Skip to main content

MedVir: An Interactive Representation System of Multidimensional Medical Data Applied to Traumatic Brain Injury’s Rehabilitation Prediction

  • Conference paper
Book cover Rough Sets and Intelligent Systems Paradigms

Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 8537))

  • 1039 Accesses

Abstract

Clinicians could model the brain injury of a patient through his brain activity. However, how this model is defined and how it changes when the patient is recovering are questions yet unanswered. In this paper, the use of MedVir framework is proposed with the aim of answering these questions. Based on complex data mining techniques, this provides not only the differentiation between TBI patients and control subjects (with a 72% of accuracy using 0.632 Bootstrap validation), but also the ability to detect whether a patient may recover or not, and all of that in a quick and easy way through a visualization technique which allows interaction.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Blum, A.L., Langley, P.: Selection of relevant features and examples in machine learning. Artificial Intelligence 97, 245–271 (1997)

    Article  MathSciNet  Google Scholar 

  2. Jeffery, I.B., Higgins, D.G., Culhane, A.C.: Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data. BMC Bioinformatics 7, 359+ (2006)

    Google Scholar 

  3. Kohavi, R., John, G.H.: Wrappers for feature subset selection. Artificial Intelligence 97, 273–324 (1997)

    Article  Google Scholar 

  4. Ni, B., Liu, J.: A hybrid filter/wrapper gene selection method for microarray classification. In: Proceedings of 2004 International Conference on Machine Learning and Cybernetics, vol. 4, pp. 2537–2542. IEEE (2004)

    Google Scholar 

  5. Inza, I., Larrañaga, P., Blanco, R., Cerrolaza, A.J.: Filter versus wrapper gene selection approaches in dna microarray domains. Artificial Intelligence in Medicine 31, 91–103 (2004)

    Article  Google Scholar 

  6. Keim, D.A.: Information Visualization and Visual Data Mining. IEEE Transactions on Visualization and Computer Graphics 8, 1–8 (2002)

    Article  Google Scholar 

  7. Keim, D.A., Kriegel, H.P.: Visualization Techniques for Mining Large Databases: A Comparison. Transactions on Knowledge and Data Engineering, Special Issue on Data Mining 8, 923–938 (1996)

    Article  Google Scholar 

  8. Hartigan, J.: Printer graphics for clustering. Journal of Statistical Computation and Simulation 4, 187–213 (1975)

    Article  Google Scholar 

  9. Furnas, G.W., Buja, A.: Prosection Views: Dimensional Inference through Sections and Projections. Journal of Computational and Graphical Statistics 3, 323–385 (1994)

    MathSciNet  Google Scholar 

  10. Inselberg, A.: Multidimensional Detective. In: Proceedings of the 1997 IEEE Symposium on Information Visualization, INFOVIS 1997, pp. 100–107. IEEE Computer Society, Washington, DC (1997)

    Google Scholar 

  11. Beddow, J.: Shape Coding of Multidimensional Data on a Microcomputer Display. In: IEEE Visualization, pp. 238–246 (1990)

    Google Scholar 

  12. Peano, G.: Sur une courbe, qui remplit toute une aire plane. Mathematische Annalen 36, 157–160 (1890)

    Article  MathSciNet  Google Scholar 

  13. Keim, D.A., Ankerst, M., Kriegel, H.P.: Recursive Pattern: A Technique for Visualizing Very Large Amounts of Data. In: Proceedings of the 6th Conference on Visualization 1995, VIS 1995, pp. 279–286. IEEE Computer Society, Washington, DC (1995)

    Google Scholar 

  14. Keim, D.A., Krigel, H.P.: VisDB: Database Exploration Using Multidimensional Visualization. IEEE Comput. Graph. Appl. 14, 40–49 (1994)

    Article  Google Scholar 

  15. Mihalisin, T., Gawlinski, E., Timlin, J., Schwegler, J.: Visualizing a Scalar Field on an N-dimensional Lattice. In: Proceedings of the 1st Conference on Visualization 1990, VIS 1990, pp. 255–262. IEEE Computer Society Press, Los Alamitos (1990)

    Google Scholar 

  16. LeBlanc, J., Ward, M.O., Wittels, N.: Exploring N-dimensional Databases. In: Proceedings of the 1st Conference on Visualization 1990, VIS 1990, pp. 230–237. IEEE Computer Society Press, Los Alamitos (1990)

    Google Scholar 

  17. de Oliveira, M.C.F., Levkowitz, H.: From Visual Data Exploration to Visual Data Mining: A Survey. IEEE Trans. Vis. Comput. Graph. 9, 378–394 (2003)

    Article  Google Scholar 

  18. Chernoff, H.: The Use of Faces to Represent Points in K-Dimensional Space Graphically. Journal of the American Statistical Association 68, 361–368 (1973)

    Article  Google Scholar 

  19. Chambers, J., Cleveland, W., Kleiner, B., Tukey, P.: Graphical Methods for Data Analysis. The Wadsworth Statistics/Probability Series. Duxury, Boston (1983)

    MATH  Google Scholar 

  20. Lee, J.A., Verleysen, M.: Nonlinear dimensionality reduction. Springer, New York (2007)

    Book  Google Scholar 

  21. Wang, J.: Geometric Structure of High-dimensional Data and Dimensionality Reduction. Higher Education Press (2012)

    Google Scholar 

  22. Gracia, A., González, S., Robles, V., Menasalvas, E.: A methodology to compare Dimensionality Reduction algorithms in terms of loss of quality. Information Sciences (2014)

    Google Scholar 

  23. Speed, T.: Statistical analysis of gene expression microarray data. CRC Press (2004)

    Google Scholar 

  24. Hall, M., Frank, E., Holmes, G., Pfahringer, B., Reutemann, P., Witten, I.H.: The weka data mining software: an update. ACM SIGKDD Explorations Newsletter 11, 10–18 (2009)

    Article  Google Scholar 

  25. Witten, I.H., Frank, E.: Data Mining: Practical Machine Learning Tools and Techniques, 2nd edn. Morgan Kaufmann Series in Data Management Systems. Morgan Kaufmann Publishers Inc., San Francisco (2005)

    MATH  Google Scholar 

  26. Efron, B., Tibshirani, R.: Improvements on cross-validation: the 632+ bootstrap method. Journal of the American Statistical Association 92, 548–560 (1997)

    MathSciNet  MATH  Google Scholar 

  27. Kandogan, E.: Visualizing multi-dimensional clusters, trends, and outliers using star coordinates. In: KDD 2001: Proceedings of the Seventh ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, pp. 107–116. ACM, New York (2001)

    Google Scholar 

  28. Castellanos, N.P., Paul, N., Ordonez, V.E., Demuynck, O., Bajo, R., Campo, P., Bilbao, A., Ortiz, T., del Pozo, F., Maestu, F.: Reorganization of functional connectivity as a correlate of cognitive recovery in acquired brain injury. Brain Journal 133, 2365–2381 (2010)

    Article  Google Scholar 

  29. Mallat, S.: A Wavelet Tour of Signal Processing, The Sparse Way, 3rd edn. Academic Press (2008)

    Google Scholar 

  30. Torrence, C., Compo, G.P.: A practical guide to wavelet analysis. Bull. Am. Meteorol. Soc. 79, 61–78 (1998)

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2014 Springer International Publishing Switzerland

About this paper

Cite this paper

Gonzalez, S., Gracia, A., Herrero, P., Castellanos, N., Paul, N. (2014). MedVir: An Interactive Representation System of Multidimensional Medical Data Applied to Traumatic Brain Injury’s Rehabilitation Prediction. In: Kryszkiewicz, M., Cornelis, C., Ciucci, D., Medina-Moreno, J., Motoda, H., Raś, Z.W. (eds) Rough Sets and Intelligent Systems Paradigms. Lecture Notes in Computer Science(), vol 8537. Springer, Cham. https://doi.org/10.1007/978-3-319-08729-0_24

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-08729-0_24

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-08728-3

  • Online ISBN: 978-3-319-08729-0

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics