Skip to main content

Smartphone-Supported Malaria Diagnosis Based on Deep Learning

  • Conference paper
  • First Online:
Book cover Machine Learning in Medical Imaging (MLMI 2019)

Abstract

Malaria remains a major burden on global health, causing about half a million deaths every year. The objective of this work is to develop a fast, automated, smartphone-supported malaria diagnostic system. Our proposed system is the first system using both image processing and deep learning methods on a smartphone to detect malaria parasites in thick blood smears. The underlying detection algorithm is based on an iterative method for parasite candidate screening and a convolutional neural network model (CNN) for feature extraction and classification. The system runs on Android phones and can process blood smear images taken by the smartphone camera when attached to the eyepiece of a microscope. We tested the system on 50 normal patients and 150 abnormal patients. The accuracies of the system on patch-level and patient-level are 97% and 78%, respectively. AUC values on patch-level and patient-level are, respectively, 98% and 85%. Our system could aid in malaria diagnosis in resource-limited regions, without depending on extensive diagnostic expertise or expensive diagnostic equipment.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. WHO: World malaria report 2018 (2018)

    Google Scholar 

  2. WHO: Guidelines for the treatment of malaria. 3rd edn. World Health Organization (2015)

    Google Scholar 

  3. Makhija, K.S., Maloney, S., Norton, R.: The utility of serial blood film testing for the diagnosis of malaria. Pathology 47(1), 68–70 (2015)

    Article  Google Scholar 

  4. WHO: Malaria micropscopy quality assurance manual. World Health Organization (2016)

    Google Scholar 

  5. Poostchi, M., Silamut, K., Maude, R.J., Jaeger, S., Thoma, G.: Image analysis and machine learning for detecting malaria. Transl. Res. 194, 36–55 (2018)

    Article  Google Scholar 

  6. Breslauer, D.N., Maamari, R.N., Switz, N.A., Lam, W.A., Fletcher, D.A.: Mobile phone based clinical microscopy for global health applications. PLoS ONE 4(7), 1–7 (2009)

    Article  Google Scholar 

  7. Tuijn, C.J., Li, J.: Data and image transfer using mobile phones to strengthen microscopy-based diagnostic services in low and middle income country laboratories. PLoS One 6(12), e28348 (2011)

    Article  Google Scholar 

  8. Skandarajah, A., Reber, C.D., Switz, N.A., Fletcher, D.A.: Quantitative imaging with a mobile phone microscope. PLoS One 9(5), e96906 (2014)

    Article  Google Scholar 

  9. Pirnstill, C.W., Coté, G.L.: Malaria diagnosis using a mobile phone polarized microscope. Sci. Rep. 5, 1–13 (2015)

    Article  Google Scholar 

  10. Coulibaly, J.T., et al.: Evaluation of malaria diagnoses using a handheld light microscope in a community-based setting in rural Côte d’Ivoire. Am. J. Trop. Med. Hyg. 95(4), 831–834 (2016)

    Article  Google Scholar 

  11. Kaewkamnerd, S., Uthaipibull, C., Intarapanich, A., Pannarut, M., Chaotheing, S., Tongsima, S.: An automatic device for detection and classification of malaria parasite species in thick blood film. BMC Bioinform. 13(Suppl 17), S18 (2012)

    Article  Google Scholar 

  12. Quinn, J.A., Nakasi, R., Mugagga, P.K.B., Byanyima, P., Lubega, W., Andama, A.: Deep convolutional neural networks for microscopy-based point of care diagnostics. In: International Conference on Machine Learning for Health Care, Los Angeles, CA, pp. 1–12 (2016)

    Google Scholar 

  13. Cesario, M., Lundon, M., Luz, S., Masoodian, M., Rogers, B.: Mobile support for diagnosis of communicable diseases in remote locations. In: 13th International Conference of the NZ Chapter of the ACM’s Special Interest Group on Human-Computer Interaction – CHINZ 2012, Dunedin, New Zealand, pp. 25–28 (2012)

    Google Scholar 

  14. Dallet, C., Kareem, S., Kale, I.: Real time blood image processing application for malaria diagnosis using mobile phones. In: IEEE International Symposium on Circuits and Systems, Melbourne VIC, Australia, pp. 2405–2408 (2014)

    Google Scholar 

  15. Rosado, L., Da Costa, J.M.C., Elias, D., Cardoso, J.S.: Automated detection of malaria parasites on thick blood smears via mobile devices. Procedia Comput. Sci. 90, 138–144 (2016)

    Article  Google Scholar 

  16. Rosado, L., Correia da Costa, J.M., Elias, D., Cardoso, J.S.: Mobile-based analysis of malaria-infected thin blood smears: automated species and life cycle stage determination. Sensors 17(10), 2167 (2017)

    Google Scholar 

  17. Eysenbach, G., Ofli, F., Chen, S., Kevin, G., Oliveira, A.D.: The malaria system microapp: a new, mobile device-based tool for malaria diagnosis. JMIR Res. Protoc. 6(4), e70 (2017)

    Article  Google Scholar 

  18. Otsu, N.: A threshold selection method from gray-level histograms. IEEE Trans. Syst. Man Cybern. 9(1), 62–66 (1979)

    Article  Google Scholar 

  19. Ren, S., He, K., Girshick, R., Sun, J.: Faster R-CNN: towards real-time object detection with region proposal networks. IEEE Trans. Pattern Anal. Mach. Intell. 39(6), 1137–1149 (2017)

    Article  Google Scholar 

  20. Redmon, J., Divvala, S., Girshick, R., Farhadi, A.: You only look once: unified, real-time object detection. https://arxiv.org/pdf/1506.02640.pdf. Accessed 01 Apr 2019

Download references

Acknowledgment

We would like to thank Dr. Md. A. Hossain for supporting our data acquisition at Chittagong Medical Hospital, Bangladesh. This research is supported by the Intramural Research Program of the National Institutes of Health, National Library of Medicine, and Lister Hill National Center for Biomedical Communications. Mahidol-Oxford Tropical Medicine Research Unit is funded by the Wellcome Trust of Great Britain. This research is also supported by the National Basic Research Program of China under No. 61671049 and the National Key R&D Plan of China under No. 2017YFB1400100.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Feng Yang .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2019 Springer Nature Switzerland AG

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Yang, F., Yu, H., Silamut, K., Maude, R.J., Jaeger, S., Antani, S. (2019). Smartphone-Supported Malaria Diagnosis Based on Deep Learning. In: Suk, HI., Liu, M., Yan, P., Lian, C. (eds) Machine Learning in Medical Imaging. MLMI 2019. Lecture Notes in Computer Science(), vol 11861. Springer, Cham. https://doi.org/10.1007/978-3-030-32692-0_9

Download citation

  • DOI: https://doi.org/10.1007/978-3-030-32692-0_9

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-32691-3

  • Online ISBN: 978-3-030-32692-0

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics