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Metal Amine Carboxylates as Hydronium Ion Traps. Part 5.1. The Structure of K1/2(H5O2)1/2{(−)D-trans-(O6)-[Co(1,3-SS-pddadp)]}· 2H2O (I) Determined at 18°C and −100°C and of Li{(−)D-trans-(O6)-[Co(1,3-SS-pddadp)]}·7H2O (II) AT 18°C. Intra- and Intermolecular Interactions in the Crystallization of Metal Diamine Carboxylates and on Hydronium Ion Traps

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Intermolecular Interactions

Abstract

Optically pure (I), CoK0.5O11N2C13H24.5, crystallizes in the orthorhombic system, space group P21212, in acell whose characteristics, at 18°C, area = 16.614(2), b = 12.250(2) and c = 9.068(2) Ä; V = 1845.4 Ä3, d(calc, z = 4,M.W. = 433.865g mol−1) = 1.561 g cm−3. At −100°C, the cell constants are: a = 16.555(2), b = 12.161(2), c = 9.027(3) Ä; V = 1817.28, d(z = 4,M.W. = 433.865 g mol−1) = 1.694 g cm−3. For the 18°C set, a total of 2564 data were collected in the range 4° ≤ 20 ≤ 55° which were corrected for LP factors and absorption effects (psi scans, μ = 6.630 cm−1; rel. trans. coeff. range from 0.9446 to 0.9999); of these, 1562 were unique and had I ≥ 3σ(I) and were used throughout the calculations described. The absolute configuration was determined from refinements of the solution (+ + +) and inverted configuration (−−−). During the test, the R(F) and R W (F) indices were, respectively, (+ + +)= 0.0473 and 0.0618 and (−−−) = 0.0525 and 0.0644. The final R(F) and R W (F) values were, respectively, 0.0443 and 0.0527. The same crystal, on the same goniometer head, was used for low temperature data collection, which refined to final R(F) and R W (F) values of 0.0644 and 0.0756. Coordinates from the absolute determination at 18°C were used as trial coordinates for the low temperature data set, which refined immediately. It is interesting to note that, initially, the salt was prepared as the pure potassium salt but that upon purification (Dowex50 column, chloride form) the salt was isolated as the double potassium-hydronium derivative. The compound, as a racemate, crystallizes as racemic crystals in the monoclinic system (P21/c) and does not form the hydronium salt (see ref. 20).

Optically pure (II), LiCoO15N2C13H32, crystallizes in the orthorhombic system, space group P212121,in a cell whose edges are a = 7.361 (3), b = 3.150(2) and c = 22.503(2) Ä; V = 2178.18 Ä3, d(calc.,z = 4,M.W. = 522.28 g mol−1) = 1.593 g cm−3. A total of 3015 data were collected in the range 4° ≤ 20 ≤ 56° which were corrected for LP factors and absorption effects (psi scans, μ = 8.574 cm−1; rel. trans. coeff. range from 0.9570 to 0.9980); of these, 1628 were unique and had I ≥ 3σ(I) and were used throughout the calculations described. The absolute configuration was determined from refinements of the solution (+ + +) and inverted configuration (−−−). During the test, the R(F) and R W (F) indices were, respectively, (+ + +) = 0.0443 and 0.0491 and (−−−) = 0.0524 and 0.0553. The final R(F) and R W (F) values were, respectively, 0.0399 and 0.0453. As a racemate, the compound crystallizes as a racemate in the triclinic space group PĪ (unpublished results, see ref. 21).

We were interested in observing the mode of crystallization as a function of changes in the length of the methylene chains in the amine and carboxylato fragments. In the effect on packing by changing the charge compensating cations (do they cause changes in the mode of crystallization; e.g., racemic to conglomerate?). And, also, in establishing the absolute configuration of the anions in order to correlate this information to the spectrochemical data (CD) of the anions. Upon realizing that they would not crystallize as conglomerates, we were forced to use pre-resolved ligands to prepare the anions.

On Leave from the Technical University of Wroclaw, I-5, Wroclaw, Poland

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References

  1. (H3O+)[Co(en)2oxolato]C12H2O, I. Bernai, J. Cai and J. Myrczek, Polyhedron, 12:1157 (1993).

    Article  Google Scholar 

  2. (H5O+ 2)[cis-α-Co(edda)ox], I. Bemal, J. Cai and W. T. Jordan, J. Coordinat. Chem. 37:283 (1996).

    Article  Google Scholar 

  3. (H5O+ 2)[trans-Co(β-alaninato)2(NO2)2, I. Bernai, J. Cai, F. Somoza, and S. S. Massoud, Inorg. Chim. Acta in press (1997).

    Google Scholar 

  4. (H9O+ 4)[cis-dinitro-Co(trans-N-N-glycinato)2]2, F. Somoza, J. Cai, and I. Bernai, J. Coord. Chem. in press (1997).

    Google Scholar 

  5. I. Bernai, J. Cetrullo, J. Myrczek, J. Cai and W. T. Jordan, J. Chem. Soc. DALTON, 1771 (1993).

    Google Scholar 

  6. H. A. Weakliem and J. L. Hoard, J. Amer. Chem. Soc. 81:549 (1959).

    Article  Google Scholar 

  7. T. Lis, Acta Crystal. B34:1342 (1978).

    Article  Google Scholar 

  8. J. Stein, and J. P. Fackler, Jr., Inorg. Chem. 18:3511 (1979).

    Article  Google Scholar 

  9. T. N. Poljanova, N. P. Bel’skaya, D. Tyurk de De Garcia Baños, M. A. Porai-Koshits, and L. I. Martynenko, J. Struct. Chem. 11:158 (1970).

    Article  Google Scholar 

  10. J. J. Stezowski, R. Countryman, and J. L. Hoard, Inorg. Chem. 12:1749 (1973).

    Article  Google Scholar 

  11. R. Nagao, F. Marumo, and Y. Saito, Acta Crystal. B28:1852 (1972).

    Article  Google Scholar 

  12. S. Ikaki, Y. Sasaki, A. Nagasawa, C. Kabuto, and T. Ito, Inorg. Chem. 28:1248 (1989).

    Article  Google Scholar 

  13. M. Cotrait, Acta Crystal. B26:107 (1970).

    Google Scholar 

  14. E. O. Schlemper, J. Cryst. Mol. Struct. 7:81 (1977).

    Article  Google Scholar 

  15. F. P. van Remortere, J. J. Flynn, F. P. Boer, and P. P. North, Inorg. Chem. 10:1511 (1971).

    Article  Google Scholar 

  16. S. H. Whitlow, Inorg. Chem. 12:2286 (1973).

    Article  Google Scholar 

  17. V. V. Fomenko, L. I. Kopaneva, M. A. Porai-Koshits, and T. N. Polyanova, J. Struct. Chem. 25:344 (1974).

    Google Scholar 

  18. B. L. Barnett and V. A. Uchtman, Inorg. Chem. 18:2674 (1979).

    Article  Google Scholar 

  19. J. C. Robles, Y. Atsuzaka, S. Inomata, M. Shimoi, W. Mori, and H. Ogino, Inorg. Chem. 32:13 (1993).

    Article  Google Scholar 

  20. R. Herak, G. Srdanov, M. Djuran, D. J. Radanović and M. Bruvo, Inorg. Chim. Acta 83:55 (1984).

    Article  Google Scholar 

  21. X. Solans, S. Gali, M. Font-Altaba, J. Oliva, and J. Herrera, 1988, Afinidad 45:243 (1988).

    Google Scholar 

  22. Private communication by Professor H. Ogino, Tohoku University, whom we thank. This study is not in the Cambridge Structural Database (ref. 19), release of April, (1997).

