approaches in bioprospecting for bioactive actinomycetes are reviewed in this chapter, together with a discussion of the available reports on bioprospecting for actinomycetes from Patagonia.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  • Ayuso-Sacido A, Genilloud O (2005) New PCR primers for the screening of NRPS and PKS-I systems in Actinomycetes: detection and distribution of these biosynthetic gene sequences in major taxonomic groups. Microbial Ecol 49:10–24

    Article  CAS  Google Scholar 

  • Baltz RH (2007) Antimicrobials from Actinomycetes: back to the future. Microbe 2:125–131

    Google Scholar 

  • Basilio A, González I, Vicente MF, Gorrochategui J, Cabello A, González A, Genilloud O (2003) Patterns of antimicrobial activities from soil Actinomycetes isolated under different conditions of pH and salinity. J Appl Microbiol 95:814–823

    Article  CAS  PubMed  Google Scholar 

  • Castillo UF, Browne L, Strobel G, Hess WM, Ezra S, Pacheco G, Ezra D (2007) Biologically active endophytic Streptomycetes from Nothofagus spp. and other plants in Patagonia. Microb Ecol 53:12–19

    Article  PubMed  Google Scholar 

  • Gupta AP, Pandotra P, Sharma R, Kushwaha M, Gupta S (2013) Marine resource: a promising future for anticancer drugs (Chapter 8). In: Atta-ur-Rahman (ed) Studies in natural products chemistry, vol 40. Elsevier, Amsterdam

    Google Scholar 

  • Haferburg G, Kothe E (2013) Activation of silent genes in Actinobacteria by exploiting metal stress. In: Amoroso MJ, Benimeli CS, Cuozzo SA (eds) Actinobacteria. Application in bioremediation and production of industrial enzymes. CRC Press, Boca Raton, pp 56–73

    Chapter  Google Scholar 

  • Hayakawa M, Yoshida Y, Iimura Y (2004) Selective isolation of bioactive soil Actinomycetes belonging to the Streptomyces violaceusniger phenotypic cluster. J Appl Microbiol 96:973–981

    Article  CAS  PubMed  Google Scholar 

  • Huitu Z, Linzhuan W, Aiming L, Guizhi S, Feng H, Qiuping L, Yuzhen W, Huanzhang X, Qunjie G, Yiguang W (2009) PCR screening of 3-amino-5-hydroxybenzoic acid synthase gene leads to identification of ansamycins and AHBA-related antibiotic producers in Actinomycetes. J Appl Microbiol 106:755–763

    Article  CAS  PubMed  Google Scholar 

  • Hwang Y-B, Lee M-Y, Park H-J, Han K, Kim E-S (2007) Isolation of putative polyene-producing Actinomycetes strains via PCR-based genome screening for polyene-specific hydroxylase genes. Process Biochem 42:102–107

    Article  CAS  Google Scholar 

  • Metsä-Ketelä M, Salo V, Halo L, Hautala A, Hakala J, Mäntsälä P, Ylihonko K (1999) An efficient approach for screening minimal PKS genes from Streptomyces. FEMS Microbiol Lett 180:1–6

    Article  PubMed  Google Scholar 

  • Okoro CK, Brown R, Jones AL, Andrews BA, Asenjo JA, Goodfellow M, Bull AT (2009) Diversity of culturable Actinomycetes in hyper-arid soils of the Atacama Desert, Chile. Antonie van Leeuwenhoek J Microb 95:121–133

    Article  Google Scholar 

  • Olivera NL, Vela Gurovic MS (2013) Bioprospección de actinomicetes nativos de la región patagónica con actividad antimicrobiana contra patógenos de peces. Rev Argent Microbiol 45(S1):173

    Google Scholar 

  • Peeters K, Ertz D, Willem A (2011) Culturable bacterial diversity at the Princess Elisabeth Station (Utsteinen, Sør Rondane Mountains, East Antarctica) harbours many new taxa. Syst Appl Microbiol 34:360–367

