Abstract
We present our experience with technology for developing virtual machines and virtual appliances. Our goal is to facilitate scientific workflow sharing and analysis for scientific investigation using virtual machine technology. Our work is in the context of a larger effort on building an efficient data sharing and analysis network for data providers as well as scientific investigators in the domain of Alzheimer’s Disease (AD) research.
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References
Foster, I., Kesselman, C., Tuecke, S.: The anatomy of the grid: enabling scalable virtual organisations. Int. J. High Perform. Comput. Appl. 15(3), 200–222 (2001)
Dinov, I., et al.: Neuroimaging study designs, computational analyses and data provenance using the LONI pipeline. PloS one 5(9), e13070 (2010)
Wolstencroft, K., Haines, R., Fellows, D., Williams, A., Withers, D., Owen, S., Soiland-Reyes, S., Dunlop, I., Nenadic, A., Fisher, P., Bhagat, J., Belhajjame, K., Bacall, F., Hardisty, A., Nieva de la Hidalga, A., Balcazar Vargas, M.P., Sufi, S., Goble, C.: The Taverna workflowsuite: designing and executing workflows of Web Services on the desktop, web or in the cloud. Nucleic Acids Res. 41(W1), W557–W561 (2013)
Deelman, E., Gil, Y.: Managing large-scale scientific workflows in distributed environments: experiences and challenges. In: E-Science 2006: Proceedings of the Second IEEE International Conference on e-Science and Grid Computing, p. 144. IEEE Computer Society, Washington, DC (2006)
Barseghian, D., et al.: Workflows and extensions to the Kepler scientific workflow system to support environmental sensor data access and analysis. Ecol. Inform. 5(1), 42–50 (2010)
Singh, M.P., Vouk, M.A.: Scientific workflows: scientific computing meets transactional workflows. In: NSF Workshop on Workflow and Process Automation in Information Systems: State of the Art and Future Directions (1996)
Bresnahan, J., et al.: Globus GridFTP: what’s new in 2007. In: Proceedings of the First International Conference on Networks for Grid Applications. ICST (Institute for ComputerSciences, Social-Informatics and Telecommunications Engineering) (2007)
Neu, S.C., Crawford, K.L., Toga, A.W.: Practical management of heterogeneous neuroimaging metadata by global neuroimaging data repositories. Front. Neuroinformatics 6, 8 (2012). PMCID: 3311229
Van Steen, M., Homburg, P., Andrew, S.T.: Globe: a wide-area distributed system. IEEE Concurrency 7(1), 70–78 (1999)
Juve, G., Deelman, E.: Scientific workflows and clouds. Crossroads 16(3), 14–18 (2010)
Taylor, I.J., et al.: Workflows for E-Science: Scientific Workflows for Grids. Springer, London (2014)
Lampoudi, S.: The Path to Virtual Machine Images as First Class Provenance. Age, USA (2011)
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Patawari, A. (2015). GAAIN Virtual Appliances: Virtual Machine Technology for Scientific Data Analysis. In: Ashish, N., Ambite, JL. (eds) Data Integration in the Life Sciences. DILS 2015. Lecture Notes in Computer Science(), vol 9162. Springer, Cham. https://doi.org/10.1007/978-3-319-21843-4_21
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DOI: https://doi.org/10.1007/978-3-319-21843-4_21
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