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Monitoring Plant Nutritional Status

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Nutrient Use Efficiency in Plants

Part of the book series: Plant Ecophysiology ((KLEC,volume 10))

Abstract

Methods and techniques effective in achieving yield objectives, optimizing the use of resources and preventing environmental contamination are defined as agronomic Best Management Practices (BMPs). Considering fertilisations BMPs pursue the aims to match mineral nutrient supply with crop requirements, minimizing their losses from the field. If spatial and temporal information about crop needs were available, precision fertilisation approaches could be planned in order to increase fertiliser use efficiency and to improve some economic and environmental aspects related to the crop systems. The state of the art and the research perspectives on the fine tuning of optical devices allowing proximal or remote sensing at sub-field scale of crops traits related to plant nutritional status, as well as on the exploitation of the gene fusion concept in developing transgenic bioindicators monitoring the nutritional status of the plants are here reviewed and discussed. Concerning the latter aspect particular attention is paid to the development of synthetic promoters conferring to the biondicator nutrient specificity and also able to target the expression of the associated reporter genes in organs in which their signals should be early and easily detectable.

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References

  • Adamchuck VI, Viscarra Rossel RA, Sudduth KA, Lammers PS (2011) Sensor fusion for precision agriculture. In: Thomas C (ed) Sensors fusion-foundation and applications. InTech Publishers, Croatia, pp 27–40

    Google Scholar 

  • Adams JP, Topsakal E, Yuceer C (2011) Fluorescing phytosensors: a speculated next step for environmental monitoring. Plant Mol Biol Biotechnol 2:16–25

    Google Scholar 

  • Asner GP, Martin RE (2008) Airborne spectranomics: mapping canopy chemical and taxonomic diversity in tropical forests. Front Ecol Environ 7:269–278

    Article  Google Scholar 

  • Awazuhara M, Kim H, Goto DB, Matsui A, Hayashi H, Chino M, Kim SG, Naito S, Fujiwara T (2002) A 235-bp region from a nutritionally regulated soybean seed-specific gene promoter can confer its sulfur and nitrogen response to a constitutive promoter in aerial tissues of Arabidopsis thaliana. Plant Sci 163:75–82

    Article  CAS  Google Scholar 

  • Barker AV, Pilbeam DJ (2007) In: Baker AV, Pilbeam DJ (eds) Handbook of plant nutrition. CRC Publisher, Boca Raton, pp 3–18

    Google Scholar 

  • Bi YM, Wang RL, Zhu T, Rothstein SJ (2007) Global transcription profiling reveals differential responses to chronic nitrogen stress and putative nitrogen regulatory components in Arabidopsis. BMC Genomics 8:281

    Article  PubMed Central  PubMed  Google Scholar 

  • Brunetti C, George RM, Tattini M, Field K, Davey MP (2013) Metabolomics in plant environmental physiology. J Exp Bot 64:4011–4020

    Article  CAS  PubMed  Google Scholar 

  • Cartelat A, Cerovic ZG, Goulas Y, Meyer S, Lelarge C, Prioul JL, Barbottien A, Jeuffroy MH, Gate P, Agati G, Moja I (2005) Optically assessed contents of leaf polyphenolics and chlorophyll as indicators of nitrogen deficiency in wheat (Triticum aestivum L.). Field Crop Res 91:35–49

    Article  Google Scholar 

  • Craswell ET, Godwin DC (1984) The efficiency of nitrogen fertilizers applied to cereals grown in different climates. In: Tinker PB, Luachli A (eds) Advances in plant nutrition, vol 1. Praeger Publisher, New York, pp 1–55

    Google Scholar 

  • de Ruijter NCA, Verhees J, van Leeuwen W, van der Krol AR (2003) Evaluation and comparison of the GUS, LUC, and GFP reporter system for gene expression studies in plants. Plant Biol 5:103–115

    Article  Google Scholar 

  • Debaeke P, Rouet P, Justes E (2006) Relationship between the normalized SPAD index and the nitrogen nutrition index: application to durum wheat. J Plant Nutr 29:75–92

    Article  CAS  Google Scholar 

  • Diacono M, Rubino P, Montemurro F (2013) Precision N management of wheat. A review. Agron Sustain Dev 33:219–241

    Article  Google Scholar 

  • Erdle K, Mistele B, Schmidhalter U (2011) Comparison of active and passive spectral sensors in discriminating biomass parameters and nitrogen status in wheat cultivars. Field Crop Res 124:74–84

    Article  Google Scholar 

  • Fang RX, Nagy F, Sivasubramaniam S, Chua NH (1989) Multiple cis regulatory elements for maximal expression of the cauliflower mosaic virus 35S promoter in transgenic plants. Plant Cell 1:141–150

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Gallagher SR (1992) GUS protocols: using the GUS gene as a reporter of gene expression. Academic, San Diego, pp 1–221

    Book  Google Scholar 

  • Godfray HCJ, Beddington JR, Crute IR, Haddad L, Lawrence D, Muir JF, Pretty J, Robinson S, Thomas SM, Toulmin C (2010) Food security: the challenge of feeding 9 billion people. Science 327:812–818

    Article  CAS  PubMed  Google Scholar 

  • Gojon A, Nacry P, Davidian JC (2009) Root uptake regulation: a central process for NPS homeostasis in plants. Curr Opin Plant Biol 12:328–338

    Article  CAS  PubMed  Google Scholar 

  • Gowik U, Burscheidt J, Akyildiz M, Schlue U, Koczor M, Streubel M, Westhoff P (2004) Cis-regulatory elements for mesophyll-specific gene expression in the C4 plant Flaveria trinervia, the promoter of the C4 phosphoenolpyruvate carboxylase gene. Plant Cell 16:1077–1090

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Greenwood DJ, Neeteson JJ, Draycott A (1986) Quantitative relationships for the dependence of growth rate of arable crops on their nitrogen content, dry weight and aerial environment. Plant Soil 91:281–301

    Article  Google Scholar 

  • Hamilton J, Zangerl A, DeLucia E, Berenbaum M (2001) The carbon-nutrient balance hypothesis: its rise and fall. Ecol Lett 4:86–95

    Article  Google Scholar 

  • Hammond JP, Bennett MJ, Bowen HC, Broadley MR, Eastwood DC, May ST, Rahn C, Swarup R, Woolaway KE, White PJ (2003) Changes in gene expression in Arabidopsis shoots during phosphate starvation and the potential for developing smart plants. Plant Physiol 132:578–596

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Hansen PM, Schjoerring JK (2003) Reflectance measurement of canopy biomass and nitrogen status in wheat crops using normalized difference vegetation indices and partial least squares regression. Remote Sens Environ 86:542–553

    Article  Google Scholar 

  • Harper BK, Stewart CN (2000) Patterns of green fluorescent protein expression in transgenic plants. Plant Mol Biol Report 18:141a–141i

    Article  Google Scholar 

  • Haseloff J, Siemering KR, Prasher DC, Hodge S (1997) Removal of a cryptic intron and subcellular localization of green fluorescent protein are required to mark transgenic Arabidopsis plants brightly. Proc Natl Acad Sci U S A 94:2122–2127

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Hawkesford MJ (2000) Plant responses to sulphur deficiency and the genetic manipulation of sulphate transporters to improve S-utilization efficiency. J Exp Bot 51:131–138

    Article  CAS  PubMed  Google Scholar 

  • Heim R, Prasher DC, Tsien RY (1994) Wavelength mutations and posttranslational autoxidation of green fluorescent protein. Proc Natl Acad Sci U S A 91:12501–12504

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Jefferson RA (1989) The GUS reporter gene system. Nature 342:837–838

    Article  CAS  PubMed  Google Scholar 

  • Jefferson RA (1993) Beyond model systems: new strategies, methods, and mechanisms for agricultural research. Ann N Y Acad Sci 700:53–73

    Article  CAS  PubMed  Google Scholar 

  • Kalra YP (1998) Handbook of reference methods for plant analysis. CRC Press, Boca Raton

    Google Scholar 

  • Kamiya T, Yamagami M, Hirai MY, Fujiwara T (2012) Establishment of an in planta magnesium monitoring system using CAX3 promoter-luciferase in Arabidopsis. J Exp Bot 63:355–363

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Kant S, Bi YM, Rothstein SJ (2010) Understanding plant response to nitrogen limitation for the improvement of crop nitrogen use efficiency. J Exp Bot 62:1499–1509

    Article  PubMed  Google Scholar 

  • Knyazikhin Y, Schull MA, Stenberg P, Mõttus M, Rautiainen M, Yang Y, Marshak A, Carmona PL, Kaufmann RK, Lewis P, Disney MI, Vanderbilt V, Davis AB, Baret F, Jacquemoud S, Lyapustin A, Myneni RB (2013) Hyperspectral remote sensing of foliar nitrogen content. Proc Natl Acad Sci U S A 110:E185–E192

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Konishi M, Yanagisawa S (2010) Identification of a nitrate-responsive cis-element in the Arabidopsis NIR1 promoter defines the presence of multiple cis-regulatory elements for nitrogen response. Plant J 63:269–282

    Article  CAS  PubMed  Google Scholar 

  • Krizek BA, Prost V, Joshi RM, Stoming T, Glenn TC (2003) Developing transgenic Arabidopsis plants to be metal-specific bioindicators. Environ Toxicol Chem 22:175–181

    Article  CAS  PubMed  Google Scholar 

  • Kutz A, Muller A, Hennig P, Kaiser WM, Piotrowski M, Weiler EW (2002) A role for nitrilase 3 in the regulation of root morphology in sulphur-starving Arabidopsis thaliana. Plant J 30:95–106

    Article  CAS  PubMed  Google Scholar 

  • Lappartient AG, Touraine B (1997) Glutathione-mediated regulation of ATP sulfurylase activity, SO4 2− uptake, and oxidative stress response in intact canola roots. Plant Physiol 114:177–183

    CAS  PubMed Central  PubMed  Google Scholar 

  • Lappartient AG, Vidmar JJ, Leustek T, Glass AMD, Touraine B (1999) Inter-organ signalling in plants: regulation of ATP sulfurylase and sulfate transporter genes expression in roots mediated by phloem-translocated compound. Plant J 18:89–95

    Article  CAS  PubMed  Google Scholar 

  • Lea US, Slimestad R, Smedvig P, Lillo C (2007) Nitrogen deficiency enhances expression of specific MYB and bHLH transcription factors and accumulation of end products in the flavonoids pathway. Planta 225:1245–1253

    Article  CAS  PubMed  Google Scholar 

  • Lemaire G, Gastal F (2009) Quantifying crop responses to nitrogen deficiency and avenues to improve nitrogen use efficiency. In: Sadras VO, Calderini DF (eds) Crop physiology: applications for genetic improvement and agronomy. Elsevier Publisher, Adelaide, pp 171–211

    Chapter  Google Scholar 

  • Li L, Liu C, Lian X (2010) Gene expression profiles in rice roots under low phosphorus stress. Plant Mol Biol 72:423–432

    Article  CAS  PubMed  Google Scholar 

  • Lu C, Zhang J (2000) Photosynthetic CO2 assimilation, chlorophyll fluorescence and photoinhibition as affected by nitrogen deficiency in maize plants. Plant Sci 151:135–143

    Article  CAS  PubMed  Google Scholar 

  • Ma TL, Wu WH, Wang Y (2012) Transcriptome analysis of rice root responses to potassium deficiency. BMC Plant Biol 12:161

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Malhi BS, Haderlein LK, Pauly DG, Johnston AM (2002) Improving fertilizer phosphorus use efficiency. Better Crop 86:8–9