    Article  PubMed  Google Scholar 

  • Rate ME, Houssen WE, Arnold M, Abdelrahman MH, Deng H, Harrison WTA, Okoro CK, Asenjo JA, Andrews Barbara A, Ferguson G, Bull AT, Goodfellow M, Ebel R, Jaspars M (2011) Chaxamycins AD, bioactive Ansamycins from a hyper-arid desert Streptomyces sp. J Nat Prod 74:1491–1499

    Article  Google Scholar 

  • Scervino JM, Messuti MI, Solans M, Vobis G (2014) Actinomicetes cultivables asociados a microecosistemas liquénicos de la selva templada valdiviana, Argentina. Bol Soc Argent Bot 49:441–445

    Google Scholar 

  • Solans M, Vobis G (2003) Actinomicetes saprofíticos asociados a la rizósfera y rizoplano de Discaria trinervis. Ecol Austr 13:97–107

    Google Scholar 

  • Takahashi Y, Omura S (2003) Isolation of new actinomycete strains for the screening of new bioactive products. J Gen Appl Microbiol 49:141–154

    Article  CAS  PubMed  Google Scholar 

  • Vela Gurovic MS, Olivera NL (2014) Characterization of the bioactive diffusible pigment of an actinomycete isolated from Patagonian soil. In: Conference proceedings of the 3rd international meeting on Pharmaceutical Sciences, 18–19 Sept, Córdoba, Argentina. International Journal of Pharmaceutical Sciences and Research. http://ijpsr.com/wp-content/uploads/2015/05/Proceedings-RICIFa2014-Cordoba-ARGENTINA.pdf

  • Solans M, Vobis G (2013) Biology of actinomycetes in the rhizosphere of nitrogen-fixing plants. In: Amoroso MJ, Benimeli CS, Cuozzo SA (eds) Actinobacteria. Application in bioremediation and production of industrial enzymes. CRC Press, Boca Raton, pp 1–25

    Google Scholar 

  • Vobis G, Solans M, Chaia E (2001) Géneros raros o pocos conocidos de Actinomicetes en Argentina. In: Abstracts of the XXVIII Jornadas Argentinas de Botánica, Santa Rosa, La Pampa, 21–25 Oct 2001

    Google Scholar 

  • Vreulink J-M, Esterhuyse A, Jacobs K, Botha A (2007) Soil properties that impact yeast and actinomycete numbers in sandy low nutrient soils. Can J Microbiol 53:1369–1374

    Article  CAS  PubMed  Google Scholar 

  • Wawrik B, Kutliev D, Abdivasievna UA, Kukor JJ, Zylstra GJ, Kerkhof L (2007) Biogeography of Actinomycetes communities and type II polyketide synthase genes in soils collected in New Jersey and Central Asia. Appl Environ Microbiol 73:2982–2989

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Zazopoulos E, Huang K, Staffa A, Liu W, Bachmann BO, Nonaka K, Ahlert J, Thorson JS, Shen B, Farnet CM (2003) A genomics-guided approach for discovering and expressing cryptic metabolic pathways. Nat Biotechnol 21:187–190

    Article  CAS  PubMed  Google Scholar 

  • Zheng Z, Zeng W, Huang Y, Yang Z, Li J, Cai H, Su W (2000) Detection of antitumor and antimicrobial activities in marine organism associated Actinomycetes isolated from the Taiwan Strait, China. FEMS Microbiol Lett 188:87–91

    Article  CAS  PubMed  Google Scholar 

  • Zotchev SB (2012) Marine Actinomycetes as an emerging resource for the drug development pipelines. J Biotechnol 158:168–175

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

This work was supported by ANPCyT (Agencia Nacional de Promoción Científica y Tecnológica, PICT 2012-2361). M. S. Vela Gurovic is a research member of the National Scientific and Technical Research Council of Argentina (CONICET).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to María Soledad Vela Gurovic .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2016 Springer International Publishing Switzerland

About this chapter

Cite this chapter

Gurovic, M.S.V. (2016). Bioprospecting for Bioactive Actinomycetes from Patagonia. In: Olivera, N., Libkind, D., Donati, E. (eds) Biology and Biotechnology of Patagonian Microorganisms. Springer, Cham. https://doi.org/10.1007/978-3-319-42801-7_9

Download citation

Publish with us

Policies and ethics