Abstract
To many workers in the field, the classical multilocus fingerprinting approaches based on the electrophoretic separation of DNA restriction fragments followed by probing with suitable probes is now an obsolete methodology. This is because such procedures are laborious, require much technical skill, depend on high molecular weight DNA to start with and do not easily lend themselves to automation and electronic data storage. Multilocus DNA fingerprinting also requires a different statistical approach than single locus profiling (see the chapter of Krawczak, this volume). For three main reasons, however, this approach should remain in the discussion: (1) It is the method in kinship testing and trace analysis work least likely to unravel unwanted additional information on other personal genetic traits: other than with single locus techniques, the assignment of multilocus DNA fingerprint bands to alleles to loci is not obvious. (2) The shortcomings listed above are not unsurmountable in principle; technological progress may, at some future time, manage to overcome the deficits while retaining the benefits. (3) Some multilocus DNA systems work well beyond the species on which they have been developed, which is due to the fact that the target sequences of many multilocus DNA probes are both conserved and variable throughout the plant and animal kingdoms.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Jeffreys AJ, Wilson V, Thein SL (1985) Hypervariable “minisatellite” regions in human DNA. Nature 314: 67–73
Jeffreys AJ, Wilson V, Thein SL (1985) Individual-specific “fingerprints” of human DNA. Nature 316: 76–79
Ali S, Müller CR, Epplen JT (1986) DNA fingerprinting human genomes by oligonucleotide probes specific for simple repetitive DNA sequences. Hum Genet 74: 239–243
Owerbach D, Aagaard L (1984) Analysis of a 1963-bp polymorphic region flanking the human insulin gene. Gene 32: 475–479
Jeffreys AJ, MacLeod A, Tamaki K, Neil DL, Monckton DG (1991) Minisatellite repeat coding as a digital approach to DNA typing. Nature 354: 204–209
Krawczak M, Schmidtke J (1998) DNA Fingerprinting 2nd ed. Bios Publishers, Oxford
Vassart G, Georges M, Monsieur R, Brocas H, Lequarre AS, Christophe D (1987) A sequence in M13 phage detects hypervariable minisatellites in human and animal DNA. Science 235: 683–684
Fowler SJ, Gill P, Werret DJ, Higgs DR (1988) Individual specific DNA fingerprints from a hypervariable region probe: alpha-globin 3’HVR. Hum Genet 79: 142–146
Pena SDJ, Macedo AM, Braga VMM, Rumjanek FD, Simpson AJ (1990) F10, the gene for the glycine-rich major egshell protein of Schistosoma mansoni recognizes a family of hypervariable minisatellites in the human genome. Nucleic Acids Res 18:7466
Georges M, Cochaux P, Lequarre AS, Young MW, Vassart G (1987) DNA fingerprinting in man using a mouse probe related to part of the Drosophila “Per” gene. Nucleic Acids Res 15: 7193
Singh L, Purdom IF, Jones KW (1981) Conserved sex-chromosome-associated nucleotide sequences in eukaryotes. Cold Spring Harbor Symp Quant Biol 45: 805–814
Epplen JT, McCarrey JR, Sutou S, Ohno S (1982) Base sequence of a cloned snake W-chromosome DNA fragment and identification of a male-specific putative mRNA in the mouse. Proc Natl Acad Sci USA 79: 3798–3802
Schäfer R, Zischler H, Birsner U, Becker A, Epplen JT (1988) Optimized oligonucleotide probes for DNA fingerprinting. Electrophoresis 9: 369–374
Krawczak M, Böhm I, Nürnberg P, Hampe J, Hundrieser J, Pöche H, Peters C, Slomski R, Kwiatkowska J, Nagy M et al (1993) Paternity testing with oligonucleotide multilocus probe (CAQs/fGTQs: a multicenter study. Forens Sci Int 59: 101–117
Papiha SS, Sertedaki A (1995) Oligonucleotide (CAC)5 fingerprinting: validity and reliability in paternity testing. Electrophoresis 16:1624–1626
Armour JAL, Vergnaud G, Crosier M, Jeffreys AJ (1992) Isolation of human minisatellite loci detected by synthetic tandem repeat probes: direct comparison with cloned DNA fingerprinting probes. Hum Mol Genet 1: 319–323
Jeffreys AJ, Turner M, Debenham P (1991) The efficiency of multilocus DNA fingerprint probes for individualization and establishment of family relationships, determined from extensive casework. Am J Hum Genet 48: 824–840
Jeffreys AJ, Brookfield JF, Semeonoff R (1985) Positive identification of an immigration test-case using human DNA fingerprints. Nature 317: 818–819
Gill P, Jeffreys AJ, Werrett DJ (1985) Forensic application of DNA “fingerprints”. Nature 318: 577–579
Socie G, Landman J, Gluckman E, Devergie A, Raynal B, Esperou-Bourdeau H, Brison O (1992) Short-term study of chimaerism after bone marrow transplantation for severe aplastic anaemia. Br J Haematol 80: 391–398
Stacey GN, Bolton BJ, Morgan D, Clark SA, Doyle A (1992) Multilocus DNA fingerprint analysis of cell banks: stability studies and culture identification in human B-lymphoblastoid and mammalian cell lines. Cytotechnology 8:13–20
Speth C, Epplen JT, Oberbaumer I (1991) DNA fingerprinting with oligonucleotides can differntiate cell lines derived from the same tumor. In Vitro Cell Dev Biol 27A: 646–650
Dolf G, Glowatzki ML, Gaillard C (1991) Searching for genetic markers for hereditary diseases in cattle by means of DNA fingerprinting. Electrophoresis 12: 109–112
Weising K, Ramser J, Kaemmer D, Kahl G (1994) Multilocus DNA fingerprinting and genetic relatedness in plants: a case study with banana and tomato. In: B Schierwater, B Streit, GP Wagner, R De-Salle (eds): Molecular ecology and evolution: approaches and applications. Birkhäuser, Basel, 45–59
Berard J, Nürnberg P, Epplen JT, Schmidtke J (1994) Alternative reproductive tactics and reproductive success in male rhesus macaques. Behaviour 129:177–201
Nürnberg P, Roewer L, Neitzel H, Sperling K, Pöpped A, Hundrieser J, Pöche H, Epplen C, Zischler H, Epplen JT (1989) DNA fingerprinting with the oligonucleotide probe (CAC)5/(GTG)5: somatic stability and germline mutations. Hum Genet 84: 75–78
Krawczak M, Bockel B (1991) DNA-fingerprinting: a short note on mutation rates. Hum Genet 87: 632
Krawczak M (1992) DNA-fingerprinting and mutation rates: reply to letter by Ritter. Hum Genet 89: 363–364
Nürnberg P, Sauermann U, Kayser M, Lanfer C, Manz E, Widdig A, Berard J, Bercovitch FB, Kessler M, Schmidtke J et al (1998): Paternity assessment in rhesus macaques (Macaca mulatto): multilocus DNA fingerprinting and PCR marker typing. Am J Primatol 44:1–18
Farrer LA, Cupples LA, Haines JL, Hyman B, Kukull WA, Mayeux R, Myers RH (1997) Effects of age, sex and ethnicity on the association between apolipoprotein E genotype and Alzheimer disease. A meta-analysis. JAMA 278: 1349–1356
Rabinow P (1992) Galton’s regret: of types and individuals. In: PR Billings (ed): DNA on trial. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, 5–18
Zischler H, Kammerbauer C, Studer R, Grzeschik KH, Epplen JT (1992) Dissecting (CAC)5/(GTG)5 multilocus fingerprints from man into individual locus-specific, hypervariable components. Genomics 13:983–990
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 1999 Birkhäuser Verlag
About this chapter
Cite this chapter
Schmidtke, J. (1999). Multilocus DNA Fingerprinting. In: Epplen, J.T., Lubjuhn, T. (eds) DNA Profiling and DNA Fingerprinting. Methods and Tools in Biosciences and Medicine. Birkhäuser, Basel. https://doi.org/10.1007/978-3-0348-7582-0_5
Download citation
DOI: https://doi.org/10.1007/978-3-0348-7582-0_5
Publisher Name: Birkhäuser, Basel
Print ISBN: 978-3-7643-6018-4
Online ISBN: 978-3-0348-7582-0
eBook Packages: Springer Book Archive