Skip to main content

Part of the book series: NATO ASI Series ((NSSA,volume 268))

Abstract

Accurate identification of plant pathogenic nematode species is a vital component of many areas of nematology, from systematic research to regulatory nematology and management. It is especially important for management that does not rely on chemical nematicides. In many cases it is desirable to identify to species single females or juveniles. In other cases, it is desirable to identify the presence of small numbers of juveniles in a complex mixture. A major constraint to developing identification techniques for single females and juveniles has been the small size of the nematodes. The availability of the polymerase chain reaction (PCR) amplification technique has revolutionized many aspects of biology by allowing amplification of specific sequences from minute quantities of DNA. This procedure opens new tools for nematology. For example it is now possible to differentiate juveniles of the major root-knot nematode species based on differences in their mitochondrial spacer regions (Powers and Harris, 1993).

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  • Baldwin, J.G., and Mundo-Ocampo, M., 1991, Heteroderinae, cyst- and non-cyst-forming nematodes, in: “Manual of Agricultural Nematology,” W. R. Nickle, ed., Marcel Dekker, New York.

    Google Scholar 

  • Baum, T.J., Gresshoff, P.M., Lewis, S.A., and Dean, R.A., 1994, Characterization and phylogenetic analysis of four root-knot nematode species using DNA amplification fingerprinting and automated Polyacrylamide gel electrophoresis, Molec. Plant Microbe Interact., in press.

    Google Scholar 

  • Caswell-Chen, E.P., Williamson, V.M., and Wu, F.F., 1992, Random amplified polymorphic DNA analysis of Heterodera cruciferae and H. schachtii populations, J. Nematol. 24:343.

    PubMed  CAS  Google Scholar 

  • Cenis, J.L., 1993, Identification of four major Meloidogyne spp. by random amplified polymorphic DNA (RAPD-PCR), Phytopathology 83:76.

    Article  CAS  Google Scholar 

  • Cenis, J.L., Opperman, C.H., and Triantaphyllou, A.C., 1992, Cytogenetic, enzymatic, and restriction fragment length polymorphism variation of Meloidogyne spp. from Spain, Phytopathology 82:527.

    Article  CAS  Google Scholar 

  • Cui, X., Li, H., Goradia, T.M., Lange, K., Kazazian, Jr., H.H., Galas, D., and Arnheim, N., 1989, Single-sperm typing: determination of genetic distance between the γ g-globin and parathyroid hormone loci by using the polymerase chain reaction and allele-specific oligomers, Proc. Natl. Acad. Sci. USA 86:9389.

    Article  PubMed  CAS  Google Scholar 

  • Eisenback, J.D., and Triantaphyllou, H.H., 1991, Root-knot nematodes: Meloidogyne species and races, in: “Manual of Agricultural Nematology,” W. R. Nickle, ed., Marcel Dekker, New York.

    Google Scholar 

  • Esbenshade, P.R., and Triantaphyllou, A.C., 1990, Isozyme phenotypes for the identification of Meloidogyne species, J. Nematol. 22:10.

    PubMed  CAS  Google Scholar 

  • Fargette, M., Block, V.C., Phillips, M.S., and Trudgill, D.L., 1994, Genetic variation in tropical Meloidogyne species, in: “NATO ARW: Advances in Molecular Plant Nematology,” F. Lamberti, De Georgi, C., and Bird, D. McK., eds., Plenum Press, New York.

    Google Scholar 

  • Goodwin, P.H., and Annis, S.L., 1991, Rapid identification of genetic variation and pathotype of Leptosphaeria maculans by random amplified polymorphic DNA assay, Appl. Environ. Microbiol. 57:2482.

    PubMed  CAS  Google Scholar 

  • Hedrick, P., 1992, Shooting the RAPDs, Nature 355:679.

    Article  Google Scholar 

  • Lange, W., Muller, J., and DeBock, T.S.M., 1993, Virulence in the beet cyst nematode (Heterodera schachtii) versus some alien genes for resistance in beet, Fundam. appl. Nematol. 16:447.

    Google Scholar 

  • Mulvey, R.H., 1972, Identification of Heterodera cysts by terminal and cone top structures, Can. J. of Zool. 50:1277.

    Article  Google Scholar 

  • Pableo, E.C., and Triantaphyllou, A.C., 1989, DNA complexity of the root-knot nematode (Meloidogyne spp.) genome, J. Nematol. 21:260.

    PubMed  CAS  Google Scholar 

  • Paran, I., and Michelmore, R.W., 1993, Development of reliable PCR-based markers linked to downy mildew resistance genes in lettuce, Theor. appl. Genet. 85:985.

    Article  CAS  Google Scholar 

  • Powers, T.O., and Harris, T.S., 1993, A polymerase chain reaction method for identification of five major Meloidogyne species, J. Nematol. 25:1.

    PubMed  CAS  Google Scholar 

  • Smith, M.L., Bruhn, J.N., and Anderson, J.B., 1992, The fungus Armillaria bulbosa is among the largest and oldest living organism, Nature 356:428.

    Article  Google Scholar 

  • Sulston, J., and Hodgekin, J., 1988, Methods, in:“The Nematode Caenorhabditis elegans,” W.B. Wood, ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.

    Google Scholar 

  • Walsh, P.S., Metzinger, D.A., and Higuchi, R., 1991, Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material, BioTechniques 10:506.

    PubMed  CAS  Google Scholar 

  • Welsh, J., and McClelland, M., 1990, Fingerprinting genomes using PCR with arbitrary primers, Nucl. Acids Res. 18:7213.

    Article  PubMed  CAS  Google Scholar 

  • Williams, G.G.K., Kubelik, A.R., Livak, K.J., Rafalski, J.A., and Tingey, S.V., 1990, DNA polymorphisms amplified by arbitrary primers are useful as genetic markers, Nucl. Acids Res. 18:6531.

    Article  PubMed  CAS  Google Scholar 

  • Williams, J.G.K., Rafalski, J.A., and Tingey, S.V., 1993, Genetic analysis using RAPD markers. Methods Enzymol. 218:704.

    Article  PubMed  CAS  Google Scholar 

  • Williamson, V.M., Ho, J.Y., Wu, F.F., Miller, N., and Kaloshian, I., 1994, A PCR-based marker tightly linked to the nematode resistance gene, Mi, in tomato, Theor. appl. Genet., in press.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 1994 Springer Science+Business Media New York

About this chapter

Cite this chapter

Williamson, V.M., Caswell-Chen, E.P., Wu, F.F., Hanson, D. (1994). PCR for Nematode Identification. In: Lamberti, F., De Giorgi, C., Bird, D.M. (eds) Advances in Molecular Plant Nematology. NATO ASI Series, vol 268. Springer, Boston, MA. https://doi.org/10.1007/978-1-4757-9080-1_11

Download citation

  • DOI: https://doi.org/10.1007/978-1-4757-9080-1_11

  • Publisher Name: Springer, Boston, MA

  • Print ISBN: 978-1-4757-9082-5

  • Online ISBN: 978-1-4757-9080-1

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics