Abstract
DNA polymerases are not able to initiate de novo DNA synthesis on a DNA template but require the existence of a primer containing a free hydroxyl group to start DNA elongation (1). On the contrary, RNA polymerases are known to initiate de novo RNA synthesis. The first mechanism shown to prime DNA synthesis was the use of an RNA primer synthesized either by an RNA polymerase or by specific enzymes, the primases. These RNA primers, either short RNAs, nascent RNAs or tRNAs, provide the 3′-hydroxyl (3′-OH) group needed by the DNA polymerase to elongate the DNA chain. Another mechanism is the use of the 3′-OH group provided by the DNA itself. A third type of primer for DNA synthesis is the hydroxyl group of a specific serine, threonine or tyrosine residue of a protein (2).
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References
Kornberg, A. and Baker, T. (1992) DNA Replication, W.H. Freeman, New York, NY.
Salas, M., Miller, J.T., Leis, J. and DePamphilis, M.L. (1996) in DNA Replication in Eukaryotic Cells. (M. DePamphilis, ed.) pp. 131–176, Cold Spring Harbor Press, Cold Spring Harbor, NY.
Salas, M. (1991), Annu. Rev. Biochem., 60, 39–71.
Lin, Y.S., Kieser, H.M., Hopwood, D.A. and Chen, C.W. (1993) Mol. Microbiol. 10, 923–933.
Salas, M., Mellado, R.P., Viñuela, E. and Sogo, J.M. (1978) J. Mol. Biol. 119, 269–291.
Hermoso, J.M., Méndez, E., Soriano, F. and Salas, M. (1985) Nucl. Acids Res. 13, 7715–7728.
Inciarte, M.R., Salas, M. and Sogo, J.M. (1980) J. Virol. 34, 187–190.
Bravo, A. and Salas, M. (1997) J. Mol. Biol. 269, 102–112.
Crucitti, P., Lázaro, J.M., Benes, V. and Salas, M. (1998) Gene (in press).
Salas, M., (1988) in The Bacteriophages (R. Calendar, ed.) Vol. I, pp. 169–191, Plenum Publishing Corporation, New York, NY.
Matsumoto, K., Saito, T. and Hirokawa, H. (1983) Mol. Gen. Genet. 191, 26–30.
Blanco, L. and Salas, M. (1984) Proc. Nat. Acad. Sci. U.S.A. 81, 5325–5329.
Blanco, L., Prieto, I., Gutiérrez, J., Bernad, A., Lázaro, J.M., Hermoso, J.M. and Salas, M. (1987) J. Virol. 61, 3983–3991.
Blanco, L. and Salas, M. (1985) Proc. Nat. Acad. Sci. U.S.A. 82, 6404–6408.
Blanco, L., Bernad, A., Lázaro, J.M., Martín, G., Garmendia, C. and Salas, M. (1989) J. Biol. Chem. 264, 8935–8940.
Garmendia, C., Bernad, A., Esteban, J.A., Blanco, L. and Salas, M. (1992) J. Biol. Chem. 267, 2594–2599.
Garmendia, C., Salas, M. and Hermoso, J.M. (1988) Nucl. Acids Res. 16, 5727–5740.
Illana, B., Zaballos, A., Blanco, L. and Salas, M. (1998) Virology 248, 12–19.
Bravo, A., Hermoso J.M. and Salas M. (1994) Gene 148, 107–112.
Blanco, L. and Salas, M. (1986) Virology 153, 179–187.
Bernad, A, Zaballos, A, Salas, M. and Blanco, L. (1987) EMBO J. 12, 4219–4225.
Bernad, A., Blanco, L., Lázaro, J.M., Martín, G. and Salas, M. (1989) Cell 59, 219–228.
Soengas, M.S., Esteban, J.A., Lázaro, J.M., Bernad, A., Blasco, M.A Salas, M. and Blanco, L. (1992) EMBO J. 11, 4227–4237.
de Vega, M., Lázaro, J.M., Salas, M. and Blanco, L. (1996) EMBO J. 15, 1182–1192.
de Vega, M., Lázaro, J.M., Salas, M. and Blanco, L. (1998) J. Mol. Biol. 279, 807–822.
de Vega, M., Blanco, L. and Salas, M. (1998) J. Biol. Chem. 273, 28966–28977.
Blanco, L and Salas, M. (1995) in Nucleic Acids and Molecular Biology, vol 9, (F. Eckstein and D.M.J. Lilley, eds.) pp. 328–341, Springer-Verlag, Berlin.
Blanco, L. and Salas, M. (1996) J. Biol. Chem. 271, 8509–8512.
Traniger, V., Lázaro, J.M., Salas, M. and Blanco, L. (1996) EMBO J. 15, 3430–3441.
Abril, A., Salas, M., Andreu, J.M., Hermoso, J.M. and Rivas, G. (1997) Biochemistry 36, 11901–11908.
Blanco, L., Gutiérrez, J., Lázaro, J.M., Bernad, A. and Salas, M. (1986) Nucl. Acids Res. 14, 4923–4937.
Blanco, L., Bernad A. and Salas, M. (1988) J. Virol. 62, 4167–4172.
Prieto, I., Serrano, M., Lázaro, J.M., Salas, M. and Hermoso, J.M. (1988) Proc. Nat. Acad. Sci. U.S.A. 85, 314–318.
Serrano, M., Salas, M. and Hermoso, J.M. (1990) Science 248, 1012–1016.
Serrano, M., Gutiérrez, C., Salas, M. and Hermoso, J.M. (1993) J. Mol. Biol. 230, 248–259.
Serrano, M., Gutiérrez, J., Prieto, I., Hermoso, J.M. and Salas, M. (1989) EMBO J. 8, 1879–1885.
Freire, R., Serrano, M., Salas, M. and Hermoso, J.M. (1996) J. Biol. Chem. 271, 31000–31007.
Martín, G., Lázaro, J.M., Méndez, E. and Salas, M. (1989) Nucl. Acids Res. 17, 3663–3672.
Gutiérrez, C., Martín, G., Sogo, J.M. and Salas, M. (1991) J. Biol. Chem. 266, 2104–2111.
Soengas, M.S., Esteban, J.A., Salas, M. and Gutiérrez, C. (1994) J. Mol. Biol. 239, 213–226.
Soengas, M.S., Gutiérrez, C. and Salas, M. (1995) J. Mol. Biol. 253, 517–529.
Blanco, L., Lázaro, J.M., de Vega, M., Bonnin, A. and Salas, M. (1994) Proc. Nat. Acad. Sci. U.S.A. 91, 12198–12202.
Esteban, J.A., Blanco, L., Villar, L. and Salas, M. (1997) Proc. Nat. Acad. Sci. U.S.A. 94, 2921–2926.
García, J.A., Peñalva, M.A., Blanco, L. and Salas, M. (1984) Proc. Nat. Acad. Sci. U.S.A. 81, 80–84.
Gutiérrez, J., Vinós, J., Prieto, I., Méndez, E., Hermoso, J.M. and Salas, M. (1986) Virology 155, 474–483.
Escarmís, C., Guirao, D. and Salas, M. (1989) Virology 169, 152–160.
Gutiérrez, J., Garmendia, C. and Salas, M. (1988) Nucl. Acids Res. 16, 5895–5914
Méndez, J., Blanco, L., Esteban, J.A., Bernad, A. and Salas, M. (1992) Proc. Nat. Acad. Sci. U.S.A. 89, 9579–9583.
Blanco, L., Bernad, A, Esteban, J.A. and Salas, M. (1992) J. Biol. Chem. 267, 1225–1230.
Méndez, I, Blanco, L. and Salas, M. (1997) EMBO J. 16, 2519–2527.
Saturno, J., Lázaro, J.M., Blanco, L. and Salas, M. (1998) J. Mol. Biol. 283, 633–642.
Illana, B., Blanco, L. and Salas, M. (1996) J. Mol. Biol. 264, 453–464.
Mindich, L. and Bamford, D.H. (1988) in The Bacteriophages (R. Calendar ed.), vol 2 pp. 475–520, Plenum Publishing Corporation, New York, NY.
Bamford, D.H. and Mindich, L. (1984) J. Virol. 50, 309–315.
Shiue, S., Hsieh, J.-C. and Ito, J. (1991) Nucl. Acids Res. 19, 3805–3810.
Hsieh, J., Jung, G. M., Leavitt, C. and Ito, J. (1987) Nucl. Acids Res. 15, 8998–9009.
Jung, G., Leavitt, M.C., Hsieh, J. and Ito, J. (1987) Proc. Nat. Acad. Sci. U.S.A.. 84, 8287–8291.
Savilahti, H. and Bamford, D.H. (1987) Gene 57, 121–130.
Savilahti, H., Caldentey, J., Lundström, K., Syväoja, J.E. and Bamford, D.H. (1991) J. Biol. Chem. 266, 18737–18744.
Zhu, W. and Ito, J. (1994) Biochim. Biophys. Acta. 1219, 267–276.
Caldentey, J., Blanco, L., Savilahti, H, Bamford, D.H. and Salas, M. (1992) Nucl. Acids Res. 20, 3971–3976.
Yoo, S.-K. and Ito, J. (1991) J. Mol. Biol. 218, 779–789.
Caldentey, J., Blanco, L., Bamford, D.H. and Salas, M. (1993) Nucl. Acids Res. 21, 3725–3730.
Pakula, T., Caldentey, J., Serrano, M., Gutiérrez, C., Hermoso, J.M., Salas, M. and Bamford, D.H. (1990) Nucl. Acids Res. 18, 6553–6557.
García, E., Gómez, C., Ronda, C., Escarnís, C. and López, R. (1983) Virology 128, 92–104.
Martín, A.C., López, R. and García, P. (1995) Virology 211, 21–32.
García, P., Hermoso, J.M., García, J.A., García, E., López, R. and Salas, M. (1986) J. Virol. 58, 31–35.
Martín, A.C., Blanco, L., García, P., Salas, M. and Méndez, J. (1996) J. Mol. Biol. 260, 369–377.
Bernheimer, H.P. (1977) Science 195, 66–68.
Romero, A., López, R., Lurz, R. and García, P. (1990) J. Virol. 64, 5149–5155.
Sakaguchi, K. (1990) Microbiol. Rev. 54, 66–74.
Hirochika, H. and Sakaguchi, K. (1982) Plasmid 7, 59–65.
Hirochika, H., Nakamura, K. and Sakaguchi, K. (1984) EMBO J. 3, 761–766.
Keen, C.L., Mendelovitz, S., Cohen, G., Aharonowitz, Y. and Roy, K.L. (1988) Mol. Gen. Genet. 212, 172–176.
Kinashi, H., Shimaji, M. and Sakai, A. (1987) Nature (London) 328, 454–456.
Chen, C.W., Yu, T.-W., Lin, Y.-S., Keiser, H.M. and Hopwood, D.A. (1993) Mol. Microbiol. 7, 925–932.
Kinashi, H. and Shimaji-Murayama, M. (1991) J. Bacteriol. 173, 1523–1529.
Chang, P.-C. and Cohen, S.N. (1994) Science 265, 952–954.
Chang, P.-C., Kim, E.-S. and Cohen, S.N. (1996) Mol. Microbiol. 22, 789–800.
Wu, X. and Roy, K.L. (1993) J. Bacteriol. 175, 37–52.
Chen, C.W. (1996) Trends Genet. 12, 192–196.
Qin, Z. and Cohen, S.N. (1998) Mol. Microbiol. 28, 893–903.
Crespi, M., Messeus, E., Caplan, A.B., van Montagu, M. and Desomer, J. (1992) EMBO J. 11, 795–804.
Zakrzewska-Czerwinska, J. and Schrempf, H. (1992) J. Bacteriol. 147, 2688–2693.
Salas, M. and Rojo, F. (1993) in Bacillus subtilis, the Model Gram-Positive Bacterium: Physiology, Biochemistry and Molecular Genetics, (A.L. Sonenshein, J.A. Hoch and R. Losick, eds.) pp. 843–857, American Society for Microbiology, Washington, DC.
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Salas, M. (1999). Mechanisms of Initiation of Linear DNA Replication in Prokaryotes. In: Setlow, J.K. (eds) Genetic Engineering. Genetic Engineering, vol 21. Springer, Boston, MA. https://doi.org/10.1007/978-1-4615-4707-5_8
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