Abstract
Pear breeding programs are mainly focused on resistance to biotic stress and fruit quality traits. In the last two decades, major efforts have been undertaken toward identification of major genes and quantitative trait loci (QTLs) linked to both biotic resistance and fruit quality traits, along with their associated molecular markers in order to enable marker-assisted selection and breeding. This chapter will cover most relevant results reported so far pertaining to markers and QTLs linked to resistance to pathogens and pests (such as fire blight, scab, brown and black spot, pear psylla, pear sludge, and blister mite), fruit quality (fruit size, firmness, skin overcolor, russeting, fruit sweetness, and fruit acidity), and other traits (such as tree habit, chilling requirement, and harvest time). Furthermore, summaries of findings of studies conducted before and after the beginning of the genomics era will be provided. In addition, all progenies and selected parental lines capable of conferring traits of interest to their progenies are described herein. The aim is to provide breeders with tools to identify pear ideotypes in which several traits can be combined into a single individual. Furthermore, knowledge of genes and their related functions should serve as the basis for pursuing new plant breeding technologies, such as cisgenesis or DNA editing. These unprecedented advances in genomics and breeding strategies promise to enable dramatic improvements in breeding efficiencies, even for pears, that will also reduce time and costs incurred in today’s traditional genetic improvement efforts.
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References
Abe K, Saito T, Terai O, Sato Y, Kotobuki K (2008) Genotypic difference for the susceptibility of Japanese, Chinese and European pears to Venturia nashicola, the cause of scab on Asian pears. Plant Breed 127:407–412. https://doi.org/10.1111/j.1439-0523.2007.01482.x
Bellini E, Nin S (2002) Breeding for new traits in pear. Acta Hortic 217–224. https://doi.org/10.17660/actahortic.2002.596.31
Bokszczanin K, Dondini L, Przybyla AA (2009) First report on the presence of fire blight resistance in linkage group 11 of Pyrus ussuriensis Maxim. J Appl Genet 50:99–103. https://doi.org/10.1007/bf03195660
Bokszczanin KL, Przybyla AA, Dondini L, Palucha A (2011) QTLs for fire blight (Erwinia amylovora) resistance in Pyrus ussuriensis. Acta Hortic 371–373. https://doi.org/10.17660/actahortic.2011.896.52
Bouvier L, Bourcy M, Boulay M, Tellier M, Guérif P, Denancé C, Durel CE, Lespinasse Y (2012) A new pear scab resistance gene Rvp1 from the European pear cultivar “Navara” maps in a genomic region syntenic to an apple scab resistance gene cluster on linkage group 2. Tree Genet Genomes 8:53–60. https://doi.org/10.1007/s11295-011-0419-x
Brewer L, Shaw P, Wallis R, Alspach P, Aldworth M, Orellana-torrejon C, Chagné D, Bus VGM, Brewer L (2018) Genetic mapping of pear sawfly (Caliroa cerasi) and pear blister mite (Eriophyes pyri) resistance in an interspecific pear family. Tree Genet Genomes 14:38. https://doi.org/10.1007/s11295-018-1254-0
Cappai F, De Franceschi P, Ciriani A, Collina M, Dondini L (2018) QTLs for susceptibility to Stemphylium vesicarium in pear. Mol Breed 38:24. https://doi.org/10.1007/s11032-018-0785-2
Chagné D, Crowhurst RN, Pindo M, Thrimawithana A, Deng C, Ireland H, Fiers M, Dzierzon H, Cestaro A, Fontana P, Bianco L, Lu A, Storey R, Knäbel M, Saeed M, Montanari S, Kim YK, Nicolini D, Larger S, Stefani E, Allan AC, Bowen J, Harvey I, Johnston J, Malnoy M, Troggio M, Perchepied L, Sawyer G, Wiedow C, Won K, Viola R, Hellens RP, Brewer L, Bus VGM, Schaffer RJ, Gardiner SE, Velasco R (2014) The draft genome sequence of European pear (Pyrus communis L. ’Bartlett’). PLoS ONE 9:e92644. https://doi.org/10.1371/journal.pone.0092644
Chevalier M, Bernard C, Tellier M, Lespinasse Y, Filmond R, Le Lezec M (2004) Variability in the reaction of several pear (Pyrus communis) cultivars to differentinocula of Venturia pirina. Acta Hortic 177–182. https://doi.org/10.17660/actahortic.2004.663.25
Cho KH, Shin S, Kim KT, Suh EJ, Hong SS, Lee HJ (2009) Development of AFLP and CAPS markers linked to the scab resistance gene, Rvn2, in an inter-specific hybrid pear (Pyrus spp.). J Hortic Sci Biotechnol 84:619–624. https://doi.org/10.1080/14620316.2009.11512576
Civolani S, Grandi G, Chicca M, Pasqualini E, Fano EA, Musacchi S (2013) Probing behaviour of Cacopsylla pyri on a resistant pear selection. J Appl Entomol 137:365–375. https://doi.org/10.1111/jen.12003
Costa F, Van De Weg WE, Stella S, Dondini L, Pratesi D, Musacchi S, Sansavini S (2008) Map position and functional allelic diversity of Md-Exp7, a new putative expansin gene associated with fruit softening in apple (Malus × domestica Borkh.) and pear (Pyrus communis). Tree Genet Genomes 4:575–586. https://doi.org/10.1007/s11295-008-0133-5
Dai M, Shi Z, Xu C (2015) Genome-wide analysis of sorbitol dehydrogenase (SDH) genes and their differential expression in two sand pear (Pyrus pyrifolia) fruits. Int J Mol Sci 16:13065–13083. https://doi.org/10.3390/ijms160613065
De Franceschi P, Pierantoni L, Dondini L, Grandi M, Sanzol J, Sansavini S (2011) Cloning and mapping multiple S-locus F-box genes in European pear (Pyrus communis L.). Tree Genet Genomes 7:231–240. https://doi.org/10.1007/s11295-010-0327-5
De Franceschi P, Dondini L, Sanzol J (2012) Molecular bases and evolutionary dynamics of self-incompatibility in the Pyrinae (Rosaceae). J Exp Bot 63:4015–4032. https://doi.org/10.1093/jxb/ers108
De Franceschi P, Stegmeir T, Cabrera A, van der Knaap E, Rosyara UR, Sebolt AM, Dondini L, Dirlewanger E, Quero-Garcia J, Campoy JA, Iezzoni AF (2013) Cell number regulator genes in Prunus provide candidate genes for the control of fruit size in sweet and sour cherry. Mol Breed 32:311–326. https://doi.org/10.1007/s11032-013-9872-6
Dondini L, Sansavini S (2012) European pear. In: Badenes ML, Byrne DH (eds) Fruit breeding. Springer Science + Business Media, Boston, MA, pp 369–413
Dondini L, Pierantoni L, Gaiotti F, Chiodini R, Tartarini S, Bazzi C, Sansavini S (2004) Identifying QTLs for fire-blight resistance via a European pear (Pyrus communis L.) genetic linkage map. Mol Breed 14:407–418. https://doi.org/10.1007/s11032-005-0505-6
Dondini L, Pierantoni L, Ancarani V, D’Angelo M, Cho KH, Shin IS, Musacchi S, Kang SJ, Sansavini S (2008) The inheritance of the red colour character in European pear (Pyrus communis) and its map position in the mutated cultivar “Max Red Bartlett”. Plant Breed 127:524–526. https://doi.org/10.1111/j.1439-0523.2008.01500.x
Dondini L, De Franceschi P, Ancarani V, Civolani S, Fano EA, Musacchi S (2015) Identification of a QTL for psylla resistance in pear via genome scanning approach. Sci Hortic 197:568–572. https://doi.org/10.1016/j.scienta.2015.10.018
Espley RV, Hellens RP, Putterill J, Stevenson DE, Kutty-Amma S, Allan AC (2007) Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10. Plant J 49:414–427. https://doi.org/10.1111/j.1365-313X.2006.02964.x
Feng S, Wang Y, Yang S, Xu Y, Chen X (2010) Anthocyanin biosynthesis in pears is regulated by a R2R3-MYB transcription factor PyMYB10. Planta 232:245–255. https://doi.org/10.1007/s00425-010-1170-5
Foster TM, Celton JM, Chagne D, Stuart Tustin D, Gardiner SE (2015) Two quantitative trait loci, Dw1 and Dw2, are primarily responsible for rootstock-induced dwarfing in apple. Hortic Res 2:15001. https://doi.org/10.1038/hortres.2015.1
Frary A, Nesbitt TC, Frary A, Grandillo S, Van Der Knaap E, Cong B, Liu J, Meller J, Elber R, Alpert KB, Tanksley SD (2000) fw2.2: a quantitative trait locus key to the evolution of tomato fruit size. Science 289:85–88. https://doi.org/10.1126/science.289.5476.85
Gabay G, Dahan Y, Izhaki Y, Isaacson T, Elkind Y, Ben-Ari G, Flaishman MA (2017) Identification of QTLs associated with spring vegetative budbreak time after dormancy release in pear (Pyrus communis L.). Plant Breed 136:749–758. https://doi.org/10.1111/pbr.12499
Gabay G, Dahan Y, Izhaki Y, Faigenboim A, Ben-ari G, Elkind Y, Flaishman MA (2018) High-resolution genetic linkage map of European pear (Pyrus communis) and QTL fine-mapping of vegetative budbreak time. BMC Plant Biol 18:1–13. https://doi.org/10.1186/s12870-018-1386-2
Hanada T, Nashima K, Kato M, Takashina T, Ikeda K, Sakamoto Y, Takahashi H, Nakazono M, Oikawa A, Shiratake K, Isuzugawa K (2015) Molecular cloning and expression analysis of the WEE1 and CCS52A genes in European pear (Pyrus communis L.) and their possible roles in a giant fruit mutant. J Hortic Sci Biotech 90:511–517. https://doi.org/10.1080/14620316.2015.11668707
Harris MK (1973) Host resistance to the pear psylla in a Pyrus communis × P. ussuriensis hybrid. Environ Entomol 2:883–887. https://doi.org/10.1093/ee/2.5.883
Iketani H, Abe K, Yamamoto T, Kotobuki K, Sato Y, Saito T, Terai O, Matsuta N, Hayashi T (2001) Mapping of disease-related genes in Japanese pear using a molecular linkage map with RAPD markers. Breed Sci 51:179–184. https://doi.org/10.1270/jsbbs.51.179
Isuzugawa K, Murayama H, Nishio T (2014) Characterization of a giant-fruit mutant exhibiting fruit-limited polyploidization in pear (Pyrus communis L.). Sci Hort 170:196–202. https://doi.org/10.1016/j.scienta.2014.03.009
Iwata H, Hayashi T, Terakami S, Takada N, Saito T, Yamamoto T (2013a) Genomic prediction of trait segregation in a progeny population: a case study of Japanese pear (Pyrus pyrifolia). BMC Genet 14:81. https://doi.org/10.1186/1471-2156-14-81
Iwata H, Hayashi T, Terakami S, Takada N, Sawamura Y, Yamamoto T (2013b) Potential assessment of genome-wide association study and genomic selection in Japanese pear Pyrus pyrifolia. Breed Sci 63:125–140. https://doi.org/10.1270/jsbbs.63.125
Knäbel M, Friend AP, Palmer JW, Diack R, Wiedow C, Alspach P, Deng C, Gardiner SE, Tustin DS, Schaffer R, Foster T, Chagné D (2015) Genetic control of pear rootstock-induced dwarfing and precocity is linked to a chromosomal region syntenic to the apple Dw1 loci. BMC Plant Biol 15:230. https://doi.org/10.1186/s12870-015-0620-4
Knäbel M, Friend AP, Palmer JW, Diack R, Gardiner SE, Tustin S, Schaffer R, Foster T, Chagné D (2017) Quantitative trait loci controlling vegetative propagation traits mapped in European pear (Pyrus communis L.). Tree Genet Genomes 13:55. https://doi.org/10.1007/s11295-017-1141-0
Le Lézec M, Lecomte P, Laurens F, Michelesi JC (1997) Sensibilité variétale au feu bactérien. L’Arboriculture Fruitière 503:57–62
Le Roux PMF, Christen D, Duffy B, Tartarini S, Dondini L, Yamamoto T, Nishitani C, Terakami S, Lespinasse Y, Kellerhals M, Patocchi A (2012) Redefinition of the map position and validation of a major quantitative trait locus for fire blight resistance of the pear cultivar “Harrow Sweet” (Pyrus communis L.). Plant Breed 131:656–664. https://doi.org/10.1111/j.1439-0523.2012.02000.x
Li L, Ban ZJ, Li XH, Wu MY, Wang AL, Jiang YQ, Jiang YH (2012) Differential expression of anthocyanin biosynthetic genes and transcription factor PcMYB10 in Pears (Pyrus communis L.). PLoS ONE 7:e46070. https://doi.org/10.1371/journal.pone.0046070
Li G, Jia H, Li J, Wang Q, Zhang M, Teng Y (2014a) Emission of volatile esters and transcription of ethylene- and aroma-related genes during ripening of “Pingxiangli” pear fruit (Pyrus ussuriensis Maxim). Sci Hortic 170:17–23. https://doi.org/10.1016/j.scienta.2014.03.004
Li JM, Zheng DM, Li LT, Qiao X, Wei SW, Bai B, Zhang SL, Wu J (2014b) Genome-wide function, evolutionary characterization and expression analysis of sugar transporter family genes in pear (Pyrus bretschneideri Rehd). Plant Cell Physiol 56:1721–1737. https://doi.org/10.1093/pcp/pcv090
Li M, Li L, Dunwell JM, Qiao X, Liu X, Zhang S (2014c) Characterization of the lipoxygenase (LOX) gene family in the Chinese white pear (Pyrus bretschneideri) and comparison with other members of the Rosaceae. BMC Genom 15:1–12. https://doi.org/10.1186/1471-2164-15-444
Li T, Li X, Tan D, Jiang Z, Wei Y, Li J, Du G, Wang A (2014d) Distinct expression profiles of ripening related genes in the “Nanguo” pear (Pyrus ussuriensis) fruits. Sci Hortic 171:78–82. https://doi.org/10.1016/j.scienta.2014.03.054
Li JM, Huang XS, Li LT, Zheng DM, Xue C, Zhang SL, Wu J (2015) Proteome analysis of pear reveals key genes associated with fruit development and quality. Planta 241:1363–1379. https://doi.org/10.1007/s00425-015-2263-y
Lin-Wang K, Bolitho K, Grafton K, Kortstee A, Karunairetnam S, McGhie TK, Espley RV, Hellens RP, Allan AC (2010) An R2R3 MYB transcription factor associated with regulation of the anthocyanin biosynthetic pathway in Rosaceae. BMC Plant Biol 10:50. https://doi.org/10.1186/1471-2229-10-50
Liu L, Chen CX, Zhu YF, Xue L, Liu QW, Qi KJ, Zhang SL, Wu J (2016) Maternal inheritance has impact on organic acid content in progeny of pear (Pyrus spp.) fruit. Euphytica 209:305–321. https://doi.org/10.1007/s10681-015-1627-5
Llorente I, Montesinos E (2006) Brown spot of pear: an emerging disease of economic importance in Europe. Plant Dis 90:1368–1375. https://doi.org/10.1094/PD-90-1368
Lu XP, Liu YZ, Zhou GF, Wei QJ, Hu HJ, Peng SA (2011) Identification of organic acid-related genes and their expression profiles in two pear (Pyrus pyrifolia) cultivars with difference in predominant acid type at fruit ripening stage. Sci Hortic 129:680–687. https://doi.org/10.1016/j.scienta.2011.05.014
Maliepaard C, Alston FH, Van Arkel G, Brown LM, Chevreau E, Dunemann F, Evans KM, Gardiner S, Guilford P, Van Heusden AW, Janse J, Laurens F, Lynn JR, Manganaris AG, Den Nijs APM, Periam N, Rikkerink E, Roche P, Ryder C, Sansavini S, Schmidt H, Tartarini S, Verhaegh JJ, Vrielink-van Ginkel M, King GJ (1998) Aligning male and female linkage maps of apple (Malus pumila Mill.) using multi-allelic markers. Theor Appl Genet 97:60–73. https://doi.org/10.1007/s001220050867
Minamikawa MF, Takada N, Terakami S, Saito T, Onogi A, Kajiya-Kanegae H, Hayashi T, Yamamoto T, Iwata H (2018) Genome-wide association study and genomic prediction using parental and breeding populations of Japanese pear (Pyrus pyrifolia Nakai). Sci Rep 8:11994. https://doi.org/10.1038/s41598-018-30154-w
Montanari S, Saeed M, Knäbel M, Kim YK, Troggio M, Malnoy M, Velasco R, Fontana P, Won KH, Durel CE, Perchepied L, Schaffer R, Wiedow C, Bus V, Brewer L, Gardiner SE, Crowhurst RN, Chagné D (2013) Identification of Pyrus single nucleotide polymorphisms (SNPs) and evaluation for genetic mapping in European pear and interspecific Pyrus hybrids. PLoS ONE 8:1–11. https://doi.org/10.1371/journal.pone.0077022
Montanari S, Guérif P, Ravon E, Denancé C, Muranty H, Velasco R, Chagné D, Bus VGM, Robert P, Perchepied L, Durel CE (2015) Genetic mapping of Cacopsylla pyri resistance in an interspecific pear (Pyrus spp.) population. Tree Genet Genomes 11. https://doi.org/10.1007/s11295-015-0901-y
Montanari S, Perchepied L, Renault D, Frijters L, Velasco R, Horner M, Gardiner SE, Chagné D, Bus VGM, Durel CE, Malnoy M (2016) A QTL detected in an interspecific pear population confers stable fire blight resistance across different environments and genetic backgrounds. Mol Breed 36:47. https://doi.org/10.1007/s11032-016-0473-z
Nashima K, Shimizu T, Nishitani C, Yamamoto T, Takahashi H, Nakazono M, Itai A, Isuzugawa K, Hanada T, Takashina T, Matsumoto S, Otagaki S, Oikawa A, Shiratake K (2013) Microarray analysis of gene expression patterns during fruit development in European pear (Pyrus communis). Sci Hortic 164:466–473. https://doi.org/10.1016/j.scienta.2013.09.054
Nishio S, Hayashi T, Yamamoto T, Yamada M, Takada N, Kato H, Nishitani C, Saito T (2016) Validation of molecular markers associated with fruit ripening day of Japanese pear (Pyrus pyrifolia Nakai) using variance components. Sci Hortic 199:9–14. https://doi.org/10.1016/j.scienta.2015.12.032
Nishio S, Saito T, Terakami S, Takada N, Kato H, Itai A (2018) Identification of QTLs Associated with conversion of sucrose to hexose in mature fruit of Japanese pear. Plant Mol Biol Rep 36(4):643–652. https://doi.org/10.1007/s11105-018-1106-y
Ntladi SM, Human JP, Bester C, Vervalle J, Roodt-Wilding R, Tobutt KR (2018) Quantitative trait loci (QTL) mapping of blush skin and flowering time in a European pear (Pyrus communis) progeny of ‘Flamingo’ × ‘Abate Fetel’. Tree Genet Genomes 14:70. https://doi.org/10.1007/s11295-018-1280-y
Pasqualini E, Civolani S, Musacchi S, Ancarani V, Dondini L, Robert P, Baronio P (2006) Cacopsylla pyri behaviour on new pear selections for host resistance programs. Bull Insectology 59:27–37
Perchepied L, Leforestier D, Ravon E, Guérif P, Denancé C, Tellier M, Terakami S, Yamamoto T, Chevalier M, Lespinasse Y, Durel CE (2015) Genetic mapping and pyramiding of two new pear scab resistance QTLs. Mol Breed 35:197. https://doi.org/10.1007/s11032-015-0391-5
Perchepied L, Guérif P, Ravon E, Denancé C, Laurens F, Robert P, Bouvier L, Lespinasse Y, Durel CE (2016) Polygenic inheritance of resistance to Cacopsylla pyri in a Pyrus communis × P. ussuriensis progeny is explained by three QTLs involving an epistatic interaction. Tree Genet Genomes 12:108. https://doi.org/10.1007/s11295-016-1072-1
Pierantoni L, Cho KH, Shin LS, Chiodini R, Tartarini S, Dondini L, Kang SJ, Sansavini S (2004) Characterisation and transferability of apple SSRs to two European pear F1 populations. Theor Appl Genet 109:1519–1524. https://doi.org/10.1007/s00122-004-1775-9
Pierantoni L, Dondini L, Cho KH, Shin IS, Gennari F, Chiodini R, Tartarini S, Kang SJ, Sansavini S (2007) Pear scab resistance QTLs via a European pear (Pyrus communis) linkage map. Tree Genet Genomes 3:311–317. https://doi.org/10.1007/s11295-006-0070-0
Pierantoni L, Dondini L, De Franceschi P, Musacchi S, Winkel BSJ, Sansavini S (2010) Mapping of an anthocyanin-regulating MYB transcription factor and its expression in red and green pear, Pyrus communis. Plant Physiol Biochem 48:1020–1026. https://doi.org/10.1016/j.plaphy.2010.09.002
