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Encoding CT Anatomy Knowledge for Unpaired Chest X-ray Image Decomposition

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Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 (MICCAI 2019)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 11769))

Abstract

Although chest X-ray (CXR) offers a 2D projection with overlapped anatomies, it is widely used for clinical diagnosis. There is clinical evidence supporting that decomposing an X-ray image into different components (e.g., bone, lung and soft tissue) improves diagnostic value. We hereby propose a decomposition generative adversarial network (DecGAN) to anatomically decompose a CXR image but with unpaired data. We leverage the anatomy knowledge embedded in CT, which features a 3D volume with clearly visible anatomies. Our key idea is to embed CT priori decomposition knowledge into the latent space of unpaired CXR autoencoder. Specifically, we train DecGAN with a decomposition loss, adversarial losses, cycle-consistency losses and a mask loss to guarantee that the decomposed results of the latent space preserve realistic body structures. Extensive experiments demonstrate that DecGAN provides superior unsupervised CXR bone suppression results and the feasibility of modulating CXR components by latent space disentanglement. Furthermore, we illustrate the diagnostic value of DecGAN and demonstrate that it outperforms the state-of-the-art approaches in terms of predicting 11 out of 14 common lung diseases.

This work was done when Z. Li, G. Shi and J. Wang were interns at MIRACLE.

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References

  1. Armato III, S.G., McLennan, G., et al.: The lung image database consortium (LIDC) and image database resource initiative (IDRI): a completed reference database of lung nodules on CT scans. Med. Phys. 38(2), 915–931 (2011)

    Article  Google Scholar 

  2. Hogeweg, L., Sanchez, C.I., van Ginneken, B.: Suppression of translucent elongated structures: applications in chest radiography. IEEE Trans. Med. Imaging 32(11), 2099–2113 (2013)

    Article  Google Scholar 

  3. Huang, G., Liu, Z., Van Der Maaten, L., Weinberger, K.Q.: Densely connected convolutional networks. In: IEEE CVPR, pp. 4700–4708 (2017)

    Google Scholar 

  4. Jaeger, S., Candemir, S., et al.: Two public chest X-ray datasets for computer-aided screening of pulmonary diseases. Quant. Imaging Med. Surg. 4(6), 475–477 (2014)

    Google Scholar 

  5. Laskey, M.A.: Dual-energy X-ray absorptiometry and body composition. Nutrition 12(1), 45–51 (1996)

    Article  Google Scholar 

  6. Ronneberger, O., Fischer, P., Brox, T.: U-net: convolutional networks for biomedical image segmentation. In: Navab, N., Hornegger, J., Wells, W.M., Frangi, A.F. (eds.) MICCAI 2015. LNCS, vol. 9351, pp. 234–241. Springer, Cham (2015). https://doi.org/10.1007/978-3-319-24574-4_28

    Chapter  Google Scholar 

  7. Wang, X., Peng, Y., et al.: ChestX-ray8: hospital-scale chest X-ray database and benchmarks on weakly-supervised classification and localization of common thorax diseases. In: IEEE CVPR, pp. 3462–3471 (2017)

    Google Scholar 

  8. Yang, W., et al.: Cascade of multi-scale convolutional neural networks for bone suppression of chest radiographs in gradient domain. Med. Image Anal. 35, 421–433 (2017)

    Article  Google Scholar 

  9. Zhang, Y., Miao, S., Mansi, T., Liao, R.: Task driven generative modeling for unsupervised domain adaptation: application to X-ray image segmentation. In: Frangi, A.F., Schnabel, J.A., Davatzikos, C., Alberola-López, C., Fichtinger, G. (eds.) MICCAI 2018. LNCS, vol. 11071, pp. 599–607. Springer, Cham (2018). https://doi.org/10.1007/978-3-030-00934-2_67

    Chapter  Google Scholar 

  10. Zhou, B., Lin, X., Eck, B., Hou, J., Wilson, D.: Generation of virtual dual energy images from standard single-shot radiographs using multi-scale and conditional adversarial network. In: Jawahar, C.V., Li, H., Mori, G., Schindler, K. (eds.) ACCV 2018. LNCS, vol. 11361, pp. 298–313. Springer, Cham (2019). https://doi.org/10.1007/978-3-030-20887-5_19

    Chapter  Google Scholar 

  11. Zhu, J.Y., Park, T., Isola, P., Efros, A.A.: Unpaired image-to-image translation using cycle-consistent adversarial networks. In: IEEE ICCV, pp. 2242–2251 (2017)

    Google Scholar 

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Acknowledgements

H. Han’s work is supported in part by the Natural Science Foundation of China (grants 61732004 and 61672496), External Cooperation Program of Chinese Academy of Sciences (CAS) (grant GJHZ1843), and Youth Innovation Promotion Association CAS (grant 2018135). We thank Cheng Ouyang for helpful comments.

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Correspondence to Hu Han or S. Kevin Zhou .

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Li, Z., Li, H., Han, H., Shi, G., Wang, J., Zhou, S.K. (2019). Encoding CT Anatomy Knowledge for Unpaired Chest X-ray Image Decomposition. In: Shen, D., et al. Medical Image Computing and Computer Assisted Intervention – MICCAI 2019. MICCAI 2019. Lecture Notes in Computer Science(), vol 11769. Springer, Cham. https://doi.org/10.1007/978-3-030-32226-7_31

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  • DOI: https://doi.org/10.1007/978-3-030-32226-7_31

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  • Publisher Name: Springer, Cham

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  • Online ISBN: 978-3-030-32226-7

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