Abstract
This chapter provides an overview of live imaging and video bioinformatics. It introduces the term of video bioinformatics and provides motivation for a deeper understanding of dynamic living processes in life sciences. It outlines computational challenges in understanding dynamic biological processes and a conceptual way of addressing them. The themes covered in the book range from oragnaismal dynamics to intercellular and intracellular dynamics with associated software systems. This chapter gives an overview of different parts of the book and a synopsis of each subsequent chapter.
This is a preview of subscription content, log in via an institution to check access.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
(2003) Science. Spec Iss Biol Imag 300:76–102, 4 April 2003
(2002) Mathematics in imaging. Spec Iss IEEE Signal Process Mag 19(5), Sept 2002
Murphy RF, Meijering E, Danuser G (2005) Guest editorial. IEEE Trans Image Process (Spec Iss Mol Cell Bioimag) 14, Sept 2005. Also see IEEE Signal Process Mag, May 2006
Swedlow JR, Goldberg I, Brauner E, Sorger PK (2003) Informatics and quantitative analysis in biological imaging. Science 300:100–102
(2012) Nat Methods 9(7):676–682
Tsien RY (2003) Imagining imaging’s future. Nat Rev Mol Cell Biol 4:SS16–SS21
Danckaert A et al (2002) Automated recognition of intracellular organelles in confocal microscope images. Traffic 3:66–73
Gerlich D, Mattes J, Elis R (2003) Quantitative motion analysis and visualization of cellular structures. Methods 29:3–13
Huang K, Murphy RF (2004) From quantitative microscopy to automated image understanding. J Biomed Opt 9:893–912
Marx V (2002) Beautiful bioimaging for the eyes of many beholders. Science, July 2002
Parvin B, Yang Q, Fontenay G, Barcellos-Hoff MH (2002) BioSig: an imaging bioinformatic system for studying phenomics. IEEE Comput 65–71, July 2002
Sabri S, Richelme F, Pierres A, Benoliel A-M, Bongrand P (1997) Interest of image processing in cell biology and immunology. J Immunol Methods 208:1–27
Agarwal PK et al (2002) Algorithmic issues in modeling motion. ACM Comput Surv 34
Bray D (2001) Cell movements: from molecules to motility. Garland, New York
Lackie JM (1986) Cell movement and cell behavior. Allen & Unwin, Boston
Murase M (1992) Dynamics of cellular motility. Wiley, New York
Pal SK, Bandyopadhyay S, Ray SS Evolutionary computation in bioinformatics: a review. IEEE Trans Syst Man Cyber Part C 36(5):601–615
Fogel GB, Bullinger E, Su S-F, Azuaje F (2008) Special section on machine intelligence approaches to systems biology. IEEE Trans Syst Man Cyber 38(1), Feb 2008
Cohen J (2004) Bioinformatics—an introduction for computer scientists. ACM Comput Surv 36:122–158
Interview with Knuth. http://www-helix.stanford.edu/people/altman/bioinformatics.html
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2015 Springer International Publishing Switzerland
About this chapter
Cite this chapter
Bhanu, B., Talbot, P. (2015). Live Imaging and Video Bioinformatics. In: Bhanu, B., Talbot, P. (eds) Video Bioinformatics. Computational Biology, vol 22. Springer, Cham. https://doi.org/10.1007/978-3-319-23724-4_1
Download citation
DOI: https://doi.org/10.1007/978-3-319-23724-4_1
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-319-23723-7
Online ISBN: 978-3-319-23724-4
eBook Packages: Computer ScienceComputer Science (R0)