Reuscher S, Fukao Y, Morimoto R, Otagaki S, Oikawa A, Isuzugawa K, Shiratake K (2016) Quantitative proteomics-based reconstruction and identification of metabolic pathways and membrane transport proteins related to sugar accumulation in developing fruits of pear (Pyrus communis). Plant Cell Physiol 57:505–518. https://doi.org/10.1093/pcp/pcw004
Saeed M, Brewer L, Johnston J, McGhie TK, Gardiner SE, Heyes JA, Chagné D (2014) Genetic, metabolite and developmental determinism of fruit friction discolouration in pear. BMC Plant Biol 14:241. https://doi.org/10.1186/s12870-014-0241-3
Saito A, Nakazawa N, Suzuki M (2001) Selection of mutants resistant to alternaria blotch from in vitro-cultured apple shoots irradiated with X- and γ-rays. J Plant Physiol 158:391–400. https://doi.org/10.1078/0176-1617-00235
Salvianti F, Bettini PP, Giordani E, Sacchetti P, Bellini E, Buiatti M (2008) Identification by suppression subtractive hybridization of genes expressed in pear (Pyrus spp.) upon infestation with Cacopsylla pyri (Homoptera:Psyllidae). J Plant Physiol 165:1808–1816. https://doi.org/10.1016/j.jplph.2007.12.010
Sanada T, Nishida T, Ikeda F (1988) Resistant mutant to black spot disease of Japanese pear “Nijisseiki” induced by gamma rays. J Jpn Soc Hortic 57:159–166. https://doi.org/10.2503/jjshs.57.159
Sassa H, Kakui H, Miyamoto M, Suzuki Y, Hanada T, Ushijima K, Kusaba M, Hirano H, Koba T (2007) S locus F-box brothers: Multiple and pollen-specific F-box genes with S haplotype-specific polymorphisms in apple and Japanese pear. Genetics 175:1869–1881. https://doi.org/10.1534/genetics.106.068858
Schaart JG, van de Wiel CCM, Lotz LAP, Smulders MJM (2016) Opportunities for products of new plant breeding techniques. Trends Plant Sci 21:438–449. https://doi.org/10.1016/j.tplants.2015.11.006
Shen C, Wang J, Jin X, Liu N, Fan X, Dong C, Shen Q, Xu Y (2017) Potassium enhances the sugar assimilation in leaves and fruit by regulating the expression of key genes involved in sugar metabolism of Asian pears. Plant Growth Regul 83:287–300. https://doi.org/10.1007/s10725-017-0294-z
Song L, Wang Z, Wang Z, Meng G, Zhai R, Cai M, Ma F, Xu L (2016) Screening of cell wall-related genes that are expressed differentially during ripening of pears with different softening characteristics. Postharvest Biol Technol 115:1–8. https://doi.org/10.1016/j.postharvbio.2015.12.012
Terakami S, Shoda M, Adachi Y, Gonai T, Kasumi M, Sawamura Y, Iketani H, Kotobuki K, Patocchi A, Gessler C, Hayashi T, Yamamoto T (2006) Genetic mapping of the pear scab resistance gene Vnk of Japanese pear cultivar Kinchaku. Theor Appl Genet 113:743–752. https://doi.org/10.1007/s00122-006-0344-9
Terakami S, Adachi Y, Iketani H, Sato Y, Sawamura Y, Takada N, Nishitani C, Yamamoto T (2007) Genetic mapping of genes for susceptibility to black spot disease in Japanese pears. Genome 50:735–741. https://doi.org/10.1139/G07-053
Terakami S, Moriya S, Adachi Y, Kunihisa M, Nishitani C, Saito T, Abe K, Yamamoto T (2016) Fine mapping of the gene for susceptibility to black spot disease in Japanese pear (Pyrus pyrifolia Nakai). Breed Sci 66:271–280. https://doi.org/10.1270/jsbbs.66.271
Tian J, Zeng B, Luo SP, Li XG, Wu B, Li J (2016) Cloning, localization and expression analysis of two fw2.2-like genes in small- and large-fruited pear species. J Integr Agric 15:282–294. https://doi.org/10.1016/S2095-3119(15)61075-9
Urrestarazu J, Muranty H, Denancé C, Leforestier D, Ravon E, Guyader A, Guisnel R, Feugey L, Aubourg S, Celton J-M, Daccord N, Dondini L, Gregori R, Lateur M, Houben P, Ordidge M, Paprstein F, Sedlak J, Nybom H, Garkava-Gustavsson L, Troggio M, Bianco L, Velasco R, Poncet C, Théron A, Moriya S, Bink MCAM, Laurens F, Tartarini S, Durel C-E (2017) Genome-wide association mapping of flowering and ripening periods in apple. Front Plant Sci 8:1923. https://doi.org/10.3389/fpls.2017.01923