    Google Scholar 

  23. Cambridge Structural Database: F. H. Allen, J. E. Davies, J. J. Galloy, O. Johnson. O. Kennard, C. F. Macrae, E. M. Mitchell, G. F. Mitchell, J. M. Smith, and D. G. Watson, 1991, J. Chem. Info. Comp. Sci. 31:187. Version released April (1991)

    Article  Google Scholar 

  24. M. Parvez, C. Maricondi, D. J. Radanovic, S. R. Trifunović, V. D. Miletić and B. E. Douglas, Inorg. Chim. Acta 248:89 (1996).

    Article  Google Scholar 

  25. I. Bernai, unpublished results. Space group, triclinic PĪ, a = 7.3189(2), b = 11.0747(2), c = 11.8449(1), a = 86.61(1), b = 85.24(3), c = 78.50(2), z = 2, d = 1.593 g cm−3 (which, interestingly, is identical with that of our (II)).

    Google Scholar 

  26. D. J. Radanović, S. R. Trifunović, M. C. Cvijović, C. Maricondi, and B. E. Douglas, Inorg. Chim. Acta 196:161 (1992).

    Article  Google Scholar 

  27. TEXRAY-230 is a a modification of the SDP-Plus24 set of X-ray crystallographic programs distributed by Molecular Structure Corporation, 3200 Research Forest Dr., The Woodlands, TX 77386 for use with their automation of the CAD-4 diffractometer.

    Google Scholar 

  28. SDP-Plus is the Enraf-Nonius Corporation X-ray diffraction data processing programs distributed by B. A. Frenz & Associates, 1140 East Harvey Road, College Station, TX, 77840.

    Google Scholar 

  29. R. B. Roof. “A Theoretical Extension of the Reduced Cell Concept in Crystallography”, Report LA-4038, Los Alamos Scientific Laboratory (1969).

    Google Scholar 

  30. D. T. Cromer and J. T. Waber. “International Tables for X-Ray Crystallography”, The Kynoch Press, Birmingham, England; vol. IV, Tables 2.2.8 and 2.3.1, respectively, for the scattering factor curves and the anomalous dispersion values (1979).

    Google Scholar 

  31. H. Okazaki, K. Yomioka, and H. Yoneda, Inorg. Chim. Acta 74:169 (1983).

    Article  Google Scholar 

  32. R.S. Cahn, C. Ingold, and V. Prelog, Angew. Chem. 78:413; and Angew. Chem. Int. Ed. Engl. 5:385 (1996).

    Google Scholar 

  33. I. Bernal, J. Cetrullo, J. Myrczek, and S.S. Massoud, J. Coord. Chem. 30:29 (1993).

    Article  Google Scholar 

  34. I. Bernal, J. Cetrullo, J. Myrczek, and S. S. Massoud, J. Coord. Chem. 29:287 (1993).

    Article  Google Scholar 

  35. D. J. Radanović, M. I. Djuran, T. S. Kostić, and B. E. Douglas, Inorg. Chim. Acta 211:149 (1992).

    Article  Google Scholar 

  36. D. J. Radanović, M. I. Djuran, T. S. Kostić, C. Maricondi and B. E. Douglas, Inorg. Chim. Acta 196:161 (1992).

    Article  Google Scholar 

  37. D. J. Radanović, S. R. Trifunović, C. Maricondi and B. E. Douglas, Inorg. Chim. Acta 219:147 (1994).

    Article  Google Scholar 

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Bernal, I., Cetrullo, J., Myrczek, J., Ricci, J.S., Radanović, D.J., Trifunović, S.R. (1998). Metal Amine Carboxylates as Hydronium Ion Traps. Part 5.1. The Structure of K1/2(H5O2)1/2{(−)D-trans-(O6)-[Co(1,3-SS-pddadp)]}· 2H2O (I) Determined at 18°C and −100°C and of Li{(−)D-trans-(O6)-[Co(1,3-SS-pddadp)]}·7H2O (II) AT 18°C. Intra- and Intermolecular Interactions in the Crystallization of Metal Diamine Carboxylates and on Hydronium Ion Traps. In: Gans, W., Boeyens, J.C.A. (eds) Intermolecular Interactions. Springer, Boston, MA. https://doi.org/10.1007/978-1-4615-4829-4_13

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