    Google Scholar 

  • Maruyama-Nakashita A, Inoue E, Watanabe-Takahashi A, Yamaya T, Takahashi H (2003) Transcriptome profiling of sulfur-responsive genes in Arabidopsis reveals global effects of sulfur nutrition on multiple metabolic pathways. Plant Physiol 132:597–605

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Maruyama-Nakashita A, Nakamura Y, Watanabe-Takahashi A, Inoue E, Yamaya T, Takahashi H (2005) Identification of a novel cis-acting element conferring sulfur deficiency response in Arabidopsis roots. Plant J 42:305–314

    Article  CAS  PubMed  Google Scholar 

  • Maruyama-Nakashita A, Nakamura Y, Tohge T, Saito K, Takahashi H (2006) Arabidopsis SLIM1 is a central transcriptional regulator of plant sulfur response and metabolism. Plant Cell 18:3235–3251

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Mena MA, Treynor TP, Mayo SL, Daugherty PS (2006) Blue fluorescent proteins with enhanced brightness and photostability from a structurally targeted library. Nat Biotechnol 24:1569–1571

    Article  CAS  PubMed  Google Scholar 

  • Millwood RJ, Halfhill MD, Harkins D, Russotti R, Stewart CN (2003) Instrumentation and methodology for quantifying GFP fluorescence in intact plant organs. Biotechniques 34:638–643

    CAS  PubMed  Google Scholar 

  • Novina CD, Roy AL (1996) Core promoters and transcriptional control. Trends Genet 12:351–355

    Article  CAS  PubMed  Google Scholar 

  • Odell JT, Nagy F, Chua NH (1985) Identification of DNA sequences required for activity of the cauliflower mosaic virus 35S promoter. Nature 313:810–812

    Article  CAS  PubMed  Google Scholar 

  • Ollinger SV, Richardson AD, Martin ME, Hollinger DY, Frolking SE, Reich PB, Plourd LC, Katul GG, Munger JW, Oren R, Smith ML, Paw UKT, Bolstad PV, Cook BD, Day MC, Martin TA, Monson RK, Schmid HP (2008) Canopy nitrogen, carbon assimilation, and albedo in temperate and boreal forests: functional relations and potential climate feedbacks. Proc Natl Acad Sci U S A 105:19336–19341

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Pierce FJ, Nowak P (1999) Aspects of precision agriculture. In: Sparks DL (ed) Advances in agronomy. Academic Press, New York, pp 1–85

    Google Scholar 

  • Price J, Laxmi A, St Martin SK, Jang JC (2004) Global transcription profiling reveals multiple sugar signal transduction mechanisms in Arabidopsis. Plant Cell 16:2128–2150

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Raun WR, Johnson GV (1999) Improving nitrogen use efficiency for cereal production. Agron J 91:357–363

    Article  Google Scholar 

  • Rengel Z, Damon PM (2008) Crops and genotypes differ in efficiency of potassium uptake and use. Physiol Plant 133:624–636

    Article  CAS  PubMed  Google Scholar 

  • Rouached H, Secco D, Arpa BA (2010) Regulation of ion homeostasis in plants: current approaches and future challenges. Plant Sign Behav 5:501–502

    Article  Google Scholar 

  • Samborski SM, Tremblay N, Fallon E (2009) Strategies to make use of plant sensors-based diagnostic information for nitrogen recommendations. Agron J 101:800–816

    Article  CAS  Google Scholar 

  • Schatchtman DP, Shin R (2007) Nutrient sensing and signalling: NPKS. Annu Rev Plant Biol 58:47–69

    Article  Google Scholar 

  • Schlemmer MR, Francis DD, Shanahan JF, Schepers JS (2005) Remotely measuring chlorophyll content in corn leaves with differing nitrogen levels and relative water content. Agron J 97:106–112

    Article  CAS  Google Scholar 

  • Shangguan XX, Xu B, Yu ZX, Wang LJ, Chen XY (2008) Promoter of a cotton fiber MYB gene functional in trichomes of Arabidopsis and glandular trichomes of tobacco. J Exp Bot 59:3533–3542

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Shigaki T, Hirschi K (2000) Characterization of CAX-like genes in plants: implications for functional diversity. Gene 257:291–298

    Article  CAS  PubMed  Google Scholar 

  • Siemering KR, Golbik R, Sever R, Haseloff J (1996) Mutations that suppress the thermosensitivity of green fluorescent protein. Curr Biol 6:1653–1663

    Article  CAS  PubMed  Google Scholar 

  • Solari F, Shanahan JF, Ferguson R, Schepers JS, Gitelson A (2008) Active sensor reflectance measurements of corn nitrogen status and yield potential. Agron J 100:571–579

    Article  CAS  Google Scholar 

  • Spiess E, Bestvater F, Heckel-Pompey A, Toth K, Hacker M, Stobrawa G, Feurer T, Wotzlaw C, Berchner-Pfannschmidt U, Porwol T, Acker H (2005) Two-photon excitation and emission spectra of the green fluorescent protein variants ECFP, EGFP and EYFP. J Microsc 217:200–204

    Article  CAS  PubMed  Google Scholar 

  • Stewart CN (2001) The utility of green fluorescent protein in transgenic plants. Plant Cell Rep 20:376–382

    Article  CAS  PubMed  Google Scholar 

  • Stroppiana D, Boschetti M, Brivio PA, Bocchi S (2009) Plant nitrogen concentration in paddy rice from field canopy hyperspectral radiometry. Field Crop Res 111:119–129

    Article  Google Scholar 

  • Tremblay N, Wang Z, Cerovic ZC (2012) Sensing crop nitrogen status with fluorescence indicators. A review. Agron Sustain Dev 32:451–464

    Article  CAS  Google Scholar 

  • Tsien RY (1998) The green fluorescent protein. Annu Rev Biochem 67:509–544

    Article  CAS  PubMed  Google Scholar 

  • Venter M (2007) Synthetic promoters: genetic control through cis engineering. Trends Plant Sci 12:118–124

    Article  CAS  PubMed  Google Scholar 

  • Wang R, Okamoto M, Xing X, Crawford NM (2003) Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1,000 rapidly responding genes and new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism. Plant Physiol 132:556–567

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Wang R, Tischner R, Gutiérrez RA, Hoffman M, Xing X, Chen M, Coruzzi G, Crawford NM (2004) Genomic analysis of the nitrate response using a nitrate reductase-null mutant of Arabidopsis. Plant Physiol 136:2512–2522

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Yang XS, Wu J, Ziegler TE, Yang X, Zayed A, Rajani MS, Zhou D, Basra AS, Schachtman DP, Peng M, Armstrong CL, Caldo RA, Morrell JA, Lacy M, Staub JM (2011) Gene expression biomarkers provide sensitive indicators of in planta nitrogen status in maize. Plant Physiol 157:1841–1852

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Ye R, Zhou F, Lin Y (2012) Two novel positive cis-regulatory elements involved in green tissue-specific promoter activity in rice (Oryza sativa L ssp.). Plant Cell Rep 31:1159–1172

    Article  CAS  PubMed  Google Scholar 

  • Yoshida K, Shinmyo A (2000) Transgene expression systems in plant, a natural bioreactor. J Biosci Bioeng 90:353–362

    Article  CAS  PubMed  Google Scholar 

  • Zheng G, Moskal LM (2009) Retrieving leaf area index (LAI) using remote sensing: theories, methods and sensors. Sensors 9:2719–2745

    Article  PubMed Central  PubMed  Google Scholar 

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Correspondence to Gian Attilio Sacchi .

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Maghrebi, M., Nocito, F.F., Sacchi, G.A. (2014). Monitoring Plant Nutritional Status. In: Hawkesford, M., Kopriva, S., De Kok, L. (eds) Nutrient Use Efficiency in Plants. Plant Ecophysiology, vol 10. Springer, Cham. https://doi.org/10.1007/978-3-319-10635-9_10

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