Skip to main content

Specmat: Spectra as Molecular Descriptors for the Prediction of Biological Activity

  • Chapter
Molecular Modeling and Prediction of Bioactivity

Abstract

A proper choice of molecular descriptors or molecular fingerprints is decisive for successful application of computational methods in QSAR and Lead Discovery.1–3

To whom correspondence should be addressed.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. C. Hansch and A. Leo, Exploring QSAR: Fundamentals and Applications in Chemistry and Biology, American Chemical Society, Washington, DC (1995) Vol 1.

    Google Scholar 

  2. H. Kubinyi. 3D QSAR in Drug Design: Theory, Methods and Applications, ESCOM, Leiden (1993).

    Google Scholar 

  3. H. Kubinyi, G. Folkers, and Y.C. Martin, Eds., 3D QSAR in Drug Design: Recent Advances, ESCOM (Kluwer), Leiden (1997).

    Google Scholar 

  4. Submitted publication.

    Google Scholar 

  5. P. Geladi and B.R. Kowalski, Partial least squares regression: a tutorial, Anal. Chim. Acta, 185:1 (1986).

    Article  CAS  Google Scholar 

  6. S. Wold, E. Johansson, and M. Cocchi, Partial least squares projections to latent structures, in 3D QSAR in Drug Design: Theory, Methods and Applications, H. Kubinyi, Ed., ESCOM, Leiden (1993).

    Google Scholar 

  7. SYBYL, Tripos Inc., 1699 S. Hanley Rd., St. Louis, MO 63144.

    Google Scholar 

  8. R.D. Cramer III, D.E. Patterson, and J.D. Bunce, Comparative Molecular Field Analysis (CoMFA). 1. Effect of shape on binding of steroids to carrier proteins, J. Am. Chem. Soc., 110:5959 (1988).

    Article  CAS  Google Scholar 

  9. GAUSSIAN 94, M.J. Frisch, G.W. Trucks, H.B. Schlegel, P.M.W. Gill, B. G. Johnson, M.A. Robb, J.R.Cheeseman,T.A. keith, G.A. Petersson, J.A. Montgomery, K. Raghavachari, M.A. Al-Laham, V.G. Zakrzewski, J.V. Ortiz, J.B. Foresman, J. Cioslowski, B.B. Stefanov, A. Nanayakkara, M. Challacombe,C.Y. Peng, P.Y. Ayala, W. Chen, M.W. Wong, J.L. Andres, E.S. Repogle, R. Gomperts, R.L. Martin, D. J. Fox, J.S. Binkley,D.J. Defrees, J. Baker, J.P. Stewart, M. Head-Gordon, C. Gonzalez, and J.A. Pople, Gaussian, Inc., Pittsburgh PA (1995).

    Google Scholar 

  10. R.S. McDonald and P.A. Wilks Jr., Appl. Spec., 42:151 (1988).

    Article  CAS  Google Scholar 

  11. K. Esbensen, S. Schonkopf and T. Midtgaard, Multivariate Analysis in Practice,Wennbergs Trykkeri AS, Trondheim (1996).

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2000 Springer Science+Business Media New York

About this chapter

Cite this chapter

Bursi, R., van Geerestein, V.J. (2000). Specmat: Spectra as Molecular Descriptors for the Prediction of Biological Activity. In: Gundertofte, K., Jørgensen, F.S. (eds) Molecular Modeling and Prediction of Bioactivity. Springer, Boston, MA. https://doi.org/10.1007/978-1-4615-4141-7_25

Download citation

  • DOI: https://doi.org/10.1007/978-1-4615-4141-7_25

  • Publisher Name: Springer, Boston, MA

  • Print ISBN: 978-1-4613-6857-1

  • Online ISBN: 978-1-4615-4141-7

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics