Abstract
High-speed atomic force microscopy (HS-AFM) is a unique tool that enables imaging of protein molecules during their functional activity at sub-100 ms temporal and submolecular spatial resolution. HS-AFM is suited for the study of highly dynamic proteins, including myosin motors. HS-AFM images of myosin V walking on actin filaments provide irrefutable evidence for the swinging lever arm motion propelling the molecule forward. Moreover, molecular behaviors that have not been noticed before are also displayed on the AFM movies. This chapter describes the principle, underlying techniques and performance of HS-AFM, filmed images of myosin V, and mechanistic insights into myosin motility provided from the filmed images.
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References
Ali MY, Uemura S, Adachi K, Itoh H, Kinosita K Jr, Ishiwata S (2002) Myosin V is a left-handed spiral motor on the right-handed actin helix. Nat Struct Biol 9:464–467. https://doi.org/10.1038/nsb803
Ando T (2012) High-speed atomic force microscopy coming of age. Nanotechnology 23:062001. https://doi.org/10.1088/0957-4484/23/6/062001
Ando T (2019) High-speed atomic force microscopy. Curr Opin Chem Biol 51:105–112
Ando T, Kodera N, Takai E, Maruyama D, Saito K, Toda A (2001) A high-speed atomic force microscope for studying biological macromolecules. Proc Natl Acad Sci U S A 98:12468–12472. https://doi.org/10.1073/pnas.211400898
Ando T, Kodera N, Uchihashi T, Miyagi A, Nakakita R, Yamashita H, Matada K (2005) High-speed atomic force microscopy for capturing dynamic behavior of protein molecules at work. e-J Surf Sci Nanotechnol 3:384–392. https://doi.org/10.1380/ejssnt.2005.384
Ando T, Uchihashi T, Fukuma T (2008) High-speed atomic force microscopy for nano-visualization of dynamic biomolecular processes. Prog Surf Sci 83:337–437. https://doi.org/10.1016/j.progsurf.2008.09.001
Ando T, Uchihashi T, Kodera N (2013) High-speed AFM and applications to biomolecular systems. Annu Rev Biophys 42:393–414. https://doi.org/10.1146/annurev-biophys-083012-130324
Ando T, Uchihashi T, Scheuring S (2014) Filming biomolecular processes by high-speed atomic force microscopy. Chem Rev 114:3120–3188. https://doi.org/10.1021/cr4003837
Andrecka J, Ortega Arroyo J, Takagi Y, de Wit G, Fineberg A, MacKinnon L, Young G, Sellers JR, Kukura P (2015) Structural dynamics of myosin 5 during processive motion revealed by interferometric scattering microscopy. eLife 4:e05413. https://doi.org/10.7554/eLife.05413
Baker JE, Krementsova EB, Kennedy GG, Armstrong A, Trybus KM, Warshaw DM (2004) Myosin V processivity: multiple kinetic pathways for head-to-head coordination. Proc Natl Acad Sci U S A 101:5542–5546. https://doi.org/10.1073/pnas.0307247101
Baumann F, Bauer MS, Rees M, Alexandrovich A, Gautel M, Pippig DA, Gaub HE (2017) Increasing evidence of mechanical force as a functional regulator in smooth muscle myosin light chain kinase. eLife 6:e26473. https://doi.org/10.7554/eLife.26473
Beausang JF, Shroder DY, Nelson PC, Goldman YE (2013) Tilting and wobble of myosin V by high-speed single-molecule polarized fluorescence microscopy. Biophys J 104:1263–1273. https://doi.org/10.1016/j.bpj.2013.01.057
Billington N, Revill DJ, Burgess SA, Chantler PD, Knight PJ (2014) Flexibility within the heads of muscle myosin-2 molecules. J Mol Biol 426:894–907. https://doi.org/10.1016/j.jmb.2013.11.028
Binnig G, Quate CF, Gerber C (1986) Atomic force microscope. Phys Rev Lett 56:930–933. https://doi.org/10.1103/PhysRevLett.56.930
Burgess S, Walker M, Wang F, Sellers JR, White HD, Knight PJ, Trinick J (2002) The prepower stroke conformation of myosin V. J Cell Biol 159:983–991. https://doi.org/10.1083/jcb.200208172
Cappello G, Pierobon P, Symonds C, Busoni L, Gebhardt JC, Rief M, Prost J (2007) Myosin V stepping mechanism. Proc Natl Acad Sci U S A 104:15328–15333. https://doi.org/10.1073/pnas.0706653104
Clemen AE, Vilfan M, Jaud J, Zhang J, Barmann M, Rief M (2005) Force-dependent stepping kinetics of myosin-V. Biophys J 88:4402–4410. https://doi.org/10.1529/biophysj.104.053504
Coureux PD, Wells AL, Menetrey J, Yengo CM, Morris CA, Sweeney HL, Houdusse A (2003) A structural state of the myosin V motor without bound nucleotide. Nature 425:419–423. https://doi.org/10.1038/nature01927
Coureux PD, Sweeney HL, Houdusse A (2004) Three myosin V structures delineate essential features of chemo-mechanical transduction. EMBO J 23:4527–4537. https://doi.org/10.1038/sj.emboj.7600458
De La Cruz EM, Wells AL, Rosenfeld SS, Ostap EM, Sweeney HL (1999) The kinetic mechanism of myosin V. Proc Natl Acad Sci U S A 96:13726–13731. https://doi.org/10.1073/pnas.96.24.13726
Decker B, Kellermayer MS (2008) Periodically arranged interactions within the myosin filament backbone revealed by mechanical unzipping. J Mol Biol 377:307–310. https://doi.org/10.1016/j.jmb.2008.01.023
Dominguez R, Freyzon Y, Trybus KM, Cohen C (1998) Crystal structure of a vertebrate smooth muscle myosin motor domain and its complex with the essential light chain: visualization of the pre-power stroke state. Cell 94:559–571. https://doi.org/10.1016/s0092-8674(00)81598-6
Dufrêne YF, Ando T, Garcia R, Alsteens D, Martinez-Martin D, Engel A, Gerber C, Muller DJ (2017) Imaging modes of atomic force microscopy for application in molecular and cell biology. Nat Nanotechnol 12:295–307. https://doi.org/10.1038/nnano.2017.45
Dunn AR, Spudich JA (2007) Dynamics of the unbound head during myosin V processive translocation. Nat Struct Mol Biol 14:246–248. https://doi.org/10.1038/nsmb1206
Fisher AJ, Smith CA, Thoden JB, Smith R, Sutoh K, Holden HM, Rayment I (1995) X-ray structures of the myosin motor domain of Dictyostelium discoideum complexed with MgADP.BeFx and MgADP.AlF4. Biochemistry 34:8960–8972
Forgacs E, Cartwright S, Sakamoto T, Sellers JR, Corrie JE, Webb MR, White HD (2008) Kinetics of ADP dissociation from the trail and lead heads of actomyosin V following the power stroke. J Biol Chem 283:766–773. https://doi.org/10.1074/jbc.M704313200
Forkey JN, Quinlan ME, Shaw MA, Corrie JE, Goldman YE (2003) Three-dimensional structural dynamics of myosin V by single-molecule fluorescence polarization. Nature 422:399–404. https://doi.org/10.1038/nature01529
Gautel M (2011) Cytoskeletal protein kinases: titin and its relations in mechanosensing. Pflugers Arch 462:119–134. https://doi.org/10.1007/s00424-011-0946-1
Geeves MA (1989) Dynamic interaction between actin and myosin subfragment 1 in the presence of ADP. Biochemistry 28:5864–5871. https://doi.org/10.1021/bi00440a024
Geeves MA, Holmes KC (1999) Structural mechanism of muscle contraction. Annu Rev Biochem 68:687–728. https://doi.org/10.1146/annurev.biochem.68.1.687
Hallett P, Offer G, Miles MJ (1995) Atomic force microscopy of the myosin molecule. Biophys J 68:1604–1606. https://doi.org/10.1016/S0006-3495(95)80333-4
Hannemann DE, Cao W, Olivares AO, Robblee JP, De La Cruz EM (2005) Magnesium, ADP, and actin binding linkage of myosin V: evidence for multiple myosin V-ADP and actomyosin V-ADP states. Biochemistry 44:8826–8840. https://doi.org/10.1021/bi0473509
Hansma PK, Drake B, Marti O, Gould SA, Prater CB (1989) The scanning ion-conductance microscope. Science 243:641–643. https://doi.org/10.1126/science.2464851
Hellerschmied D, Clausen T (2014) Myosin chaperones. Curr Opin Struct Biol 25:9–15. https://doi.org/10.1016/j.sbi.2013.11.002
Higashi-Fujime S (1980) Active movement in vitro of bundle of microfilaments isolated from Nitella cell. J Cell Biol 87:569–578. https://doi.org/10.1083/jcb.87.3.569
Houdusse A, Szent-Gyorgyi AG, Cohen C (2000) Three conformational states of scallop myosin S1. Proc Natl Acad Sci U S A 97:11238–11243. https://doi.org/10.1073/pnas.200376897
Huang B, Bates M, Zhuang X (2009) Super-resolution fluorescence microscopy. Annu Rev Biochem 78:993–1016. https://doi.org/10.1146/annurev.biochem.77.061906.092014
Huxley HE (1969) The mechanism of muscular contraction. Science 164:1356–1365. https://doi.org/10.1126/science.164.3886.1356
Ida H, Takahashi Y, Kumatani A, Shiku H, Matsue T (2017) High speed scanning ion conductance microscopy for quantitative analysis of nanoscale dynamics of microvilli. Anal Chem 89:6015–6020. https://doi.org/10.1021/acs.analchem.7b00584
Ikezaki K, Komori T, Arai Y, Yanagida T (2015) Lever arm extension of myosin VI is unnecessary for the adjacent binding state. Biophysics 11:47–53. https://doi.org/10.2142/biophysics.11.47
Ip K, Sobieszek A, Solomon D, Jiao Y, Pare PD, Seow CY (2007) Physical integrity of smooth muscle myosin filaments is enhanced by phosphorylation of the regulatory myosin light chain. Cell Physiol Biochem 20:649–658. https://doi.org/10.1159/000107548
Iwasaki T, Washio M, Yamamoto K (2005) Atomic force microscopy of thermally treated myosin filaments. J Agric Food Chem 53:4589–4592. https://doi.org/10.1021/jf0500381
Jacobs DJ, Trivedi D, David C, Yengo CM (2011) Kinetics and thermodynamics of the rate-limiting conformational change in the actomyosin V mechanochemical cycle. J Mol Biol 407:716–730. https://doi.org/10.1016/j.jmb.2011.02.001
Kaiser CM, Bujalowski PJ, Ma L, Anderson J, Epstein HF, Oberhauser AF (2012) Tracking UNC-45 chaperone-myosin interaction with a titin mechanical reporter. Biophys J 102:2212–2219. https://doi.org/10.1016/j.bpj.2012.03.013
Karsai A, Kellermayer MS, Harris SP (2011) Mechanical unfolding of cardiac myosin binding protein-C by atomic force microscopy. Biophys J 101:1968–1977. https://doi.org/10.1016/j.bpj.2011.08.030
Kellermayer M, Sziklai D, Papp Z, Decker B, Lakatos E, Martonfalvi Z (2018) Topology of interaction between titin and myosin thick filaments. J Struct Biol 203:46–53. https://doi.org/10.1016/j.jsb.2018.05.001
Kiss B, Rohlich P, Kellermayer MS (2011) Structure and elasticity of desmin protofibrils explored with scanning force microscopy. J Mol Recognit 24:1095–1104. https://doi.org/10.1002/jmr.1158
Kodera N, Ando T (2014) The path to visualization of walking myosin V by high-speed atomic force microscopy. Biophys Rev 6:237–260. https://doi.org/10.1007/s12551-014-0141-7
Kodera N, Yamashita H, Ando T (2005) Active damping of the scanner for high-speed atomic force microscopy. Rev Sci Instrum 76:053708. https://doi.org/10.1063/1.1903123
Kodera N, Sakashita M, Ando T (2006) Dynamic proportional-integral-differential controller for high-speed atomic force microscopy. Rev Sci Instrum 77. https://doi.org/10.1063/1.2336113
Kodera N, Yamamoto D, Ishikawa R, Ando T (2010) Video imaging of walking myosin V by high-speed atomic force microscopy. Nature 468:72–76. https://doi.org/10.1038/nature09450
Koide H, Kinoshita T, Tanaka Y, Tanaka S, Nagura N, Meyer zu Horste G, Miyagi A, Ando T (2006) Identification of the single specific IQ motif of myosin V from which calmodulin dissociates in the presence of Ca2+. Biochemistry 45:11598–11604. https://doi.org/10.1021/bi0613877
Liu J, Taylor DW, Krementsova EB, Trybus KM, Taylor KA (2006) Three-dimensional structure of the myosin V inhibited state by cryoelectron tomography. Nature 442:208–211. https://doi.org/10.1038/nature04719
Martin SR, Bayley PM (2004) Calmodulin bridging of IQ motifs in myosin-V. FEBS Lett 567:166–170. https://doi.org/10.1016/j.febslet.2004.04.053
Maschi D, Gramlich MW, Klyachko VA (2018) Myosin V functions as a vesicle tether at the plasma membrane to control neurotransmitter release in central synapses. eLife 7:e39440. https://doi.org/10.7554/eLife.39440
Mehta AD, Rock RS, Rief M, Spudich JA, Mooseker MS, Cheney RE (1999) Myosin-V is a processive actin-based motor. Nature 400:590–593. https://doi.org/10.1038/23072
Nakajima H, Kunioka Y, Nakano K, Shimizu K, Seto M, Ando T (1997) Scanning force microscopy of the interaction events between a single molecule of heavy meromyosin and actin. Biochem Biophys Res Commun 234:178–182. https://doi.org/10.1006/bbrc.1997.6612
Nishikawa S, Arimoto I, Ikezaki K, Sugawa M, Ueno H, Komori T, Iwane AH, Yanagida T (2010) Switch between large hand-over-hand and small inchworm-like steps in myosin VI. Cell 142:879–888. https://doi.org/10.1016/j.cell.2010.08.033
Oberhauser AF, Hansma PK, Carrion-Vazquez M, Fernandez JM (2001) Stepwise unfolding of titin under force-clamp atomic force microscopy. Proc Natl Acad Sci U S A 98:468–472. https://doi.org/10.1073/pnas.021321798
Oguchi Y, Mikhailenko SV, Ohki T, Olivares AO, De La Cruz EM, Ishiwata S (2008) Load-dependent ADP binding to myosins V and VI: implications for subunit coordination and function. Proc Natl Acad Sci U S A 105:7714–7719. https://doi.org/10.1073/pnas.0800564105
Okada T, Tanaka H, Iwane AH, Kitamura K, Ikebe M, Yanagida T (2007) The diffusive search mechanism of processive myosin class-V motor involves directional steps along actin subunits. Biochem Biophys Res Commun 354:379–384. https://doi.org/10.1016/j.bbrc.2006.12.200
Oke OA, Burgess SA, Forgacs E, Knight PJ, Sakamoto T, Sellers JR, White H, Trinick J (2010) Influence of lever structure on myosin 5a walking. Proc Natl Acad Sci U S A 107:2509–2514. https://doi.org/10.1073/pnas.0906907107
Olivares AO, Chang W, Mooseker MS, Hackney DD, De La Cruz EM (2006) The tail domain of myosin Va modulates actin binding to one head. J Biol Chem 281:31326–31336. https://doi.org/10.1074/jbc.M603898200
Purcell TJ, Morris C, Spudich JA, Sweeney HL (2002) Role of the lever arm in the processive stepping of myosin V. Proc Natl Acad Sci U S A 99:14159–14164. https://doi.org/10.1073/pnas.182539599
Purcell TJ, Sweeney HL, Spudich JA (2005) A force-dependent state controls the coordination of processive myosin V. Proc Natl Acad Sci U S A 102:13873–13878. https://doi.org/10.1073/pnas.0506441102
Ricca BL, Rock RS (2010) The stepping pattern of myosin X is adapted for processive motility on bundled actin. Biophys J 99:1818–1826. https://doi.org/10.1016/j.bpj.2010.06.066
Rico F, Gonzalez L, Casuso I, Puig-Vidal M, Scheuring S (2013) High-speed force spectroscopy unfolds titin at the velocity of molecular dynamics simulations. Science 342:741–743. https://doi.org/10.1126/science.1239764
Rief M, Gautel M, Oesterhelt F, Fernandez JM, Gaub HE (1997) Reversible unfolding of individual titin immunoglobulin domains by AFM. Science 276:1109–1112. https://doi.org/10.1126/science.276.5315.1109
Rief M, Rock RS, Mehta AD, Mooseker MS, Cheney RE, Spudich JA (2000) Myosin-V stepping kinetics: a molecular model for processivity. Proc Natl Acad Sci U S A 97:9482–9486. https://doi.org/10.1073/pnas.97.17.9482
Rigotti DJ, Kokona B, Horne T, Acton EK, Lederman CD, Johnson KA, Manning RS, Kane SA, Smith WF, Fairman R (2005) Quantitative atomic force microscopy image analysis of unusual filaments formed by the Acanthamoeba castellanii myosin II rod domain. Anal Biochem 346:189–200. https://doi.org/10.1016/j.ab.2005.08.026
Robblee JP, Cao W, Henn A, Hannemann DE, De La Cruz EM (2005) Thermodynamics of nucleotide binding to actomyosin V and VI: a positive heat capacity change accompanies strong ADP binding. Biochemistry 44:10238–10249. https://doi.org/10.1021/bi050232g
Root DD, Yadavalli VK, Forbes JG, Wang K (2006) Coiled-coil nanomechanics and uncoiling and unfolding of the superhelix and alpha-helices of myosin. Biophys J 90:2852–2866. https://doi.org/10.1529/biophysj.105.071597
Rosenfeld SS, Sweeney HL (2004) A model of myosin V processivity. J Biol Chem 279:40100–40111. https://doi.org/10.1074/jbc.M402583200
Sakamoto T, Amitani I, Yokota E, Ando T (2000) Direct observation of processive movement by individual myosin V molecules. Biochem Biophys Res Commun 272:586–590. https://doi.org/10.1006/bbrc.2000.2819
Sakamoto T, Wang F, Schmitz S, Xu Y, Xu Q, Molloy JE, Veigel C, Sellers JR (2003) Neck length and processivity of myosin V. J Biol Chem 278:29201–29207. https://doi.org/10.1074/jbc.M303662200
Sakamoto T, Yildez A, Selvin PR, Sellers JR (2005) Step-size is determined by neck length in myosin V. Biochemistry 44:16203–16210. https://doi.org/10.1021/bi0512086
Sakamoto T, Webb MR, Forgacs E, White HD, Sellers JR (2008) Direct observation of the mechanochemical coupling in myosin Va during processive movement. Nature 455:128–132. https://doi.org/10.1038/nature07188
Schwaiger I, Sattler C, Hostetter DR, Rief M (2002) The myosin coiled-coil is a truly elastic protein structure. Nat Mater 1:232–235. https://doi.org/10.1038/nmat776
Sellers JR, Veigel C (2010) Direct observation of the myosin-Va power stroke and its reversal. Nat Struct Mol Biol 17:590–595. https://doi.org/10.1038/nsmb.1820
Sheetz MP, Spudich JA (1983) Movement of myosin-coated fluorescent beads on actin cables in vitro. Nature 303:31–35. https://doi.org/10.1038/303031a0
Sheng S, Gao Y, Khromov AS, Somlyo AV, Somlyo AP, Shao Z (2003) Cryo-atomic force microscopy of unphosphorylated and thiophosphorylated single smooth muscle myosin molecules. J Biol Chem 278:39892–39896. https://doi.org/10.1074/jbc.M306094200
Shibata M, Uchihashi T, Ando T, Yasuda R (2015) Long-tip high-speed atomic force microscopy for nanometer-scale imaging in live cells. Sci Rep 5:8724. https://doi.org/10.1038/srep08724
Shiroguchi K, Kinosita K Jr (2007) Myosin V walks by lever action and Brownian motion. Science 316:1208–1212. https://doi.org/10.1126/science.1140468
Simeonov S, Schaffer TE (2019) High-speed scanning ion conductance microscopy for sub-second topography imaging of live cells. Nanoscale 11:8579–8587. https://doi.org/10.1039/c8nr10162k
Smith CA, Rayment I (1996) X-ray structure of the magnesium(II).ADP.vanadate complex of the Dictyostelium discoideum myosin motor domain to 1.9 A resolution. Biochemistry 35:5404–5417. https://doi.org/10.1021/bi952633+
Snyder GE, Sakamoto T, Hammer JA 3rd, Sellers JR, Selvin PR (2004) Nanometer localization of single green fluorescent proteins: evidence that myosin V walks hand-over-hand via telemark configuration. Biophys J 87:1776–1783. https://doi.org/10.1529/biophysj.103.036897
Sun Y, Schroeder HW 3rd, Beausang JF, Homma K, Ikebe M, Goldman YE (2007) Myosin VI walks "wiggly" on actin with large and variable tilting. Mol Cell 28:954–964. https://doi.org/10.1016/j.molcel.2007.10.029
Sun Y, Sato O, Ruhnow F, Arsenault ME, Ikebe M, Goldman YE (2010) Single-molecule stepping and structural dynamics of myosin X. Nat Struct Mol Biol 17:485–491. https://doi.org/10.1038/nsmb.1785
Syed S, Snyder GE, Franzini-Armstrong C, Selvin PR, Goldman YE (2006) Adaptability of myosin V studied by simultaneous detection of position and orientation. EMBO J 25:1795–1803. https://doi.org/10.1038/sj.emboj.7601060
Taniguchi M, Matsumoto O, Suzuki S, Nishino Y, Okuda A, Taga T, Yamane T (2003) MgATP-induced conformational changes in a single myosin molecule observed by atomic force microscopy: periodicity of substructures in myosin rods. Scanning 25:223–229. https://doi.org/10.1002/sca.4950250502
Thirumurugan K, Sakamoto T, Hammer JA 3rd, Sellers JR, Knight PJ (2006) The cargo-binding domain regulates structure and activity of myosin 5. Nature 442:212–215. https://doi.org/10.1038/nature04865
Tilelli CQ, Martins AR, Larson RE, Garcia-Cairasco N (2003) Immunohistochemical localization of myosin Va in the adult rat brain. Neuroscience 121:573–586. https://doi.org/10.1016/S0306-4522(03)00546-3
Toprak E, Enderlein J, Syed S, McKinney SA, Petschek RG, Ha T, Goldman YE, Selvin PR (2006) Defocused orientation and position imaging (DOPI) of myosin V. Proc Natl Acad Sci U S A 103:6495–6499. https://doi.org/10.1073/pnas.0507134103
Trybus KM, Krementsova E, Freyzon Y (1999) Kinetic characterization of a monomeric unconventional myosin V construct. J Biol Chem 274:27448–27456. https://doi.org/10.1074/jbc.274.39.27448
Uchihashi T, Kodera N, Ando T (2012) Guide to video recording of structure dynamics and dynamic processes of proteins by high-speed atomic force microscopy. Nat Protoc 7:1193–1206. https://doi.org/10.1038/nprot.2012.047
Uemura S, Higuchi H, Olivares AO, De La Cruz EM, Ishiwata S (2004) Mechanochemical coupling of two substeps in a single myosin V motor. Nat Struct Mol Biol 11:877–883. https://doi.org/10.1038/nsmb806
Veigel C, Wang F, Bartoo ML, Sellers JR, Molloy JE (2002) The gated gait of the processive molecular motor, myosin V. Nat Cell Biol 4:59–65. https://doi.org/10.1038/ncb732
Veigel C, Schmitz S, Wang F, Sellers JR (2005) Load-dependent kinetics of myosin-V can explain its high processivity. Nat Cell Biol 7:861–869. https://doi.org/10.1038/ncb1287
Volkmann N, Liu H, Hazelwood L, Krementsova EB, Lowey S, Trybus KM, Hanein D (2005) The structural basis of myosin V processive movement as revealed by electron cryomicroscopy. Mol Cell 19:595–605. https://doi.org/10.1016/j.molcel.2005.07.015
von Castelmur E, Strumpfer J, Franke B, Bogomolovas J, Barbieri S, Qadota H, Konarev PV, Svergun DI, Labeit S, Benian GM, Schulten K, Mayans O (2012) Identification of an N-terminal inhibitory extension as the primary mechanosensory regulator of twitchin kinase. Proc Natl Acad Sci U S A 109:13608–13613. https://doi.org/10.1073/pnas.1200697109
Walker ML, Burgess SA, Sellers JR, Wang F, Hammer JA 3rd, Trinick J, Knight PJ (2000) Two-headed binding of a processive myosin to F-actin. Nature 405:804–807. https://doi.org/10.1038/35015592
Wang F, Chen L, Arcucci O, Harvey EV, Bowers B, Xu Y, Hammer JA 3rd, Sellers JR (2000) Effect of ADP and ionic strength on the kinetic and motile properties of recombinant mouse myosin V. J Biol Chem 275:4329–4335. https://doi.org/10.1074/jbc.275.6.4329
Warshaw DM, Kennedy GG, Work SS, Krementsova EB, Beck S, Trybus KM (2005) Differential labeling of myosin V heads with quantum dots allows direct visualization of hand-over-hand processivity. Biophys J 88:L30–L32. https://doi.org/10.1529/biophysj.105.061903
Watanabe S, Ando T (2017) High-speed XYZ-nanopositioner for scanning ion conductance microscopy. Appl Phys Lett 111:113106. https://doi.org/10.1063/1.4993296
Watanabe M, Nomura K, Ohyama A, Ishikawa R, Komiya Y, Hosaka K, Yamauchi E, Taniguchi H, Sasakawa N, Kumakura K, Ushiki T, Sato O, Ikebe M, Igarashi M (2005) Myosin-Va regulates exocytosis through the submicromolar Ca2+−dependent binding of syntaxin-1A. Mol Biol Cell 16:4519–4530. https://doi.org/10.1091/mbc.e05-03-0252
Watanabe H, Uchihashi T, Kobashi T, Shibata M, Nishiyama J, Yasuda R, Ando T (2013) Wide-area scanner for high-speed atomic force microscopy. Rev Sci Instrum 84:053702. https://doi.org/10.1063/1.4803449
Watanabe S, Kitazawa S, Sun L, Kodera N, Ando T (2019) Development of high-speed ion conductance microscopy. Rev Sci Instrum 90(12):123704
Yamamoto D, Nagura N, Omote S, Taniguchi M, Ando T (2009) Streptavidin 2D crystal substrates for visualizing biomolecular processes by atomic force microscopy. Biophys J 97:2358–2367. https://doi.org/10.1016/j.bpj.2009.07.046
Yamamoto D, Uchihashi T, Kodera N, Yamashita H, Nishikori S, Ogura T, Shibata M, Ando T (2010) High-speed atomic force microscopy techniques for observing dynamic biomolecular processes. Methods Enzymol 475:541–564. https://doi.org/10.1016/S0076-6879(10)75020-5
Yamashita H, Taoka A, Uchihashi T, Asano T, Ando T, Fukumori Y (2012) Single-molecule imaging on living bacterial cell surface by high-speed AFM. J Mol Biol 422:300–309. https://doi.org/10.1016/j.jmb.2012.05.018
Yildiz A, Forkey JN, McKinney SA, Ha T, Goldman YE, Selvin PR (2003) Myosin V walks hand-over-hand: single fluorophore imaging with 1.5-nm localization. Science 300:2061–2065. https://doi.org/10.1126/science.1084398
Yildiz A, Park H, Safer D, Yang Z, Chen LQ, Selvin PR, Sweeney HL (2004) Myosin VI steps via a hand-over-hand mechanism with its lever arm undergoing fluctuations when attached to actin. J Biol Chem 279:37223–37226. https://doi.org/10.1074/jbc.C400252200
Zhang Y, Shao Z, Somlyo AP, Somlyo AV (1997) Cryo-atomic force microscopy of smooth muscle myosin. Biophys J 72:1308–1318. https://doi.org/10.1016/S0006-3495(97)78777-0
Zhong Q, Inniss D, Kjoller K, Elings VB (1993) Fractured polymer silica fiber surface studied by tapping mode atomic-force microscopy. Surf Sci 290:L688–L692. https://doi.org/10.1016/0039-6028(93)90582-5
Acknowledgements
We thank Takayuki Uchihashi, Daisuke Yamamoto, Ryoki Ishikawa, Takeshi Sakamoto, Tatsuya Kinoshita and Hiroshi Koide for useful discussions and technical assistances. This work was supported by JSPS KAKENHI (JP22870011 and 24770149 to N.K; JP24227005, JP26119003 and 17H06121 to T.A.) and JST grant (JPMJPR13L4 and JPMJCR1762 to N.K.; JPMJCR13M1 to T.A.).
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Kodera, N., Ando, T. (2020). High-Speed Atomic Force Microscopy to Study Myosin Motility. In: Coluccio, L. (eds) Myosins. Advances in Experimental Medicine and Biology, vol 1239. Springer, Cham. https://doi.org/10.1007/978-3-030-38062-5_7
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DOI: https://doi.org/10.1007/978-3-030-38062-5_7
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