Skip to main content

Voxel2Hemodynamics: An End-to-End Deep Learning Method for Predicting Coronary Artery Hemodynamics

  • Conference paper
  • First Online:
Statistical Atlases and Computational Models of the Heart. Regular and CMRxRecon Challenge Papers (STACOM 2023)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 14507))

  • 306 Accesses

Abstract

Local hemodynamic forces play an essential role in determining the functional significance of coronary arterial stenosis and understanding the mechanism of coronary disease progression. Computational fluid dynamics (CFD) has been widely performed to simulate hemodynamics non-invasively from coronary computed tomography angiography (CCTA) images. However, fast and accurate computational analysis is still limited by the complex construction of patient-specific modeling and time-consuming computation. In this work, we proposed an end-to-end deep learning framework, which could predict the coronary artery hemodynamics from CCTA images. The model was trained and evaluated on the hemodynamic data obtained from 3D simulations of ideal synthetic and real datasets. Extensive experiments demonstrated that the predicted hemodynamic distributions by our method agreed well with the CFD-derived results. Quantitatively, the proposed method has the capability of predicting the fractional flow reserve with an average error of 0.5% and 2.5% for the ideal synthetic dataset and real dataset, respectively. This study demonstrates the feasibility and great potential of our end-to-end deep learning method as a fast and accurate approach for hemodynamic analysis. The code can be reached through https://github.com/lullcant/Voxel2Hemodynamic/tree/main.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 59.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 79.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Bakhshi, H., et al.: Comparative effectiveness of CT-derived atherosclerotic plaque metrics for predicting myocardial ischemia. JACC: Cardiovasc. Imaging 12(7 Part 2), 1367–1376 (2019)

    Google Scholar 

  2. Colebank, M.J., et al.: Influence of image segmentation on one-dimensional fluid dynamics predictions in the mouse pulmonary arteries. J. R. Soc. Interface 16(159), 20190284 (2019)

    Article  Google Scholar 

  3. Evans, P.C., Kwak, B.R.: Biomechanical factors in cardiovascular disease. Cardiovasc. Res. 99(2), 229–231 (2013)

    Article  Google Scholar 

  4. Gharleghi, R., Samarasinghe, G., Sowmya, A., Beier, S.: Deep learning for time averaged wall shear stress prediction in left main coronary bifurcations. In: 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI), pp. 1–4. IEEE (2020)

    Google Scholar 

  5. Gheorghiade, M., Bonow, R.O.: Chronic heart failure in the United States: a manifestation of coronary artery disease. Circulation 97(3), 282–289 (1998)

    Article  Google Scholar 

  6. Goubergrits, L., et al.: The impact of MRI-based inflow for the hemodynamic evaluation of aortic coarctation. Ann. Biomed. Eng. 41, 2575–2587 (2013)

    Article  Google Scholar 

  7. Himburg, H.A., Dowd, S.E., Friedman, M.H.: Frequency-dependent response of the vascular endothelium to pulsatile shear stress. Am. J. Physiol.-Heart Circulatory Physiol. 293(1), H645–H653 (2007)

    Article  Google Scholar 

  8. Itu, L., et al.: A machine-learning approach for computation of fractional flow reserve from coronary computed tomography. J. Appl. Physiol. 121(1), 42–52 (2016)

    Article  Google Scholar 

  9. Kipf, T.N., Welling, M.: Semi-supervised classification with graph convolutional networks. arXiv preprint arXiv:1609.02907 (2016)

  10. Lee, M.C.H., Petersen, K., Pawlowski, N., Glocker, B., Schaap, M.: Template transformer networks for image segmentation (2019)

    Google Scholar 

  11. Li, G., et al.: Prediction of 3D cardiovascular hemodynamics before and after coronary artery bypass surgery via deep learning. Commun. Biol. 4(1), 99 (2021)

    Article  Google Scholar 

  12. Morice, M.C., et al.: A randomized comparison of a sirolimus-eluting stent with a standard stent for coronary revascularization. N. Engl. J. Med. 346(23), 1773–1780 (2002)

    Article  Google Scholar 

  13. Qi, C.R., Su, H., Mo, K., Guibas, L.J.: PointNet: deep learning on point sets for 3D classification and segmentation. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, pp. 652–660 (2017)

    Google Scholar 

  14. Sklet, V.: Exploring the capabilities of machine learning (ML) for 1D blood flow: application to coronary flow. Master’s thesis, NTNU (2018)

    Google Scholar 

  15. Thondapu, V., Bourantas, C.V., Foin, N., Jang, I.K., Serruys, P.W., Barlis, P.: Biomechanical stress in coronary atherosclerosis: emerging insights from computational modelling. Eur. Heart J. 38(2), 81–92 (2017)

    Google Scholar 

  16. Valen-Sendstad, K., et al.: Real-world variability in the prediction of intracranial aneurysm wall shear stress: the 2015 international aneurysm CFD challenge. Cardiovasc. Eng. Technol. 9, 544–564 (2018)

    Article  Google Scholar 

  17. Wang, N., Zhang, Y., Li, Z., Fu, Y., Liu, W., Jiang, Y.G.: Pixel2Mesh: generating 3D mesh models from single RGB images. In: Proceedings of the European Conference on Computer Vision (ECCV), pp. 52–67 (2018)

    Google Scholar 

  18. Windecker, S., et al.: 2014 ESC/EACTS guidelines on myocardial revascularization. Kardiologia Polska (Polish Heart J.) 72(12), 1253–1379 (2014)

    Article  Google Scholar 

  19. Xu, L., Liang, F., Gu, L., Liu, H.: Flow instability detected in ruptured versus unruptured cerebral aneurysms at the internal carotid artery. J. Biomech. 72, 187–199 (2018)

    Article  Google Scholar 

  20. Xu, L., Liang, F., Zhao, B., Wan, J., Liu, H.: Influence of aging-induced flow waveform variation on hemodynamics in aneurysms present at the internal carotid artery: a computational model-based study. Comput. Biol. Med. 101, 51–60 (2018)

    Article  Google Scholar 

  21. Yang, X., Xu, L., Yu, S., Xia, Q., Li, H., Zhang, S.: Segmentation and vascular vectorization for coronary artery by geometry-based cascaded neural network. arXiv preprint arXiv:2305.04208 (2023)

  22. Zhang, X., et al.: Progressive deep segmentation of coronary artery via hierarchical topology learning. In: Wang, L., Dou, Q., Fletcher, P.T., Speidel, S., Li, S. (eds.) Medical Image Computing and Computer Assisted Intervention-MICCAI 2022: 25th International Conference, Singapore, 18–22 September 2022, Proceedings, Part V, pp. 391–400. Springer, Cham (2022). https://doi.org/10.1007/978-3-031-16443-9_38

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Lijian Xu .

Editor information

Editors and Affiliations

1 Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary material 1 (mp4 24119 KB)

Rights and permissions

Reprints and permissions

Copyright information

© 2024 The Author(s), under exclusive license to Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Ni, Z. et al. (2024). Voxel2Hemodynamics: An End-to-End Deep Learning Method for Predicting Coronary Artery Hemodynamics. In: Camara, O., et al. Statistical Atlases and Computational Models of the Heart. Regular and CMRxRecon Challenge Papers. STACOM 2023. Lecture Notes in Computer Science, vol 14507. Springer, Cham. https://doi.org/10.1007/978-3-031-52448-6_2

Download citation

  • DOI: https://doi.org/10.1007/978-3-031-52448-6_2

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-031-52447-9

  • Online ISBN: 978-3-031-52448-6

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics