Skip to main content

Contextualized Scientific Workflows in the Cloud

  • Chapter
  • First Online:
Context in Computing
  • 881 Accesses

Abstract

Scientific workflow allows automating the workflow procedure through a compilation of known sequences of actions in distributed environments such as the cloud. Preliminary benefits have been seen in realizing scientific workflows on the cloud. However, there is a notable absence of a holistic view in current scientific workflow systems that, on one hand, capture the evolving context when designing workflow models; and on the other hand, help a specific user interact with the system during QoS prediction and dynamic selection of the relevant cloud services. In this chapter, recent works on designing scientific workflows are first reviewed by discussing the opportunities and challenges respectively. The author then proposes a contextualized approach and research directions to improve the designing of scientific workflows in the user-oriented paradigm. Finally, a case study in drug design process is presented to evaluate the contextualized methodology. The contextualized approach could be considered as an effective way of addressing the socio-technical issues in designing scientific workflows in the cloud.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Notes

  1. 1.

    Eclipse Helios Sr2 Packages. Available via: http://www.eclipse.org/downloads/packages/release/helios/sr2.

  2. 2.

    Java Development Kit 1.6.0. Available via: http://www.java.com/en/download/manual.jsp.

  3. 3.

    ActiveBPEL engine. Available via: http://www.activevos.com.

References

  • Brézillon, P.: Task-realization models in contextual graphs. In: Proceeding of Modeling and Using Context: 5th International and Interdisciplinary Conference (CONTEXT’05). Lecture Notes in Computer Science, vol. 3554/2005, pp. 55–68. Springer, Heidelberg (2005)

    Google Scholar 

  • Brézillon, P., Pomerol, J.-C.: Contextual knowledge sharing and cooperation in intelligent assistant systems. Le Trav. Hum. 62(3), 223–246 (1999). doi:10.1.1.33.1224

    Google Scholar 

  • Buyya, R., Yeo, C.S., Venugopal, S., Broberg, J., Brandic, I.: Cloud computing and emerging IT platforms: Vision, hype, and reality for delivering computing as the 5th utility. Future Gener. Comput. Syst. 25(6), 599–616 (2008). doi:10.1016/j.future.2008.12.001

    Article  Google Scholar 

  • Chen, Y., Shoichet, B.K.: Molecular docking and ligand specificity in fragment-based inhibitor discovery. Nat. Chem. Biol. 5(5), 358–364 (2009). doi:10.1038/nchembio.155

    Article  Google Scholar 

  • Fan, X.: Context-oriented scientific workflow and its application. Ph.D Thesis, University Pierre and Marie Curie, France (2011)

    Google Scholar 

  • Fan, X., Zhang, R., Brézillon, P.: Contextualizing workflow in cooperative design. Proceeding of 15th International Conference on Computer Supported Cooperative Work in Design (CSCWD’11), IEEE Computer Society Press, IEEE, pp. 17–22 (2011)

    Google Scholar 

  • Fan, X., Zhang, R., Brézillon, P.: Investigating the feasibility of making contexts explicit in designing cloud workflow. Proceeding of 2013 IEEE 27th International Parallel and Distributed Processing Symposium (IPDPS’13) Workshop on CloudFlow, Boston, Massachusetts, USA, pp. 2121–2128 (2013)

    Google Scholar 

  • Gil, Y., Ratnakar, V., Jihie, K., Moody, J., Deelman, E., Gonzalez, P.A., Groth, P.: Wings: Intelligent workflow-based design of computational experiments. IEEE Intell. Syst. 26(1), 62–72 (2011). doi:10.1109/MIS.2010.9

    Article  Google Scholar 

  • Henricksen, K., Indulska, J.: Developing context-aware pervasive computing applications: Models and approach. J. Pervasive Mob. Comput. 2(1), 37–64 (2006). doi:10.1109/MPRV.2003.1203753

    Article  Google Scholar 

  • Kuang, L., Xia, Y., Mao, Y.: Personalized services recommendation based on context-aware QoS prediction. Proceeding of IEEE 19th International Conference on Web Services (ICWS’12), IEEE Computer Society press, IEEE, pp. 400–406 (2012)

    Google Scholar 

  • Liu, X., Yang, Y., Yuan, D., Zhang, G., Li, W., Cao, D., He, Q., Chen, J.: The design of cloud workflow systems. Springer, New York (2012). ISBN: 978–1-4614-1932–7

    Google Scholar 

  • Phillips-Wrena, G., Morab, M., Forgionnec, G.A., Gupta, J.N.D.: An integrative evaluation framework for intelligent decision support systems. Eur. J. Oper. Res. 195(3), 642–652 (2007) doi:10.1016/j.ejor.2007.11.001

    Article  Google Scholar 

  • Vieira, V., Tedesco, P., Salgado, A.C., Brézillon, P.: Investigating the specifics of contextual elements management: The CEManTIKA approach. In: Kokinov, B., et al. (eds.) Modeling and Using Context (CONTEXT’07), pp. 493–506. Springer-Verlag, Berlin (LNAI 4635) (2007)

    Google Scholar 

  • WfMC: The workflow reference model. Workflow management coalition technical report. WFMC-TC-1003. http://www.wfmc.org/standards/docs/tc003v11.pdf (1995). Accessed 1 Jan 2014

  • Yu, J., Buyya, R.: A taxonomy of workflow management systems for grid computing. J. Grid. Comput. 3(3–4), 171–200 (2005). doi:10.1.1.59.8378

    Article  Google Scholar 

  • Zheng, Z., Zhang, Y., Lyu, M.: Investigating QoS of real-world web services. IEEE Trans. Serv. Comput. 99, 1–10 (2012). doi:10.1109/TSC.2012.34

    Article  Google Scholar 

Download references

Acknowledgments

This work is supported by the grants from Natural Science Foundation of China (61300232), Natural Science Foundation of Gansu Province in China (1208RJZA278), and the Fundamental Research Funds for the Central Universities (lzujbky-2013-40).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Xiaoliang Fan .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2014 Springer Science+Business Media New York

About this chapter

Cite this chapter

Fan, X. (2014). Contextualized Scientific Workflows in the Cloud. In: Brézillon, P., Gonzalez, A. (eds) Context in Computing. Springer, New York, NY. https://doi.org/10.1007/978-1-4939-1887-4_12

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-1887-4_12

  • Published:

  • Publisher Name: Springer, New York, NY

  • Print ISBN: 978-1-4939-1886-7

  • Online ISBN: 978-1-4939-1887-4

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics