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Gene Silencing in Plants

Nature’s Defense

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Abstract

Plants have evolved mechanisms to limit viral infections and genomic damage that can occur by the invasion, proliferation, and expression of viruses and mobile genetic elements such as retroelements and transposons (1). Up to 95% of a plant’s genome is comprised of repetitive elements. The mechanisms involved with limiting expression of this “junk” deoxyribonucleic acid (DNA) have significantly hindered progress in agricultural biotechnology because DNA carrying genes of interest is often subjected to the same protective surveillance mechanisms and their expression shut down. This phenomenon, known as gene silencing, can occur immediately following integration of transgenes or over several generations. Gene silencing can affect some or all plants derived from a transgenic event, and expression can be partially or fully turned off.

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References

  1. Matzke, M. A., Mette, M. F., Aufsatz, W., Jakowitsch, J., and Matzke, A. J. M. (2000) Host defenses to parasitic sequences and the evolution of epigenetic control mechanisms. Genetica 107, 271–287.

    Article  Google Scholar 

  2. Matzke, M. A., Matzke, A. J. M., Pruss, G. J., and Vance, V. B. (2001) RNA-based silencing strategies in plants. Curr. Opin. Genet. Dev. 11, 221–227.

    Article  CAS  Google Scholar 

  3. Fagard, M. and Vaucheret, H. (2000) (Trans)gene silencing in plants: how many mechanisms? Annu. Rev. Plant Physiol. Plant Mol. Biol. 51, 167–194.

    Article  CAS  Google Scholar 

  4. Wassenegger, M. (2002) Gene silencing. Int. Rev. Cytol. 219, 61–113.

    Article  CAS  Google Scholar 

  5. Waterhouse, P. M., Wang, M. B., and Finnegan, E. J. (2001) Role of short RNAs in gene silencing. Trends Plant Sci. 6, 1360–1385.

    Article  Google Scholar 

  6. Kumpatla, S. P., Chandrasekharan, M. B., Iyer, L., Li, G., and Hall, T. C. (1998) Genome intruder scanning and modulation systems and transgene silencing. Trends Plant Sci. 3, 97–104.

    Article  Google Scholar 

  7. Meins, F., Jr. (2000) RNA degradation and models for post-transcriptional gene silencing. Plant Mol. Biol. 43, 261–273.

    Article  CAS  Google Scholar 

  8. Muskens, M. W. M., Vissers, A. P. A., Mol, J. N. M., Kooter, J. M., Matzke, M. A., and Matzke, A. J. M. (2000) Role of inverted DNA repeats in transcriptional and post- transcriptional gene silencing. Plant Mol. Biol. 43, 243–260.

    Article  CAS  Google Scholar 

  9. Vaucheret, H. and Fagard, M. (2001) Transcriptional gene silencing in plants: targets, inducers and regulators. Trends Genet. 17, 29–35.

    Article  CAS  Google Scholar 

  10. Matzke, M. A., Aufsatz, W., Kanno, T., Mette, M. F., and Matzke, A. J. M. (2002) Homologydependent gene silencing and host defense in plants. Adv. Genet. 46, 235–275.

    Article  CAS  Google Scholar 

  11. Grewal, S. I. S. and Elgin, S. C. R. (2002) Heterochromatin: new possibilities for the inheritance of structure. Curr. Opin. Genet. Dev. 12, 178–187.

    Article  CAS  Google Scholar 

  12. Baulcombe, D. C. (1999). Fast forward genetics based on virus-induced gene silencing. Curr. Opin. Plant Biol. 2, 109–113.

    Article  CAS  Google Scholar 

  13. Lindbo, J. A., Silva-Rosales, L., Proebsting, W. M., and Dougherty, W. G. (1993) Induction of a highly specific antiviral state in transgenic plants: implications for regulation of gene expression and virus resistance. Plant Cell 5, 1749–1759.

    CAS  Google Scholar 

  14. Smith, H. A., Swaney, S. L., Parks, S. L., Wermsman, E. A., and Dougherty, W. G. (1994) Transgenic plant virus resistance mediated by untranslatable sense RNAs: expression, regulation, and fate of nonessential RNAs. Plant Cell 6, 1441–1453.

    CAS  Google Scholar 

  15. English, J. J., Mueller, E., and Baulcombe, D. C. (1996) Suppression of virus accumulation in trangenic plants exhibiting silencing of nuclear genes. Plant Cell 8, 179–188.

    CAS  Google Scholar 

  16. Mezlaff, M., O’Dell, M., Cluster, P. D., and Flavell, R. B. (1997) RNA-mediated RNA degradation and chalcone synthase A silencing in petunia. Cell 88, 845–854.

    Article  Google Scholar 

  17. Palauqui, J. C. and Vaucheret, H. (1998) Transgenes are dispensable for the RNA degradation step of cosuppression. Proc. Natl. Acad. Sci. USA 95, 9675–9680.

    Article  CAS  Google Scholar 

  18. Meyer, P., Linn, F., Heidmann, I., Meyer, H., Niedenhof, I., and Saedler, H. (1992) Endogenous and environmental factors influence 35S promoter methylation of a maize Al gene construct in transgenic petunia and its colour phenotype. Mol. Gen. Genet. 231, 345–352.

    Article  CAS  Google Scholar 

  19. Meza, T. J., Kamfjord, D., Hakelien, A.-M., et al. (2001) The frequency of silencing in Arabidopsis thaliana varies highly between progeny of siblings and can be influenced by environmental factors. Transgen. Res. 10, 53–67.

    Article  CAS  Google Scholar 

  20. Kunz, C., Schölb, H., Stam, M., Kooter, J. M., and Meins, F., Jr. (1996) Developmentally regulated silencing and reactivation of tobacco chitinase transgene expression. Plant J. 10, 437–450.

    Article  CAS  Google Scholar 

  21. Balandin, T. and Castresana, C. (1997) Silencing of a ß-1,3-glucanase transgene is overcome during seed formation. Plant Mol. Biol. 34, 125–137.

    Article  CAS  Google Scholar 

  22. Dehio, C. and Schell, J. (1994) Identification of plant genetic loci involved in a posttranscriptional mechanism for meiotically reversible transgene silencing. Proc. Natl. Acad. Sci. USA 91, 5538–5542.

    Article  CAS  Google Scholar 

  23. Mitsuhara, I., Shirasawa-Seo, N., Iwai, T., Nakamura, S., Honkura, R., and Ohashi, Y. (2002) Release from post-transcriptional gene silencing by cell proliferation in transgenic tobacco plants: possible mechanism for noninheritance of the silencing. Genetics 160, 343–352.

    CAS  Google Scholar 

  24. Mlotshwa, S., Voinnet, O., Mette, M. F., et al. (2002) RNA silencing and the mobile silencing signal. Plant Cell 14, S289—S301.

    Google Scholar 

  25. Boerjan, W., Bauw, G., van Montagu, M., and Inze, D. (1994) Distinct phenotypes generated by overexpression and suppression of S-adenosyl-L-methionine synthetase reveal developmental patterns of gene silencing in tobacco. Plant Cell 6, 1401–1414.

    CAS  Google Scholar 

  26. Palauqui, J. C., Elmayan, T., Dorlhac de Borne, F., Crete, P., Charles, C., and Vaucheret, H. (1996) Frequencies, timing, and spatial patterns of cosuppression of nitrate reductase and nitrite reductase in transgenic tobacco plants. Plant Physiol. 112, 1447–1456.

    CAS  Google Scholar 

  27. Palauqui, J. C., Elmayan, T., Pollien, J. M., and Vaucheret, H. (1997) Systemic acquired silencing: transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions. EMBO J. 16, 4738–4745.

    Article  CAS  Google Scholar 

  28. Voinnet, O. and Baulcombe, D. C. (1997) Systemic signaling in gene silencing. Nature 389, 553.

    Article  CAS  Google Scholar 

  29. Sonoda, S. and Nishiguchi, M. (2000) Graft transmission of post-transcriptional gene silencing: target specificity for RNA degradation is transmissible between silenced and non-silenced plants, but not between silenced plants. Plant J. 21, 1–8.

    Article  CAS  Google Scholar 

  30. Mitsuhara, I., Shirasawa-Seo, N., Iwai, T., Nakamura, S., Honkura, R., and Ohashi, Y. (2002) Release from post-transcriptional gene silencing by cell proliferation in transgenic tobacco plants: possible mechanism for noninheritance of the silencing. Genetics 160, 343–352.

    CAS  Google Scholar 

  31. Ueki, S. and Citovsky, V. (2001) RNA commutes to work: regulation of plant gene expression by systemically transported RNA molecules. BioEssays 23, 1087–1090.

    Article  CAS  Google Scholar 

  32. Dalmay, T., Hamilton, A., Rudd, S., Angell, S., and Baulcombe, D. C. (2000) An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus. Cell 101 , 543–553.

    Article  CAS  Google Scholar 

  33. Mourrain, P., Beclin, C., Elmayan, T., et al. (2000) Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance. Cell 101, 533–542.

    Article  CAS  Google Scholar 

  34. Bernstein, E., Caudy, A. A., Hammond, S. M., and Hannon, G. J. (2001) Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature 409, 363–366.

    Article  CAS  Google Scholar 

  35. Jacobsen, S. E., Running, M. P., and Meyerowitz, E. M. (1999) Disruption of an RNA helicase/ RNase III gene in Arabidopsis causes unregulated cell division in floral meristems. Development 126, 5231–5243.

    CAS  Google Scholar 

  36. Mette, M. F., Aufsatz, W., Winden, J. v. d., Matzke, M. A., Matzke, A. J. M., and van der Winden, J. (2000) Transcriptional silencing and promoter methylation triggered by doublestranded RNA. EMBO J. 19, 5194–5201.

    Article  CAS  Google Scholar 

  37. Mette, M. F., van der Winden, J., Matzke, M. A., and Matzke, A. J. M. (1999) Production of aberrant promoter transcripts contributes to methylation and silencing of unlinked homologous promoters in trans. EMBO J. 18, 241–248.

    Article  CAS  Google Scholar 

  38. Sijen, T., Vijn, I., Rebocho, A., et al. (2001) Transcriptional and posttranscriptional gene silencing are mechanistically related. Curr. Biol. 11, 436–440.

    Article  CAS  Google Scholar 

  39. Paszkowski, J. and Whitham, S. A. (2001) Gene silencing and DNA methylation processes. Curr. Opin. Plant Biol. 4, 123–129.

    Article  CAS  Google Scholar 

  40. Finnegan, E. J. and Kovac, K. A. (2000) Plant DNA methyltransferases. Plant Mol. Biol. 43, 189–201.

    Article  CAS  Google Scholar 

  41. Luff, B., Pawlowski, L., and Bender, J. (1999) An inverted repeat triggers cytosine methylation of identical sequences in Arabidopsis. Mol. Cell 3, 505–511.

    Article  CAS  Google Scholar 

  42. Diéguez, M. J., Vaucheret, H., Paszkowski, J., and Mittelsten Scheid, O. (1998) Cytosine methylation at CG and CNG sites in not a prerequisite for the initiation of transcriptional gene silencing in plants, but it is required for its maintenance. Mol. Gen. Genet. 259, 207–215.

    Article  Google Scholar 

  43. Finnegan, E. J. and Dennis, E. S. (1993) Isolation and identification by sequence homology of a putative cytosine methyltransferase from Arabidopsis thaliana. Nucleic Acids Res. 21, 2383–2388.

    Article  CAS  Google Scholar 

  44. Finnegan, E. J., Peacock, W. J., and Dennis, E. S. (1996) Reduced DNA methylation in Arabidopsis thaliana results in abnormal plant development. Proc. Natl. Acad. Sci. USA 93, 8449–8454.

    Article  CAS  Google Scholar 

  45. Ronemus, M. J., Galbiati, M., Ticknor, C., Chen, J., and Dellaporta, S. L. (1996) Demethylation-induced developmental pleotropy in Arabidopsis. Science 273, 654–657.

    CAS  Google Scholar 

  46. Jones, L., Ratcliff, F., and Baulcombe, D. C. (2001) RNA-directed transcriptional gene silencing in plants can be inherited independently of the RNA trigger and requires Metl for maintenance. Curr. Biol. 11, 747–757.

    Article  CAS  Google Scholar 

  47. McCullum, C. M., Comai, L., Greene, E. A., and Henikoff, S. (2000) Targeted screening for induced mutations. Nat. Biotechnol. 18, 457.

    Article  Google Scholar 

  48. Lindroth, A. M., Cao, X., Jackson, J. P., et al. (2001) Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation. Science 292, 2077–2080.

    Article  CAS  Google Scholar 

  49. Vongs, A., Kakutani, T., Martienssen, R. A., and Richards, E. J. (1993) Arabidopsis thaliana DNA methylation mutants. Science 260, 1926–1928.

    Article  CAS  Google Scholar 

  50. Kakutani, T., Jeddeloh, J. A., and Richards, E. J. (1995) Characterization of an Arabidopsis thaliana DNA hypomethylation mutant. Nucleic Acids Res. 23, 130–137.

    Article  CAS  Google Scholar 

  51. Jeddeloh, J. A., Stokes, T. L., and Richards, E. J. (1999) Maintenance of genomic methylation requires a SWI2/SNF2-like protein. Nat. Genet. 22, 94–97.

    Article  CAS  Google Scholar 

  52. Kingston, R. E. and Narlikar, G. J. (1999) ATP-dependent remodeling and acetylation as regulators of chromatin fluidity. Genes Devel. 13, 2339–2352.

    Article  CAS  Google Scholar 

  53. Morel, J. B., Mourrain, P., Beclin, C., and Vaucheret, H. (2000) DNA methylation and chromatin structure affect transcriptional and post-transcriptional transgene silencing in Arabidopsis. Curr. Biol. 10, 1591–1594.

    Article  CAS  Google Scholar 

  54. Amedeo, P., Habu, Y., Afsar, K., Scheld, O. M., and Paszkowski, J. (2000) Disruption of the plant gene MOM releases transcriptional silencing of methylated genes. Nature 405, 203–206.

    Article  CAS  Google Scholar 

  55. Mittelsten Scheid, O., Probst, A. V., Afsar, K., and Paszkowski, J. (2002) Two regulatory levels of transcriptional gene silencing in Arabidopsis. Proc. Natl. Acad. Sci. USA 99, 13,659–13,662.

    CAS  Google Scholar 

  56. Stokes, T. L. and Richards, E. J. (2000) Mum’s the word: MOM and modifiers of transcriptional gene silencing. Plant Cell 12, 1003–1006.

    CAS  Google Scholar 

  57. Cao, X. and Jacobsen, S. E. (2002) Role of the Arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing. Curr. Biol. 12, 1138–1144.

    Article  CAS  Google Scholar 

  58. Cao, X. and Jacobsen, S. E. (2002) Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes. Proc. Natl. Acad. Sci. USA 99, 16,491–16,498.

    Article  CAS  Google Scholar 

  59. Allshire, R. (2002) RNAi and heterochromatin: a hushed-up affair. Science 297, 1818–1819.

    Article  CAS  Google Scholar 

  60. Vance, V. and Vaucheret, H. (2001) RNA silencing in plants defense and counterdefense. Science 292, 2277–2280.

    Article  CAS  Google Scholar 

  61. Mallory, A., Smith, T. H., Braden, R., Pruss, G., Bowman, L., and Vance, V. (2002) Suppression of RNA silencing in plants. Mol. Plant Microbe Interact. 3, 141–145.

    CAS  Google Scholar 

  62. Li, H. W. and Ding, S. W. (1999) Viral suppressors of RNA silencing. Curr. Opin. Biotechnol. 12, 150–154.

    Article  Google Scholar 

  63. Carrington, J. C., Kasschau, K. D., and Johansen, L. K. (2001) Activation and suppression of RNA silencing by plant viruses. Virology 281, 1–5.

    Article  CAS  Google Scholar 

  64. Voinnet, O. (2001) RNA silencing as a plant immune system against viruses. Trends Genet. 17, 449–459.

    Article  CAS  Google Scholar 

  65. Anandalakshmi, R., Pruss, G., Ge, X., Marathe, M., Smith, T. H., and Vance, V. (1998) A viral suppressor of gene silencing in plants. Proc. Natl. Acad. Sci. USA 95, 13,079–13,084.

    Article  CAS  Google Scholar 

  66. Brigneti, G., Voinnet, O., Li, W. X., Ji, L. H., Ding, S. W., and Baulcombe, D. C. (1998) Viral pathogenicity determinants are suppressors of transgenic silencing in Nicotiana benthamiana.EMBO J. 17, 6739–6746.

    Article  CAS  Google Scholar 

  67. Kasschau, K. D. and Carrington, J. C. (1998) A counterdefensive strategy of plant viruses: suppression of post-transcriptional gene silencing. Cell 95, 461–470.

    Article  CAS  Google Scholar 

  68. Voinnet, O., Lederer, C., and Baulcombe, D. C. (2000) A viral movement protein prevents spread of the gene silencing signal in Nicotiana benthamiana. Cell 103, 157–167.

    CAS  Google Scholar 

  69. Voinnet, O., Pinto, Y. M., and Baulcombe, D. C. (1999) Suppression of gene silencing: a general strategy used by diverse DNA and RNA viruses of plants. Proc. Natl. Acad. Sci. USA 96, 14,147–14,152.

    Article  CAS  Google Scholar 

  70. Silhavy, D., Molnar, A., Lucioli, A., et al. (2002) A viral protein suppresses RNA silencing and binds silencing-generated, 21- to 25-nucleotide double-stranded RNAs. EMBO J. 21, 3070–3080.

    Article  CAS  Google Scholar 

  71. Anandalakshmi, R., Marathe, M., Ge, X., et al. (2000) A calmodulin-related protein that suppresses posttranscriptional gene silencing in plants. Science 290, 142–144.

    Article  CAS  Google Scholar 

  72. Mallory, A. C., Ely, L., Smith, T. H., et al. (2001) HC-Pro suppression of transgene silencing eliminates the small RNAs but not transgene methylation or the mobile signal. Plant Cell 13, 571–583.

    CAS  Google Scholar 

  73. Llave, C., Kasschau, K. D., and Carrington, J. C. (2000) Virus-encoded suppressor of posttranscriptional gene silencing targets a maintenance step in the silencing pathway. Proc. Natl. Acad. Sci. USA 97, 13,401–13,406.

    Article  CAS  Google Scholar 

  74. Marathe, M., Smith, T. H., Anandalakshmi, R., et al. (2000) Plant viral suppressors of posttranscriptional silencing do not suppress transcriptional silencing. Plant J. 22, 51–59.

    Article  CAS  Google Scholar 

  75. Mette, M. F., Matzke, A. J. M., and Matzke, M. A. (2001) Resistance of RNA-mediated TGS to HC-Pro, a viral suppressor of PTGS, suggests alternative pathways for dsRNA processing. Curr. Biol. 11, 1119–1123.

    Article  CAS  Google Scholar 

  76. Beclin, C., Berthome, R., Palauqui, J. C., Tepfer, M., and Vaucheret, H. (1998) Infection of tobacco or Arabidopsis plants by CMV counteracts systemic post-transcriptional silencing of nonviral (trans) genes. Virology 252, 313–317.

    Article  CAS  Google Scholar 

  77. Guo, H. S. and Ding, S. W. (2002) A viral protein inhibits the long range signaling activity of the gene silencing signal. EMBO J. 21, 398–407.

    Article  CAS  Google Scholar 

  78. Voinnet, O., Rivas, S., Mestre, P., and Baulcombe, D. C. (2003) An enhanced transient expression system in plants based on suppression of gene silencing by the p19 protein of tomato bushy stunt virus. Plant J. 33, 949–956.

    Article  CAS  Google Scholar 

  79. Mallory, A. C., Parks, G., Endres, M. W., et al. (2002) The amplicon-plus system for highlevel expression of transgenes in plants. Nature Biotechnol. 20, 622–625.

    Article  CAS  Google Scholar 

  80. Elmayan, T., Balzergue, S., Béon, F., et al. (1998) Arabidopsis mutants impaired in cosuppression. Plant Cell 10, 1747–1757.

    CAS  Google Scholar 

  81. Morel, J. B., Godon, C., Mourrain, P., et al. (2002) Fertile hypomorphic ARGONAUTE (ago 1) mutants impaired in post- transcriptional gene silencing and virus resistance. Plant Cell 14, 629–639.

    Article  CAS  Google Scholar 

  82. Dalmay, T., Horsefield, R., Braunstein, T. H., and Baulcombe, D. C. (2001) SDE3 encodes an RNA helicase required for post-transcriptional gene silencing in Arabidopsis. EMBO J. 20, 2069–2077.

    Article  CAS  Google Scholar 

  83. Matzke, M. A., Matzke, A. J. M., and Mittelsten Scheid, O. (1994) Inactivation of repeated genes-DNA-DNA interactions? In Homologous Recombination and Gene Silencing in Plants. (Paszkowski, J., ed.). Kluwer, Dordrecht, The Netherlands, pp. 271–307.

    Chapter  Google Scholar 

  84. Colot, V., Maloisel, L., and Rossignol, J. (1996) Interchromosomal transfer of epigenetic states in Ascobolus: transfer of DNA methylation is mechanistically related to homologous recombination. Cell 86, 855–864.

    Article  CAS  Google Scholar 

  85. Matzke, M., Mette, M. F., Jakowitsch, J., et al. (2001) A test for transvection in plants: DNA pairing may lead to trans-activation or silencing of complex heteroalleles in tobacco. Genetics 158, 451–461.

    CAS  Google Scholar 

  86. Wassenegger, M., Heimes, S., Riedel, L., and Sanger, H. L. (1994) RNA-directed de novo methylation of genomic sequences in plants. Cell 76, 567–576.

    Article  CAS  Google Scholar 

  87. Hamilton, A. and Baulcombe, D. C. (1999) A species of small antisense RNA in posttranscriptional gene silencing in plants. Science 286, 950–952.

    Article  CAS  Google Scholar 

  88. Park, Y.-D., Papp, I., Moscone, E. A., et al. (1996) Gene silencing mediated by promoter homology occurs at the level of transcription and results in meiotically heritable alterations in methylation and gene activity. Plant J. 9, 183–194.

    Article  CAS  Google Scholar 

  89. Dieguez, M. J., Vaucheret, H., Paszkowski, J., and Mittelsten Scheid, O. (1998) Cytosine methylation at CG and CNG sites is not a prerequisite for the initiation of transcriptional gene silencing in plants, but it is required for its maintenance. Mol. Gen. Genet. 259, 207–215.

    Article  CAS  Google Scholar 

  90. Vaucheret, H. (1993) Identification of a general silencer for 19S and 35S promoters in a transgenic tobacco plant: 90 bp of homology in the promoter sequence are sufficient for transactivation. C. R. Acad. Sci. Paris 316, 1471–1483.

    CAS  Google Scholar 

  91. Mourrain, P., Beclin, C., and Vaucheret, H. (2000) Are gene silencing mutants good tools for reliable transgene expression or reliable silencing of endogenous genes in plants? Genet. Eng. 22, 155–170.

    Article  CAS  Google Scholar 

  92. de Buck, S., Montagu, M. v., Depicker, A., de Buck, S., and van Montagu, M. (2001) Transgene silencing of invertedly repeated transgenes is released upon deletion of one of the transgenes involved. Plant Mol. Biol. 46, 433–445.

    Article  Google Scholar 

  93. de Buck, S., Depicker, A., and de Buck, S. (2001) Disruption of their palindromic arrangement leads to selective loss of DNA methylation in inversely repeated gus transgenes in Arabidopsis. Mol. Genet. Genom. 265, 1060–1068.

    Article  Google Scholar 

  94. de Buck, S., Depicker, A., and de Buck, S. (2001) Silencing of invertedly repeated transgenes in Arabidopsis thaliana. Meded. Faculteit Landbouwkundige en Toegepaste Biologische Wetenschappen 66 , 393–399.

    Google Scholar 

  95. Matzke, M. A., Mette, M. F., Kunz, C., Jakowitsch, J., and Matzke, A. J. M. (2000) Homology-dependent gene silencing in transgenic plants: links to cellular defense responses and genome evolution. Stadler Genet. Symp. Ser. 22, 141–162.

    Article  Google Scholar 

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Ainley, W.M., Kumpatla, S.P. (2004). Gene Silencing in Plants. In: Parekh, S.R. (eds) The GMO Handbook. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-59259-801-4_9

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  • DOI: https://doi.org/10.1007/978-1-59259-801-4_9

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