Abstract
Elemental signatures in microorganisms are influenced by the organism’s growth environment, postharvest modifications, and environmental exchange. It is clear that for organisms of the genus Bacillus, signatures from growth medium have the potential to remain robust for a long enough period of time to be useful from the standpoint of forensic investigation. Analogous to the compositional analysis of bullet lead (CABL), elemental signatures that are statistically indistinguishable between samples do not necessarily imply the samples have identical histories. Thus, the usefulness of elemental analyses lies in developing investigative leads and exonerating suspects rather than linking absolutely a suspect with a sample. More research is required in order to understand the ubiquity of useful signatures among types of organisms, the stability of individual signatures and the potential for overprinting by environmental influences.
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References
Almiral JR (2001) Elemental analysis of glass fragments. In: Caddy B (ed) Forensic analysis of glass and paint: analysis and interpretation. Taylor and Francis, New York, pp 65–83
Goulding J (1999) Elemental analysis of hair for forensic purposes-a personal journey. In: Robertson J (ed) Forensic examination of hair. Taylor and Francis, NY, London, pp 175–204
Committe on Scientific assesment of bullet lead elemental composition comparison, National Research Council (2004) Forensic analysis weighing bullet lead evidence. National Academies, Washington, DC
Redfield AC (1943) On the proportions of organic derivations in sea water and their relation to the composition of plankton. In: Daniel RJ (ed) James Johnstone memorial volume. University, Liverpool, pp 177–192
Coldman JC, McCarthey JJ, Peavey DG (1979) Growth rate influence on the chemical composition of phytoplankton in oceanic waters. Nature 279:210–215
Goldman JC (1986) On phytoplankton growth rates and particulate C:N:P ratios at low light. Limnol Ocean 31:1358–1363
Duchars MG, Attwood MM (1989) The influence of C:N ratio in the growth medium on the cellular composition and regulation of enzyme activity in Hyphomicrobium X. J Gen Microbiol 135:787–793
Egli T, Quayle JR (1986) Influence of the carbon:nitrogen ratio of the growth medium on the cellular composition and the ability of the methylotrophic yeast Hansenula polymorpha to utilise mixed carbon sources. J Gen Microbiol 132:1779–1788
Ballatori N, Madejczyz MS (2006) Transport of nonessential metals across mammalian cell membranes. In: Tamás MJ, Martinoia E (eds) Molecular biology of metal homeostasis and detoxification: from microbes to man. Springer, Newyork, pp 455–483
Wang J, Chen C (2009) Biosorbents for heavy metals removal and their future. Biotechnol Adv 27: 195–226
Fowle DA, Fein JB (2000) Experimental measurements of the reversibility of metal–bacteria adsorption reactions. Chem Geol 168:27–36
Chang JS, Law R, Chang CC (1997) Biosorption of lead, copper, and cadmium by biomass of Pseudomonas aeruginosa PU21. Wat Res 31:1651–1658
Daughney J, Fowle DA, Fortin D (2001) The effect of growth phase on proton and metal adsorption by Bacillus subtilis. Geochim Cosmochim Ac 65: 1025–1035
Fein B, Daughney CJ, Yee N, Davis T (1997) A chemical equilibrium model for metal adsorption onto bacterial surfaces. Geochim Cosmochim Ac 61: 3319–3328
Klimmek S, Stan HJ, Wilke A, Gunke G, Buchholz R (2001) Comparative analysis of the biosorption of cadmium, lead, nickel and zinc by alga. Environ Sci Technol 27:4283–4288
Nacorda JO, Martinez-Goss MR, Torreta NK, Merca FE (2007) Metal resistance and removal by two strains of the green alga, Chlorella vulgaris Beijerinck, isolated from Laguna de Bay, Philippines. J Appl Phycol 19:701–710
Cotoras D, Millar M, Viedma P, Pimentel J, Mestre A (1992) Biosorption of metal ions by Azotobacter vinelandii. W J Microbiol Biotechnol 8:319–323
Yee N, Fein J (2001) Cd adsorption onto bacterial surfaces: a universal adsorption edge? Geochim Cosmochim Ac 65:2037–2042
Fein J, Martin AM, Wightman PG (2001) Metal adsorption onto bacterial surfaces: development of a predictive approach. Geochim Cosmochim Ac 65: 4267–4273
Amaha M, Ordal ZJ (1957) Effect of divalent cations in the sporulation medium on the thermal death rate of Bacillus coagulans var. thermoacidurans. J Bacteriol 74:596–604
Levinson HS, Hyatt MT (1964) Effect of sporulation medium on heat resistance, chemical composition, and germination of Bacillus megaterium spores. J Bacteriol 87:876–886
Marquis RE, Shin SY (1994) Mineralization and responses of bacterial spores to heat and oxidative agents. FEMS Microbiol Rev 14:375–379
Murrell WG (1967) The biochemistry of the bacterial endospore. Adv Microb Physiol 1:133–251
Nicholson WL, Munakata N, Horneck G, Melosh HL, Setlow P (2000) Resistance of Bacillus endospores to extreme terrestrial and extraterrestrial environments. Microbiol Mol Biol Rev 64:548–572
Pelcher EA, Fleming HP, Ordal ZJ (1963) Some characteristics of spores of Bacillus cereus produced by a replacement technique. Can J Microbiol 9:251–258
Slepecky R, Foster JW (1959) Alterations in metal content of spores of Bacillus megaterium and the effect of some spore properties. J Bacteriol 78: 117–123
Kihm DJ, Hutton MT, Hanlin JH, Johnson EA (1990) Influence of transition metals added during sporulation on heat resistance of Clostridium botulinum 113B spores. Appl Environ Microbiol 56:681–685
Stewart MA, Somlyo P, Somlyo AV, Shuman H, Lindsay JA, Murrell WG (1980) Distribution of calcium and other elements in cryosectioned Bacillus cereus T spores, determined by high-resolution scanning electron probe X-ray microanalysis. J Bacteriol 143:481–491
Stewart MA, Somlyo P, Somlyo AV, Shuman H, Lindsay JA, Murrell WG (1981) Scanning electron probe X-ray microanalysis of elemental distributions in freeze-dried cryosections of Bacillus coagulans spores. J Bacteriol 147:670–674
Ghosal S, Fallon SJ, Leighton T, Wheeler KE, Hutcheon ID, Weber PK (2008) Imaging and 3D elemental characterization of intact bacterial spores with high-resolution secondary ion mass spectrometry (NanoSIMS) depth profile analysis. Anal Chem 80:5986–5992
Ghosal Sl, Leighton TJ, Wheeler KE, Hutcheon ID, Weber PK (2010) Spatially resolved characterization of water and ion incorporation in Bacillus spores. Appl Environ Microbiol 76:3275–3282
(https://www.llnl.gov/str/Sep06/pdfs/09_06.2.pdf). Access date 18/09/2010
Velsko SP (2010) Nonbiological measurements on biological agents. In: Budowle B, Schutzer SE, Breeze RG, Keim PS, Morse SA (eds) Microbial forensics, 2nd edn. Elsevier, London, pp 509–525
Michael JR, Brewer LN, Kotula PG (2010) Electron beam-based methods for bioforensic investigations. In: Budowle B, Schutzer SE, Breeze RG, Keim PS, Morse SA (eds) Microbial forensics, 2nd edn. Elsevier, London, pp 421–447
Michael JR (2009) Presentation to the National Research Council scientific review of the FBI anthrax investigation. http://nationalacademies.org/newsroom/nalerts/20090925.
Weber PK, Graham GA, Teslich NE, Moberly Chan W, Ghosal S, Leighton TJ, Wheeler KE (2010) NanoSIMS imaging of Bacillus spores sectioned by focused ion beam. J Microsc 238:189–199
Weber PK (2009) Presentation to the National Research Council scientific review of the FBI anthrax investigation. http://nationalacademies.org/newsroom/nalerts/20090925.
Cliff JB, Jarman KH, Valentine NB, Golledge SL, Gaspar DJ, Wunschel DS, Wahl KL (2005) Differentiation of spores of Bacillus subtilis grown in different media by elemental characterization using time-of-flight secondary ion mass spectrometry. Appl Environ Microbiol 71:6524–6530
Gikunju CM, Lev SM, Birenzvige A, Schaefer DM (2004) Detection and identification of bacteria using direct injection inductively coupled plasma mass spectroscopy. Talanta 62:741–744
Brundle RC, Evans CA, Wilson S (eds) (1992) Encyclopedia of materials characterisation. Butterworth-Heinemann, Stoneham
Nix ABJ, Wilson DW (1990) Assay detection limits: concept, definition, and estimation. Eur J Clin Pharmacol 39:203–206
Carrera M, Zandomeni RO, Sagripanti J-L (2008) Wet and dry density of Bacillus anthracis and other Bacillus species. J Appl Microbiol 105:68–77
Fitzsimons CW, Harte B, Clark RM (2000) SIMS stable isotope measurement: counting statistics and precision. Mineral Mag 64:59–83
http://www.sandia.gov/mission/ste/stories/2009/September%202009/individual%20files/Kotula-Michael-09.pdf. Access date 18/09/2011
http://www.scientificamerican.com/article.cfm?id=sandia-anthrax-mailing-investigation. Access date 18/09/2011
Bhattacharjee Y (2010) Anthrax investigation: silicon mystery endures in solved anthrax case. Science 327:1435
http://www.nature.com/news/2008/080929/full/news.2008.1137.html. Access date 18/09/2011
Goldstein JI, Newbury DE, Joy DC, Lyman CE, Echlin P, Lifshin E, Sawyer L, Michael JR (2003) Scanning electron microscopy and X-ray microanalysis, 3rd edn. Kluwer Academic/Plenum Publishers, New York
Williams DB, Carter CB (2009) Transmission electron microscopy a textbook for materials science. Plenum, Volume IV, New York
Olesik JW (1992) Inductively coupled plasma-optical emission spectroscopy. In: Brundle RC, Evans CA, Wilson S (eds) Encyclopedia of materials characterization. Butterworth-Heinemann, Stoneham, pp 633–644
Streusand BJ (1992) Inductively coupled plasma mass spectroscometry. In: Brundle RC, Evans CA, Wilson S (eds) Encyclopedia of materials characterization. Butterworth-Heinemann, Stoneham, pp 624–632
Dean JR (2005) Practical inductively coupled plasma spectroscopy. Wiley, Chichester
Samuels ACF, DeLucia C, McNesby KL, Miziolek AW (2003) Laser-induced breakdown spectroscopy of bacterial spores, molds, pollens, and protein: initial studies of discrimination potential. Appl Opt 42: 6205–6209
Benninghoven A, Rüdenauer FG, Werner HW (1987) Secondary ion mass spectrometry. Wiley-Interscience, New York
Wilson RG, Stevie FA, Magee CW (1989) Secondary ion mass spectrometry: a practical handbook for depth profiling and bulk impurity analysis. Wiley, New York
Vickerman JC, Briggs D (eds) (2001) ToF-SIMS: surface analysis by mass spectrometry. IM Publications, Chichester
Schaldach CM, Bench G, DeYoreo JJ, Esposito T, Fergenson DP, Ferreira J, Gard E, Grant P, Hollars C, Horn J, Huser T, Kashgarian M, Knezovich J, Lane SM, Malkin AJ, Pitesky M, Talley C, Tobias HJ, Woods B, Wu K-J, Velsko SP (2005) Non-DNA methods for biological signatures. In: Breeze RG, Budowle B, Schutzer SE (eds) Microbial forensics. Elsevier, London, pp 251–294
Hillion F, Daigne B, Girard F, Slodzian G (1993) A new high performance instrument: the CAMECA NanoSIMS 50. In: Benninghoven A, Nihei Y, Shimizu R, Werner HW (eds) Secondary ion mass spectrometry: SIMS IX. Wiley, Chichester, pp 254–257
Davisson ML, Weber PK, Pett-Ridge J, Singer S (2008) Development of standards for NanoSIMS analyses of biological materials. Lawerence Livermore National Laboratory Report. LLNL-TR-406039
Randich E, Duerfeldt W, McLendon W, Tobin W (2002) A metallurgical review of the interpretation of bullet lead compositional analysis. Forensic Sci Int 127:174–191
FBI National Press Office, Washington, D.C, Press release, 1 Sept. 2005
Acknowledgments
Portions of this research were conducted under the Laboratory Directed Research and Development Program of the US Department of Energy. A portion of the research described in the manuscript was performed at the W. R. Wiley Environmental Molecular Sciences Laboratory, a national scientific user facility sponsored by the US Department of Energy’s Office of Biological and Environmental Research, located at Pacific Northwest National Laboratory. The Pacific Northwest National Laboratory is operated by Battelle for the US Department of Energy, under contract DE-AC05-76RLO1830. Support from the National Science Foundation (DMR-0216639) for the TOF-SIMS instrumentation at the University of Oregon is gratefully acknowledged. The authors acknowledge the facilities, scientific and technical assistance of the Australian Microscopy & Microanalysis Research Facility at the Centre for Microscopy, Characterisation and Analysis, The University of Western Australia, a facility funded by the University, State, and Commonwealth Governments. Bacillus samples were prepared by Nancy Valentine, and Tom Farmer conducted ICP-OES and ICP-MS analyses. Bacillus diagram in Fig. 6.1 was created by Jeremy Shaw.
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Cliff, J.B. (2012). Elemental Signatures for Microbial Forensics. In: Cliff, J., Kreuzer, H., Ehrhardt, C., Wunschel, D. (eds) Chemical and Physical Signatures for Microbial Forensics. Infectious Disease. Springer, New York, NY. https://doi.org/10.1007/978-1-60327-219-3_6
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