Abstract
In order to ensure robust fluidic operations and high confidence in the outcome of biochemical experiments, MEDA biochips must be adequately tested before they can be used for bioassay execution. This chapter presents the first approach for testing of MEDA biochips that include both CMOS circuits and microfluidic components. The chapter first presents structural test techniques to evaluate the pass/fail status of each microcell (droplet actuation, droplet maintenance, and droplet sensing) and identify faulty microcells. In order to ensure correct operation of functional units, e.g., mixers and diluters, the chapter also presents functional test techniques to address fundamental MEDA operations, such as droplet dispensing, transportation, mixing, and splitting. The chapter finally evaluates the proposed test methods using simulations as well as experiments for fabricated MEDA biochips.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Li, Z., Lai, K. Y.-T., Yu, P.-H., Ho, T.-Y., Chakrabarty, K., & Lee, C.-Y. (2016) High-level synthesis for micro-electrode-dot-array digital microfluidic biochips. In Proceedings of ACM/IEEE design automation conference (DAC) (pp. 146:1–146:6). New York: ACM.
Hu, K., Ibrahim, M., Chen, L., Li, Z., Chakrabarty, K., & Fair, R. (2015). Experimental demonstration of error recovery in an integrated cyberphysical digital-microfluidic platform. In IEEE biomedical circuits and systems conference (BioCAS) (pp. 1–4).
Li, Z., Lai, K. Y.-T., Yu, P.-H., Chakrabarty, K., Pajic, M., Ho, T.-Y., & Lee, C.-Y. (2016). Error recovery in a micro-electrode-dot-array digital microfluidic biochip. In Proceedings of IEEE/ACM international conference on computer-aided design (ICCAD) (pp. 105:1–105:8).
Lai, K. Y.-T., Shiu, M.-F., Lu, Y.-W., Ho, Y.-C., Kao, Y.-C., Yang, Y.-T., Wang, G., Liu, K.-M., Chang, H.-C., & Lee, C.-Y. (2015). A field-programmable lab-on-a-chip with built-in self-test circuit and low-power sensor-fusion solution in 0.35 μm standard cmos process. In Proceedings of IEEE Asian solid-state circuits conference (A-SSCC) (pp. 1–4).
Li, Z., Lai, K. Y.-T., Yu, P.-H., Chakrabarty, K., Ho, T.-Y., & Lee, C.-Y. (2017). Droplet size-aware high-level synthesis for micro-electrode-dot-array digital microfluidic biochips. IEEE Transactions on Biomedical Circuits and Systems (TBioCAS), 11(3), 612–626.
Li, Z., Dinh, T. A., Ho, T.-Y., & Chakrabarty, K. (2014). Reliability-driven pipelined scan-like testing of digital microfluidic biochips. In Proceedings of IEEE Asian test symposium (ATS) (pp. 57–62).
Xu, T., & Chakrabarty, K. (2007). Functional testing of digital microfluidic biochips. In Proceedings of IEEE international test conference (ITC) (pp. 1–10).
Zhao, Y., Xu, T., & Chakrabarty, K. (2008). Built-in self-test and fault diagnosis for lab-on-chip using digital microfluidic logic gates. In Proceedings of IEEE international test conference (ITC) (pp. 1–10).
Shukla, V., Ali, N. B. Z., Hussin, F. A., & Zwolinski, M. (2013). On testing of MEDA based digital microfluidics biochips. In Proceedings of IEEE Asian symposium of quality electronic design (ASQED) (pp. 60–65).
Shukla, V., Ali, N. B. B. Z., Hussin, F.A., Hamid, N. H., & Sheikh, M. A. (2016). Fault modeling and simulation of MEDA-based digital microfluidics biochips. In Proceedings of IEEE international conference on VLSI design (VLSID) (pp. 469–474).
Li, Z., Lai, K. Y.-T., Yu, P.-H., Chakrabarty, K., Ho, T.-Y., & Lee, C.-Y. (2016). Built-in self-test for micro-electrode-dot-array digital microfluidic biochips. In Proceedings of IEEE international test conference (ITC) (pp. 1–10).
Xu, T., & Chakrabarty, K. (2009). Fault modeling and functional test methods for digital microfluidic biochips. IEEE Transactions on Biomedical Circuits and Systems (TBioCAS), 3, 241–253.
Berry, S., Kedzierski, J., & Abedian, B. (2007). Irreversible electrowetting on thin fluoropolymer films. Langmuir, 23, 12429–12435.
Su, F., Ozev, S., & Chakrabarty, K. (2003). Testing of droplet-based microelectrofluidic systems. In Proceedings of IEEE international test conference (ITC) (pp. 1192–1200).
Su, F., & Chakrabarty, K. (2005). Ensuring the operational health of droplet-based microelectrofluidic biosensor systems. IEEE Sensors Journal, 5, 763–773.
Su, F., Ozev, S., & Chakrabarty, K. (2006) Test planning and test resource optimization for droplet-based microfluidic systems. Journal of Electronic Testing Theory and Application (JETTA), 22(2), 199–210.
Su, F., Hwang, W., Mukherjee, A., & Chakrabarty, K. (2007). Testing and diagnosis of realistic defects in digital microfluidic biochips. Journal of Electronic Testing Theory and Application (JETTA), 23(2–3), 219–233.
Xu, T., & Chakrabarty, K. (2007). Parallel scan-like test and multiple-defect diagnosis for digital microfluidic biochips. IEEE Transactions on Biomedical Circuits and Systems (TBioCAS), 1, 148–158.
Mitra, D., Ghoshal, S., Rahaman, H., Chakrabarty, K., & Bhattacharya, B. B. (2011). Test planning in digital microfluidic biochips using efficient eulerization techniques. Journal of Electronic Testing Theory and Application (JETTA), 27, 657–671.
Lai, K. Y.-T., Yang, Y.-T., & Lee, C.-Y. (2015). An intelligent digital microfluidic processor for biomedical detection. Journal of Signal Processing Systems, 78(1), 85–93.
Guo, R., Huang, Y., & Cheng, W.-T. (2015). Fault dictionary based scan chain failure diagnosis. August 18 2015, uS Patent 9,110,138.
Huang, Y., Guo, R., Cheng, W.-T., & Li, J. C.-M. (2008). Survey of scan chain diagnosis. IEEE Design & Test of Computers, 25, 240–248.
Bushnell, M. M., & Agrawal, V. D. (2000). Essentials of electronic testing for digital, memory and mixed-signal VLSI circuits. Berlin: Springer.
Parpia, Z., Salama, C., & Hadaway, R. (1987). Modeling and characterization of CMOS-compatible high-voltage device structures. IEEE Transactions on Electron Devices (TED), 34, 2335–2343.
Cheng, Y., Jeng, M.-C., Liu, Z., Huang, J., Chan, M., Chen, K., Ko, P. K., & Hu, C. (1997). A physical and scalable IV model in BSIM3v3 for analog/digital circuit simulation. IEEE Transactions on Electron Devices (TED), 44, 277–287.
Li, Y.-M., & Connelly, J. A. (2003). Macromodeling with SPICE for the voltage breakdown behavior in bipolar junction and field-effect transistors. In Proceedings of IEEE southwest symposium on mixed-signal design (pp. 166–169).
Hodges, D. A., & Jackson, H. G. (2005). Analysis and design of digital integrated circuits. New York: Tata McGraw-Hill Education.
Taur, Y., & Ning, T. H. (2013). Fundamentals of modern VLSI devices. Cambridge: Cambridge University Press.
Wang, G., Teng, D., & Fan, S.-K. (2011). Digital microfluidic operations on micro-electrode dot array architecture. IET Nanobiotechnology, 5(4), 152–160.
Bhasker, J., & Samad, T. (1991). The clique-partitioning problem. Computers & Mathematics with Applications, 22, 1–11.
Gross, J. L., & Yellen, J. (2005). Graph theory and its applications. Boca Raton: CRC Press.
Johnston, H. (1976). Cliques of a graph-variations on the bron-kerbosch algorithm. International Journal of Parallel Programming, 5, 209–238.
Su, F., & Chakrabarty, K. (2005). Unified high-level synthesis and module placement for defect-tolerant microfluidic biochips. In Proceedings of ACM/IEEE design automation conference (DAC) (pp. 825–830).
Luo, Y., Chakrabarty, K., & Ho, T.-Y. (2013). Error recovery in cyberphysical digital microfluidic biochips. IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems (TCAD), 32(1), 59–72.
Author information
Authors and Affiliations
Rights and permissions
Copyright information
© 2019 Springer Nature Switzerland AG
About this chapter
Cite this chapter
Li, Z., Chakrabarty, K., Ho, TY., Lee, CY. (2019). Fault Modeling, Structural Testing, and Functional Testing. In: Micro-Electrode-Dot-Array Digital Microfluidic Biochips. Springer, Cham. https://doi.org/10.1007/978-3-030-02964-7_4
Download citation
DOI: https://doi.org/10.1007/978-3-030-02964-7_4
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-030-02963-0
Online ISBN: 978-3-030-02964-7
eBook Packages: EngineeringEngineering (R0)