Wang Z, Meng D, Wang A, Li T, Jiang S, Cong P, Li T (2013) The methylation of the PcMYB10 promoter is associated with green-skinned sport in Max Red Bartlett pear. Plant Physiol 162:885–896. https://doi.org/10.1104/pp.113.214700
Wei S, Tao S, Qin G, Wang S, Tao J, Wu J, Wu J, Zhang S (2016) Transcriptome profiling reveals the candidate genes associated with aroma metabolites and emission of pear (Pyrus ussuriensis cv.). Sci Hortic 206:33–42. https://doi.org/10.1016/j.scienta.2016.04.019
Westigard PH, Westwood MN, Lombard PB (1970) Host preference and resistance of Pyrus species to the pear psylla, Psylla pyricola Foerster. J Am Soc Hortic Sci 95:34–36
Won K, Bastiaanse H, Kim YK, Song JH, Kang SS, Lee HC, Cho KH, Brewer L, Singla G, Gardiner SE, Chagné D, Bus VGM (2014) Genetic mapping of polygenic scab (Venturia pirina) resistance in an interspecific pear family. Mol Breed 34:2179–2189. https://doi.org/10.1007/s11032-014-0172-6
Wu J, Gu C, Khan MA, Wu J, Gao Y, Wang C, Korban SS, Zhang S (2013a) Molecular determinants and mechanisms of gametophytic self-incompatibility in fruit trees of Rosaceae. Crit Rev Plant Sci 32:53–68. https://doi.org/10.1080/07352689.2012.715986
Wu J, Wang Z, Shi Z, Zhang S, Ming R, Zhu S, Khan MA, Tao S, Korban SS, Wang H, Chen NJ, Nishio T, Xu X, Cong L, Qi K, Huang X, Wang Y, Zhao X, Wu J, Deng C, Gou C, Zhou W, Yin H, Qin G, Sha Y, Tao Y, Chen H, Yang Y, Song Y, Zhan D, Wang J, Li L, Dai M, Gu C, Wang Y, Shi D, Wang X, Zhang H, Zeng L, Zheng D, Wang C, Chen M, Wang G, Xie L, Sovero V, Sha S, Huang W, Zhang S, Zhang M, Sun J, Xu L, Li Y, Liu X, Li Q, Shen J, Wang J, Paull RE, Bennetzen JL, Zhang S (2013b) The genome of the pear (Pyrus bretschneideri Rehd.). Genome Res 23:396–408. https://doi.org/10.1101/gr.144311.112
Wu J, Zhao G, Yang Y-N, Le W-Q, Khan MA, Zhang S-L, Gu C, Huang W-J (2013c) Identification of differentially expressed genes related to coloration in red/green mutant pear (Pyrus communis L.). Tree Genet Genomes 9:75–83. https://doi.org/10.1007/s11295-012-0534-3
Wu J, Li LT, Li M, Khan MA, Li XG, Chen H, Yin H, Zhang SL (2014a) High-density genetic linkage map construction and identification of fruit-related QTLs in pear using SNP and SSR markers. J Exp Bot 65:5771–5781. https://doi.org/10.1093/jxb/eru311
Wu J, Wang D, Liu Y, Wang L, Qiao X, Zhang S (2014b) Identification of miRNAs involved in pear fruit development and quality. BMC Genom 15:1–19. https://doi.org/10.1186/1471-2164-15-953
Xu Y, Li X, Lin J, Wang Z, Yang Q, Chang Y (2015) Transcriptome sequencing and analysis of major genes involved in calcium signaling pathways in pear plants (Pyrus calleryana Decne.). BMC Genom 16:1–13. https://doi.org/10.1186/s12864-015-1887-4
Xue H, Shi T, Wang F, Zhou H, Yang J, Wang L, Wang S, Su Y, Zhang Z, Qiao Y, Li X (2017) Interval mapping for red/green skin color in Asian pears using a modified QTL-seq method. Hortic Res 4:17053. https://doi.org/10.1038/hortres.2017.53
Xue H, Wang S, Yao J-L, Zhang X, Yang J, Wang L, Su Y, Chen L, Zhang H, Li X (2018) The genetic locus underlying red foliage and fruit skin traits is mapped to the same location in the two pear bud mutants ‘Red Zaosu’ and ‘Max Red Bartlett’. Hereditas 155:25. https://doi.org/10.1186/s41065-018-0063-7
Yamamoto T, Kimura T, Shoda M, Imai T, Saito T, Sawamura Y, Kotobuki K, Hayashi T, Matsuta N (2002) Genetic linkage maps constructed by using an interspecific cross between Japanese and European pears. Theor Appl Genet 106:9–18. https://doi.org/10.1007/s00122-002-0966-5
Yamamoto T, Terakami S, Takada N, Nishio S, Onoue N, Nishitani C, Kunihisa M, Inoue E, Iwata H, Hayashi T, Itai A, Saito T (2014) Identification of QTLs controlling harvest time and fruit skin color in Japanese pear (Pyrus pyrifolia Nakai). Breed Sci 64:351–361. https://doi.org/10.1270/jsbbs.64.351
Yang YN, Zhao G, Yue WQ, Zhang SL, Gu C, Wu J (2013) Molecular cloning and gene expression differences of the anthocyanin biosynthesis-related genes in the red/green skin color mutant of pear (Pyrus communis L.). Tree Genet Genomes 9:1351–1360. https://doi.org/10.1007/s11295-013-0644-6
Yang YN, Yao GF, Zheng D, Zhang SL, Wang C, Zhang MY, Wu J (2014) Expression differences of anthocyanin biosynthesis genes reveal regulation patterns for red pear coloration. Plant Cell Rep 34:189–198. https://doi.org/10.1007/s00299-014-1698-0
Yang Y, Yao G, Yue W, Zhang S, Wu J (2015) Transcriptome profiling reveals differential gene expression in proanthocyanidin biosynthesis associated with red/green skin color mutant of pear (Pyrus communis L.). Front Plant Sci 6:795. https://doi.org/10.3389/fpls.2015.00795
Yao G, Ming M, Allan AC, Gu C, Li L, Wu X, Wang R, Chang Y, Qi K, Zhang S, Wu J (2017) Map-based cloning of the pear gene MYB114 identifies an interaction with other transcription factors to coordinately regulate fruit anthocyanin biosynthesis. Plant J 92:437–451. https://doi.org/10.1111/tpj.13666
Yu B, Zhang D, Huang C, Qian M, Zheng X, Teng Y, Su J, Shu Q (2012) Isolation of anthocyanin biosynthetic genes in red Chinese sand pear (Pyrus pyrifolia Nakai) and their expression as affected by organ/tissue, cultivar, bagging and fruit side. Sci Hortic 136:29–37. https://doi.org/10.1016/j.scienta.2011.12.026
Zhai R, Wang Z, Zhang S, Meng G, Song L, Wang Z, Li P, Ma F, Xu L (2016) Two MYB transcription factors regulate flavonoid biosynthesis in pear fruit (Pyrus bretschneideri Rehd.). J Exp Bot 67:1275–1284. https://doi.org/10.1093/jxb/erv524
Zhang C, Tanabe K, Wang S, Tamura F, Yoshida A, Matsumoto K (2006) The impact of cell division and cell enlargement on the evolution of fruit size in Pyrus pyrifolia. Ann Bot 98:537–543. https://doi.org/10.1093/aob/mcl144
Zhang SJ, Wu J, Chen H, Gu C, Tao ST, Wu JY, Zhang SL (2011a) Identification of differentially expressed genes in a spontaneous mutant of “Nanguoli” pear (Pyrus ussuriensis Maxim) with large fruit. J Hortic Sci Biotech 86:595–602. https://doi.org/10.1080/14620316.2011.11512809
Zhang X, C Allan A, Yi Q, Chen L, Li K, Shu Q, Su J (2011b) Differential gene expression analysis of Yunnan red pear, Pyrus pyrifolia, during fruit skin coloration. Plant Mol Biol Rep 29:305–314. https://doi.org/10.1007/s11105-010-0231-z
Zhang R, Wu J, Li X, Khan MA, Chen H, Korban SS, Zhang S (2013) An AFLP, SRAP, and SSR genetic linkage map and identification of QTLs for fruit traits in pear (Pyrus L.). Plant Mol Biol Rep 31:678–687. https://doi.org/10.1007/s11105-012-0544-1
Zhang MY, Xue C, Xu L, Sun H, Qin MF, Zhang S, Wu J (2016) Distinct transcriptome profiles reveal gene expression patterns during fruit development and maturation in five main cultivated species of pear (Pyrus L.). Sci Rep 6:1–12. https://doi.org/10.1038/srep28130
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De Franceschi, P., Dondini, L. (2019). Molecular Mapping of Major Genes and QTLs in Pear. In: Korban, S. (eds) The Pear Genome. Compendium of Plant Genomes. Springer, Cham. https://doi.org/10.1007/978-3-030-11048-2_6
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