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Molecular Evolution and Genetic Diversity of Oil Palm Based on Sequencing and Analysis with Molecular Markers

  • Parisa Azizi
  • Mohamed Musa HanafiEmail author
  • Mohamad Osman
  • Mohd Rafii Yusop
  • Maizura Ithnin
  • Sima Taheri
  • Mahbod Sahebi
Chapter
  • 28 Downloads
Part of the Compendium of Plant Genomes book series (CPG)

Abstract

Molecular marker advancement and utilization to exploit and identify genetic diversity are the most key developments in molecular genetic studies. Molecular markers are the most common tool for exploring plant genetic diversity and area pre- requisite for gene mapping, segregation and genetic analysis, forensic assessment, phylogenetic analysis, and the achievement of many other biological goals. Despite the development of several molecular marker types that are regularly applied in plant breeding, majority of these markers are confined in their functions due to their limited accessibility and the cost of analyses carried out on a large scale. However, the advent of sequencing technologies, including next-generation sequencing (NGS) and genotyping by sequencing (GBS), has transformed plant breeding via SSR and SNP development. To date, different types of sequencing technologies have been generated and reviewed. This chapter provides insight into the spectrum of molecular marker-based detection methods and their role in determining the genetic diversity of oil palms based on sequencing.

Keywords

Molecular markers Oil palm genetic diversity Genotyping by sequencing Next-generation sequencing 

Notes

Acknowledgements

The authors wish to acknowledge Universiti Putra Malaysia (UPM) for support.

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Copyright information

© Springer Nature Switzerland AG 2020

Authors and Affiliations

  • Parisa Azizi
    • 1
    • 2
  • Mohamed Musa Hanafi
    • 1
    • 2
    • 3
    Email author
  • Mohamad Osman
    • 4
  • Mohd Rafii Yusop
    • 2
  • Maizura Ithnin
    • 5
  • Sima Taheri
    • 6
  • Mahbod Sahebi
    • 2
  1. 1.Laboratory of Plantation Science and TechnologyInstitute of Plantation Studies, Universiti Putra MalaysiaSerdangMalaysia
  2. 2.Laboratory of Climate-Smart Food Crop ProductionInstitute of Tropical Agriculture and Food Security, Universiti Putra MalaysiaSerdangMalaysia
  3. 3.Department of Land Management, Faculty of AgricultureUniversiti Putra MalaysiaSerdangMalaysia
  4. 4.Prime Minister’s DepartmentMalaysian Industry-Government Group for High Technology (MIGHT)CyberjayaMalaysia
  5. 5.Advanced Biotechnology and Breeding CentreMalaysian Palm Oil BoardKajangMalaysia
  6. 6.Centre of Research in Biotechnology for Agriculture (CEBAR), University of MalayaKuala LumpurMalaysia

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