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Abstract

Molecular dynamics simulation is widely used in, for example, molecular biology, material engineering, and surface physics to study protein folding, structure defect, and crack propagation. Structures of proteins, working parts of a cell, are believed to determine their functions, the knowledge of which helps understand life and also accelerate drug design. In this chapter, we establish the connection between microscopic motions of atoms and their macroscopic properties. A molecular dynamics example is then provided to simulate release of particles from a compartment (vaporization of a droplet).

Keywords

Molecular Dynamic Macroscopic Property Macroscopic Quantity Ergodic Hypothesis Namics Simulation 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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References

  1. Two textbooks on molecular dynamics are, J.M. Haile, “Molecular Dynamics Simulations: Elementary Methods”, Wiley, New York (1992)Google Scholar
  2. D.C. Rapaport, “The Art of Molecular Dynamics Simulation”, Cambridge University Press, Cambridge, England (1995)Google Scholar
  3. Textbooks on statistical mechanics include, S.-K. Ma, “Statistical Mechanics”, World Scientific, Singapore (1985)zbMATHGoogle Scholar
  4. L.E. Reichl, “A Modern Course in Statistical Physics”, University of Texas Press, Austin (1980)Google Scholar

Copyright information

© Springer Science+Business Media New York 2003

Authors and Affiliations

  • Sun-Chong Wang
    • 1
  1. 1.TRIUMFCanada

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