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Software

Chapter
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Part of the SpringerBriefs in Computer Science book series (BRIEFSCOMPUTER)

Abstract

This chapter introduces the software implementing the ideas presented in the Method chapter. It covers installation, usage and result interpretation of the software.

Keywords

MRFalign MRFsearch P-value 

References

  1. 1.
    Jones, D.T.: Protein secondary structure prediction based on position-specific scoring matrices. J. Mol. Biol. 292(2), 195–202 (1999)CrossRefGoogle Scholar
  2. 2.
    Wang, Z., et al.: Protein 8-class secondary structure prediction using conditional neural fields. Proteomics 11(19), 3786–3792 (2011)CrossRefGoogle Scholar
  3. 3.
    Jones, D.T., Ward, J.J.: Prediction of disordered regions in proteins from position specific score matrices. Proteins Struct. Funct. Bioinf. 53(S6), 573–578 (2003)CrossRefGoogle Scholar

Copyright information

© The Author(s) 2015

Authors and Affiliations

  1. 1.Toyota Technological InstituteChicagoUSA

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