Abstract
Left ventricle (LV) quantification is of great clinical importance for diagnosing and monitoring cardiac diseases. Full quantification of LV indices includes: (1) two areas of LV cavity and myocardium, (2) six regional wall thicknesses (RWT), (3) three LV dimensions, and (4) phase identification (diastole or systole). However, due to the large variability in the object shape and imaging quality, it is time-consuming and user-dependent to quantify LV parameters manually. In this work, we propose a cascading deep neural network, including an enhanced supervision U-net followed a recurrent neural network (RNN) type of phase-prediction net called P-net, abbreviated as ESU-P-net, for full LV quantification in a fully automated manner. The proposed ESU-P-net framework is dedicated to the full quantification of LV for all four types of indices.
Experiments on MR sequences of 145 subjects provided by MICCAI 2018 STACOM Challenge showed that the proposed network achieved highly accurate LV quantification, with an average mean absolute error (MAE) of 62 mm2, 1.14 mm, 0.96 mm for LV areas, RWT, dimensions, respectively, and an error rate of 8.0% for cardiac phase identification.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Karamitsos, T.D., Francis, J.M., Myerson, S., Selvanayagam, J.B., Neubauer, S.: The role of cardiovascular magnetic resonance imaging in heart failure. J. Am. Coll. Cardiol. 54(15), 1407–1424 (2009)
Tran, P.V.: A fully convolutional neural network for cardiac segmentation in short-axis MRI (2016). arXiv:1604.00494
Szegedy, C., Vanhoucke, V., Ioffe, S., Shlens J., Wojna, Z.: Rethinking the inception architecture for computer vision (2015). arXiv preprint arXiv:1512.00567
Dou, Q., et al.: 3D deeply supervised network for automated segmentation of volumetric medical images. Med. Image Anal. 41, 40–54 (2017)
Zhang, X., Lu, L., Lapata, M.: Tree recurrent neural networks with application to language modeling (2015). arXiv preprint arXiv:1511.00060
Ayed, I.B., Chen, H.-M., Punithakumar, K., Ross, I., Li, S.: Max-flow segmentation of the left ventricle by recovering subject-specific distributions via a bound of the Bhattacharyya measure. Med. Image Anal. 16(1), 87–100 (2012)
Xue, W., Islam, A., Bhaduri, M., Li, S.: Direct multitype cardiac indices estimation via joint representation and regression learning. IEEE Trans. Med. Imaging 36(10), 2057–2067 (2017)
Xue, W., Brahm, G., Pandey, S., Leung, S., Li, S.: Full left ventricle quantification via deep multitask relationships learning. Med. Image Anal. 43, 54–65 (2018)
Acknowledgement
This work was supported by National Key Research and Development Program of China (No. 2018YFC0116303).
Author information
Authors and Affiliations
Corresponding authors
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2019 Springer Nature Switzerland AG
About this paper
Cite this paper
Yan, W., Wang, Y., Chen, S., van der Geest, R.J., Tao, Q. (2019). ESU-P-Net: Cascading Network for Full Quantification of Left Ventricle from Cine MRI. In: Pop, M., et al. Statistical Atlases and Computational Models of the Heart. Atrial Segmentation and LV Quantification Challenges. STACOM 2018. Lecture Notes in Computer Science(), vol 11395. Springer, Cham. https://doi.org/10.1007/978-3-030-12029-0_45
Download citation
DOI: https://doi.org/10.1007/978-3-030-12029-0_45
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-030-12028-3
Online ISBN: 978-3-030-12029-0
eBook Packages: Computer ScienceComputer Science (R0)