Abstract
Therapists are faced with the overwhelming task of identifying, reading, and incorporating new information from a vast and fast growing volume of publications into their daily clinical decisions. In this paper, we propose a system that will semantically analyze patient records and medical articles, perform medical domain specific inference to extract knowledge profiles, and finally recommend publications that best match with a patient’s health profile. We present specific knowledge extraction and matching details, examples, and results from the mental health domain.
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References
Medical subject headings (mesh). https://www.nlm.nih.gov/pubs/factsheets/mesh.html
Aronson, A.R.: Effective mapping of biomedical text to the umls metathesaurus: the metamap program. In: Proceedings of AMIA Symposium, pp. 17–21 (2001). http://view.ncbi.nlm.nih.gov/pubmed/11825149
Balakrishna, M., Moldovan, D., Tatu, M., Olteanu, M.: Semi-automatic domain ontology creation from text resources. In: Proceedings of the Seventh International Conference on Language Resources and Evaluation (LREC 2010), Valletta, Malta, May 2010
Blanco, E., Moldovan, D.: Semantic representation of negation using focus detection. In: Proceedings of the 49th Annual Meeting of the Association for Computational Linguistics: Human Language Technologies, pp. 581–589. Association for Computational Linguistics, Portland, Oregon, USA, June 2011. http://www.aclweb.org/anthology/P11-1059
Blanco, E., Moldovan, D.: Unsupervised learning of semantic relation composition. In: Proceedings of the 49th Annual Meeting of the Association for Computational Linguistics: Human Language Technologies, pp. 1456–1465. Association for Computational Linguistics, Portland, Oregon, USA, June 2011. http://www.aclweb.org/anthology/P11-1146
Ceusters, W., Elkin, P., Smith, B.: Negative findings in electronic health records and biomedical ontologies: a realist approach. Int. J. Med. Inform. 76(Suppl 3), 326–333 (2007). http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2211452/?tool=pubmed
Choi, S., Choi, J., Yoo, S., Kim, H., Lee, Y.: Semantic concept-enriched dependence model for medical information retrieval. J. Biomed. Inf. 47, 18–27 (2014). http://www.sciencedirect.com/science/article/pii/S153204641300141X
Grenon, P., Smith, B., Goldberg, L.: Biodynamic ontology: Applying bfo in the biomedical domain. Stud. Health Technol. Inform. 102, 20–38 (2004)
Liu, Z., Chu, W.W.: Knowledge-based query expansion to support scenario-specific retrieval of medical free text. Technical report, Information Retrieval (2005)
Luo, G., Tang, C., Yang, H., Wei, X.: Medsearch: A specialized search engine for medical information retrieval. In: Proceedings of the 17th ACM Conference on Information and Knowledge Management, CIKM 2008, pp. 143–152. ACM, NY, USA, New York (2008). http://doi.acm.org/10.1145/1458082.1458104
Moldovan, D., Blanco, E.: Polaris: Lymba’s semantic parser. In: Proceedings of LREC-2012, pp. 66–72 (2012)
Morante, R., Blanco, E.: *SEM 2012 Shared task: resolving the scope and focus of negation. In: Proceedings of the First Joint Conference on Lexical and Computational Semantics (*SEM 2012), pp. 265–274. Montréal, Canada, June 2012
Qiu, Y., Frei, H.P.: Concept based query expansion. In: Proceedings of the 16th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval (1993)
Spackman, K.A., Campbell, K.E., Côté, R.A.: SNOMED RT: A reference terminology for health care. In: Proceedings of the AMIA Annual Fall Symposium, pp. 640–644 (1997)
Zheng, J., Yu, H.: Key concept identification for medical information retrieval. In: Mrquez, L., Callison-Burch, C., Su, J., Pighin, D., Marton, Y. (eds.) EMNLP, pp. 579–584. The Association for Computational Linguistics (2015). http://dblp.uni-trier.de/db/conf/emnlp/emnlp2015.html#ZhengY15
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Erekhinskaya, T., Balakrishna, M., Tatu, M., Moldovan, D. (2016). Personalized Medical Reading Recommendation: Deep Semantic Approach. In: Gao, H., Kim, J., Sakurai, Y. (eds) Database Systems for Advanced Applications. DASFAA 2016. Lecture Notes in Computer Science(), vol 9645. Springer, Cham. https://doi.org/10.1007/978-3-319-32055-7_8
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