Skip to main content

Exploring Chromosomes by In Situ Biochemical Reactions

  • Chapter
Chromosome Biology
  • 318 Accesses

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 169.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 219.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

Bibliography

Section 19.1

  • Boehringer Mannheim 1994 Biochemicals Catalog.

    Google Scholar 

  • Harlow, E., Lane, D. 1988. Antibodies—A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.

    Google Scholar 

  • Hill, R.J. 1991. Z-DNA: a prodrome for the 1990’s. J. Cell Sci. 99: 675–680.

    PubMed  CAS  Google Scholar 

  • Hill, R.J., Stollar, B.D. 1983. Dependence of Z-DNA antibody binding to polytene chromosomes on acid fixation and DNA torsional strain. Nature 305: 338–340.

    Article  PubMed  CAS  Google Scholar 

  • Holt, S.J., O’Sullivan, D.G. 1958. Studies in cytochemistry I. Principles of cytochemical staining methods. Proc. Roy. Soc. London Ser. B 148: 465–480.

    Article  CAS  Google Scholar 

  • Holt, S.J., Sadler, P.W. 1958. Studies in cytochemistry II. Synthesis of indigogenic substrates for esterases. Proc. Roy. Soc. London Ser. B 148: 481–494.

    Article  CAS  Google Scholar 

  • Manuelidis, L., Langer-Safer, P.R., Ward, D.C. 1982. High-resolution mapping of satellite DNA using biotin-labeled DNA probes. J. Cell Biol. 95: 619–625.

    Article  PubMed  CAS  Google Scholar 

  • Ringertz, N.R., Carlsson, S-A, Ege, T., Bolund, L. 1971. Detection of human and chick nuclear antigens in nuclei of chick erythrocytes during reactivation in heterokaryons with HeLa cells. Proc. Natl. Acad. Sci. USA 68: 3228–3232.

    Article  PubMed  CAS  Google Scholar 

  • Vázquez Nin, G.H., Flores, E., Echeverría, O.M., Merkert, H., Wettstein, R., Benavente, R. 1993. Immunocytochemical localization of DNA in synaptonemal complexes of rat and mouse spermatocytes and chick oocytes. Chromosoma 102: 457–463.

    Article  PubMed  Google Scholar 

Section 19.2

  • Appels, R. 1989. Three dimensional arrangements of chromatin and chromosomes: old concepts and new techniques. J. Cell Sci. 92: 325–328.

    PubMed  Google Scholar 

  • Bauwens, S. 1994. Procedure for whole mount fluorescence in situ hybridization of interphase nuclei in Arabidopsis thaliana. Plant J. 6: 123–131.

    Article  Google Scholar 

  • Bouffler, S.D. 1994. Whole-chromosome hybridization. Int. Rev. Cytol. 153: 171–232.

    Article  PubMed  CAS  Google Scholar 

  • Dominguez-Steglich, M., Carrier, A., Auffray, C., Schmid, M. 1992. Assignment of the chicken tyrosine hydroxylase gene to chromosome 6 by FISH. Cytogenet. Cell Genet. 60: 138–139.

    Article  CAS  Google Scholar 

  • Engler, J.A., Montagu, M.V., Engler, G. 1994. Hybridization of whole-mount messenger RNA in plants. Plant Mol. Biol. Rep. 12: 321–331.

    Article  CAS  Google Scholar 

  • Franz, P.F., Alonso-Blanco, C., Liharska, T.B., Peeters, A.J.M., Zabel, P. P., De Jong, J.H. 1996. High resolution physical mapping in higher plants by fluorescence in situ hybridization to extended DNA fibres. Plant J. 9: 421–430.

    Article  Google Scholar 

  • Heiskanen, M., Peltonen, L., Palotie, A.. 1996. Visual mapping by high resolution FISH. Trends Genet. 12: 379–382.

    Article  PubMed  CAS  Google Scholar 

  • Hopman, A.H.N., Wiegant, J., Raap, A.K., Landegent, J.E., Van Der Ploeg, M., Van Duijn, P. 1986. Bi-color detection of two target DNAs by non-radioactive in situ hybridization. Histo-chemistry 85: 1–4.

    CAS  Google Scholar 

  • Kallioniemi, A., Kallioniemi, O.-P., Waldman, F.M., Chen, L.-C., Yu, L.-C., Fung, Y.K.T., Smith, H.S., Pinkel, D., Gray, J.W. 1992. Detection of retinoblastoma gene copy number in metaphase chromosomes and interphase nuclei by fluorescence in situ hybridization. Cytogenet. Cell Genet. 60: 190–193.

    Article  PubMed  CAS  Google Scholar 

  • Leitch, I.J., Leitch, A.R., Heslop-Harrison, J.S. 1991. Physical mapping of plant DNA sequences by simultaneous in situ hybridization of two differently labeled fluorescent probes. Genome 34: 329–333.

    Article  Google Scholar 

  • Lichter, P., Tang, C-J.C., Call, K., Hermanson, G., Evans, G.A., Housmann, D., Ward, D.C. 1990. High-resolution mapping of human chromosome 11 by in situ hybridization with cosmid clones. Science 247: 64–69.

    Article  PubMed  CAS  Google Scholar 

  • Mukai, Y., Nakahara, Y., Yamamoto, M. 1993. Simultaneous discrimination of the three genomes in hexaploid wheat by multicolor fluorescence in situ hybridization using total genomic and highly repeated DNA probes. Genome 36: 489–494.

    Article  PubMed  CAS  Google Scholar 

  • Raap, A.K., Van De Corput, M.P.C., Vervenne, R.A.W., Van Gijlswijk, R.P.M., Tanke, H.J., Wiegant, J. 1995. Ultra-sensitive FISH using peroxidase-mediated deposition of biotin-or fluorochrome-tyramides. Human Molec. Genet. 4: 529–534.

    Article  CAS  Google Scholar 

  • Rawlins, D. J., Highett, M.I., Shaw. P.J. 1991. Localization of telomeres in plant interphase nuclei by in situ hybridization and 3D confocal microscopy. Chromosoma 100: 424–431.

    Article  Google Scholar 

  • Schwarzacher, T., Heslop-Harrison, J.S. 1992. In situ hybridization to plant telomeres using synthetic oligomers. Genome 34: 317–323.

    Article  Google Scholar 

  • Skerritt, J., Appels, R. 1995. New Diagnostics in Crop Sciences. CAB International, Biotechnology in Agriculture No. 13, Cambridge University Press, Cambridge.

    Google Scholar 

  • Smith, E., Robson, L., Schwanitz, G. 1992. Fluorescence in situ hybridization. Today’s Life Science, October, pp. 56–63.

    Google Scholar 

  • Van Dekken, H., Pinkel, D., Mullikin, J., Gray, J.W. 1988. Enzymatic production of single-stranded DNA as a target for fluorescent in situ hybridization. Chromosoma 97: 1–5.

    Article  PubMed  Google Scholar 

Section 19.3

  • Thiry, M. 1992. Ultrastructural detection of DNA within the nucleolus by sensitive molecular immunocytochemistry. Exp. Cell Res. 200: 135–144.

    Article  PubMed  CAS  Google Scholar 

Section 19.4

  • Don, R.H., Cox, P.T., Wainwright, B.J., Baker, K., Mattick, J.S. 1991. “Touchdown” PCR to circumvent spurious priming during gene amplification. Nucleic Acids Res. 19: 4008–4015.

    Article  PubMed  CAS  Google Scholar 

  • Ferré, F., Marchese, A., Pezzoli, P., Griffin, S., Buxton, E., Boyer, V. 1994. Quantitative PCR: an overview. In: The Polymerase Chain Reaction (Mullis, K., Ferré, F., Gibbs, R.A., eds.). Birkhäuser, Boston. pp. 69–81.

    Google Scholar 

  • Gosden, J., Lawson, D. 1994. Rapid chromosome identification by oligonucleotide-primed in situ DNA synthesis (PRINS). Human Mol. Genet. 3: 931–936.

    Article  CAS  Google Scholar 

  • Hofler, H. 1993. In situ polymerase chain reaction: toy or tool. Histochemistry 99: 103–104.

    Article  PubMed  CAS  Google Scholar 

  • Koch, J., Hindkjaer, J., Mogensen, J., Kolvraa, S., Bolund, L. 1991. An improved method for chromosome-specific labeling of α-satellite in situ by using denatured double-stranded DNA probes as primers in a primed in situ labeling (PRINS) procedure. Genet. Anal.: Tech. Appl. 8: 171–178.

    CAS  Google Scholar 

  • Long, A.A., Komminoth, P., Lee, E., Wolfe, H.J. 1993. Comparison of indirect and direct in situ polymerase chain reaction in cell preparations and tissue sections. Histochemistry 99: 151–162.

    Article  PubMed  CAS  Google Scholar 

  • Moore, G.P.M., Ringertz, N.R. 1973. Localization of DNA-de-pendent RNA polymerase activity in fixed human fibroblasts by autoradiography. Exp. Cell Res. 76: 223–228.

    Article  PubMed  CAS  Google Scholar 

  • Mullis, K. 1987. U.S. Patent 4683202: process for amplifying nucleic acid sequences.

    Google Scholar 

  • Saiki, R.K., Gelfand, D.H., Stoffel, S., Scharf, S.J., Higuchi, R., Horn, G.T., Mullis, K.B., Erlich, H.A. 1988. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239: 487–491.

    Article  PubMed  CAS  Google Scholar 

  • Speel, E.J.M., Lawson, D., Hopman, A.H.N. 1995. Multi-PRINS: multiple sequential oligonucleotide primed in situ DNA synthesis reactions label specific chromosomes and produce bands. Human Genet. 95: 29–33.

    Article  CAS  Google Scholar 

  • Xie, H., Troyer, D.L. 1996. Chemiluminescent detection of unique sequences on chromosomes after on-slide PCR. Biotechniques 20: 54–56.

    PubMed  CAS  Google Scholar 

Section 19.5

  • Aldrich Chemical Company Inc. 1989. Catalogue: handbook of fine chemicals.

    Google Scholar 

  • Darlington, C.D., La Cour, L.F. 1975. The Handling of Chromosomes, 6th ed. John Wiley & Sons, New York.

    Google Scholar 

Section 19.6

  • Jefferson, R. A., Kavanaugh, T.A., Bevan, M.W. 1987. GUS fusions: β-glucoronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 6: 3901–3907.

    PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

Copyright information

© 1998 Springer Science+Business Media New York

About this chapter

Cite this chapter

Appels, R., Morris, R., Gill, B.S., May, C.E. (1998). Exploring Chromosomes by In Situ Biochemical Reactions. In: Chromosome Biology. Springer, Boston, MA. https://doi.org/10.1007/978-1-4615-5409-7_19

Download citation

  • DOI: https://doi.org/10.1007/978-1-4615-5409-7_19

  • Publisher Name: Springer, Boston, MA

  • Print ISBN: 978-1-4613-7470-1

  • Online ISBN: 978-1-4615-5409-7

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics