Skip to main content

Modeling Dynamic Processes with Memory by Higher Order Temporal Models

  • Chapter
  • First Online:
Foundations of Biomedical Knowledge Representation

Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 9521))

Abstract

Most practical uses of Dynamic Bayesian Networks (DBNs) involve temporal influences of the first order, i.e., influences between neighboring time steps. This choice is a convenient approximation influenced by the existence of efficient algorithms for first order models and limitations of available tools. In this paper, we focus on the question whether constructing higher time-order models is worth the effort when the underlying system’s memory goes beyond the current state. We present the results of an experiment in which we successively introduce higher order DBN models monitoring woman’s monthly cycle and measure the accuracy of these models in estimating the fertile period around the day of ovulation. We show that higher order models are more accurate than first order models. However, we have also observed over-fitting and a resulting decrease in accuracy when the time order chosen is too high.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Barron, M.L., Fehring, R.J.: Basal body temperature assessment: is it useful to couples seeking pregnancy? Am. J. Matern. Child Nurs. 30(5), 290–296 (2005)

    Article  Google Scholar 

  2. Colombo, B., Masarotto, G.: Daily fecundability: first results from a new data base. Demographic Res. 3(5), (2000)

    Google Scholar 

  3. Dean, T., Kanazawa, K.: A model for reasoning about persistence and causation. Comput. Intell. 5(2), 142–150 (1989)

    Article  Google Scholar 

  4. Dunson, D.B., Sinai, I., Colombo, B.: The relationship between cervical secretions and the daily probabilities of pregnancy effectiveness of the TwoDay algorithm. Hum. Reprod. 16(11), 2278–2282 (2001)

    Article  Google Scholar 

  5. Kippley, J., Kippley, S.: The Art of Natural Family Planning, 4th edn. The Couple to Couple League, Cincinnati (1996)

    Google Scholar 

  6. World Health Organization: A prospective multicentre trial of the ovulation method of natural family planning. III. Characteristics of the menstrual cycle and of the fertile phase. Fertil. Steril. 40(6), 773–778 (1983)

    Google Scholar 

  7. Pearl, J.: Probabilistic Reasoning in Intelligent Systems: Networks of Plausible Inference. Morgan Kaufmann Publishers Inc., San Mateo (1988)

    Google Scholar 

  8. Potter Jr., R.G.: Length of the fertile period. Milbank Q. 39, 132–162 (1961)

    Article  Google Scholar 

  9. Rötzer, J.: Supplemented basal body temperature and regulation of conception. Archiv für Gynäkologie 206(2), 195–214 (1968)

    Article  Google Scholar 

  10. Royston, J.P.: Basal body temperature, ovulation and the risk of conception, with special reference to the lifetimes of sperm and egg. Biometrics 38(2), 397–406 (1982)

    Article  Google Scholar 

  11. Shannon, C.E.: A mathematical theory of communication. Bell Syst. Tech. J. 27(1), 379–423 (1948)

    Article  MATH  MathSciNet  Google Scholar 

  12. Szymański, Z.: Płodność i Planowanie Rodziny. Wydawnictwo Pomorskiej Akademii Medycznej, Szczecin (2004)

    Google Scholar 

  13. Weschler, T.: Taking Charge of Your Fertility: The Definitive Guide to Natural Birth Control, Pregnancy Achievement, and Reproductive Health. Collins (2006)

    Google Scholar 

  14. Wilcox, A.J., Weinberg, C.R., Baird, D.D.: Timing of sexual intercourse in relation to ovulation effects on the probability of conception, survival of the pregnancy, and sex of the baby. N. Engl. J. Med. 333(23), 1517–1521 (1995)

    Article  Google Scholar 

Download references

Acknowledgments

Our work was supported in part XDATA program of Defense Advanced Research Projects Agency (DARPA), administered through Air Force Research Laboratory contract FA8750-12-C-0332 and the National Institute of Health under grant number U01HL101066-01. We thank Bernardo Colombo, Guido Masarotto, Fausta Ongaro, Petra Frank-Herrmann, and other investigators of the European Study of Daily Fecundability for sharing their data with us. The empirical work described in this chapter was performed using , an inference engine, and GeNIe, a development environment for reasoning in graphical probabilistic models, both developed at the Decision Systems Laboratory, University of Pittsburgh, and available at http://genie.sis.pitt.edu/.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Marek J. Druzdzel .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2015 Springer International Publishing Switzerland

About this chapter

Cite this chapter

Łupińska-Dubicka, A., Druzdzel, M.J. (2015). Modeling Dynamic Processes with Memory by Higher Order Temporal Models. In: Hommersom, A., Lucas, P. (eds) Foundations of Biomedical Knowledge Representation. Lecture Notes in Computer Science(), vol 9521. Springer, Cham. https://doi.org/10.1007/978-3-319-28007-3_14

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-28007-3_14

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-28006-6

  • Online ISBN: 978-3-319-28007-3

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics