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Molecular Evolution and Genetic Diversity of Oil Palm Based on Sequencing and Analysis with Molecular Markers

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The Oil Palm Genome

Part of the book series: Compendium of Plant Genomes ((CPG))

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Abstract

Molecular marker advancement and utilization to exploit and identify genetic diversity are the most key developments in molecular genetic studies. Molecular markers are the most common tool for exploring plant genetic diversity and area pre- requisite for gene mapping, segregation and genetic analysis, forensic assessment, phylogenetic analysis, and the achievement of many other biological goals. Despite the development of several molecular marker types that are regularly applied in plant breeding, majority of these markers are confined in their functions due to their limited accessibility and the cost of analyses carried out on a large scale. However, the advent of sequencing technologies, including next-generation sequencing (NGS) and genotyping by sequencing (GBS), has transformed plant breeding via SSR and SNP development. To date, different types of sequencing technologies have been generated and reviewed. This chapter provides insight into the spectrum of molecular marker-based detection methods and their role in determining the genetic diversity of oil palms based on sequencing.

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Acknowledgements

The authors wish to acknowledge Universiti Putra Malaysia (UPM) for support.

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Authors and Affiliations

  1. Laboratory of Plantation Science and Technology, Institute of Plantation Studies, Universiti Putra Malaysia, 43400, Serdang, Selangor, Malaysia

    Parisa Azizi & Mohamed Musa Hanafi

  2. Laboratory of Climate-Smart Food Crop Production, Institute of Tropical Agriculture and Food Security, Universiti Putra Malaysia, Serdang, Selangor, Malaysia

    Parisa Azizi, Mohamed Musa Hanafi, Mohd Rafii Yusop & Mahbod Sahebi

  3. Department of Land Management, Faculty of Agriculture, Universiti Putra Malaysia, 43400, Serdang, Selangor, Malaysia

    Mohamed Musa Hanafi

  4. Prime Minister’s Department, Malaysian Industry-Government Group for High Technology (MIGHT), MIGHT Partnership Hub, Jalan Impact, 63000, Cyberjaya, Selangor, Malaysia

    Mohamad Osman

  5. Advanced Biotechnology and Breeding Centre, Malaysian Palm Oil Board, No. 6, Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia

    Maizura Ithnin

  6. Centre of Research in Biotechnology for Agriculture (CEBAR), University of Malaya, 50603, Kuala Lumpur, Malaysia

    Sima Taheri

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  1. Parisa Azizi
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Correspondence to Mohamed Musa Hanafi .

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Editors and Affiliations

  1. Advanced Biotechnology and Breeding Centre, Malaysian Palm Oil Board (MPOB), Kajang, Malaysia

    Maizura Ithnin

  2. Malaysian Palm Oil Board (MPOB), Kajang, Malaysia

    Ahmad Kushairi

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Azizi, P. et al. (2020). Molecular Evolution and Genetic Diversity of Oil Palm Based on Sequencing and Analysis with Molecular Markers. In: Ithnin, M., Kushairi, A. (eds) The Oil Palm Genome. Compendium of Plant Genomes. Springer, Cham. https://doi.org/10.1007/978-3-030-22549-0_8

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