Abstract
This paper compares the warping of neuro-images using brain deformation predicted by means of patient-specific biomechanical model with the neuro-image registration using BSpline-based free form deformation algorithm. Deformation fields obtained from both algorithms are qualitatively compared and overlaps of edges extracted from the images are examined. Finally, an edge-based Hausdorff distance metric is defined to quantitatively evaluate the accuracy of registration for these two algorithms. From the results it is concluded that the patient-specific biomechanical model ensures higher registration accuracy than the BSpline registration algorithm.
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References
Warfield, S.K., Haker, S.J., Talos, I.F. et al.: Capturing intraoperative deformations: research experience at Brigham and Women’s hospital. Med. Image Anal. 9, 145–162 (2005)
Wittek, A., Miller, K., Kikinis, R. et al.: Patient specific model of brain deformation: Application to medical image registration. J. Biomech. 40, 919–929 (2007)
Holden, M.: A review of geometric transformations for nonrigid body registration. IEEE Trans. Med. Imag. 27, 111–128 (2008)
Rueckert, D., Sonoda, L.I., Hayes, C. et al.: Nonrigid registration using free-form deformations: Application to breast MR images. IEEE Trans. Med. Imag. 18, 712–721 (1999)
Schnabel, J.A., Tanner, C., Castellano-Smith, A.D.: Validation of nonrigid image registration using finite-element methods: application to breast MR images. IEEE Trans. Med. Imag. 22, 238–247 (2003)
Wittek, A., Joldes, G., Couton, M. et al.: Patient-specific non-linear finite element modelling for predicting soft organ deformation in real-time; Application to non-rigid neuroimage registration. Progr. Biophys. Mol. Biol. 103 292–303 (2010)
Miller, K., Wittek, A., Joldes, G. et al.: Modelling brain deformations for computer-integrated neurosurgery. Int. J. Numer. Meth. Biomed. Eng. 26 117–138 (2010)
Paulsen, K.D., Miga, M.I., Kennedy, F.E. et al.: A computational model for tracking subsurface tissue deformation during stereotactic neurosurgery. IEEE Trans. Biomed. Eng. 46, 213–225 (1999)
Miga, M.I.: Development and quantification of a 3D brain deformation model for model-updated image-guided stereotactic neurosurgery. PhD. thesis, Dartmouth College, Thayer School of Engineering, Hanover (1998)
Miga, M.I., Paulsen, K.D., Hoopes, P.J. et al.: In vivo modeling of interstitial pressure in the brain under surgical load using finite elements. ASME J. Biomech. 122, 354–363 (2000)
Grosland, N.M., Shivanna, K.H., Magnotta, V.A. et al.: IA-FEMesh: an open-source, interactive, multiblock approach to anatomic finite element model development. Comput. Meth. Programs Biomed. (2009)
Wittek, A., Hawkins, T., Miller, K.: On the unimportance of constitutive models in computing brain deformation for image-guided surgery. Biomech. Model. Mechanobiology 8, 77–84 (2009)
Joldes, G.R., Wittek, A., Miller, K.: Cortical surface motion estimation for brain shift prediction. In: Computational Biomechanics for Medicine IV Workshop (MICCAI 2009). London, UK, p. 50–59 (2009)
Joldes, G., Wittek, A., Miller, K. et al.: Realistic and efficient brain-skull interaction model for brain shift computation. In: Computational Biomechanics for Medicine III (MICCAI 2008 Associated Workshop), p. 95–105 (2008)
Joldes, G., Wittek, A., Couton, M. et al.: Real-time prediction of brain shift using nonlinear finite element algorithms. Medical Image Computing and Computer Assisted Intervention (MICCAI 2009), London, LNCS 5762, p. 300–307 Springer, Berlin (2009)
Miller, K., Chinzei, K.: Mechanical properties of brain tissue in tension. J. Biomech. 35, 483–490 (2002)
Miller, K., Joldes, G.R., Lance, D. et al.: Total Lagrangian explicit dynamics finite element algorithm for computing soft tissue deformation. Communications. In Numerical Methods in Engineering vol. 23, 121–134 (2007)
Joldes, G., Wittek, A., Miller, K.: Computation of intra-operative brain shift using dynamic relaxation. Comput. Meth. Appl. Mech. Eng. 198, 3313–3320 (2009)
Joldes, G.R., Wittek, A., Miller, K.: Suite of finite element algorithms for accurate computation of soft tissue deformation for surgical simulation. Med. Image Anal. 13, 912–919 (2009)
Barber, C.B., Dobkin, D.P., Huhdanpaa, H.T.: The quickhull algorithm for convex hulls. ACM Trans. Math. Softw. 22, 469–483 (1996)
Gonzalez, R.C.: Woods RE, Eddins SL Digital Image Processing using Matlab. Gatesmark Publishing (2009)
Schoenberg, I.J.: Contributions to the problem of approximation of equidistant data by analytic functions. Q. Appl. Math. 4, 45–99 (1946)
Lee, S., Wolberg, G., Shin, S.Y.: Sacttered data interpolation with multilevel B-Splines. IEEE Trans. Visual. Comput. Graph. 3, 228–244 (1997)
Wells, W.M., Viola, P., Kikinis, R.: Multi-modal volume registration by maximization of mutual information. Medical Robotics and Computer Assisted Surgery, p. 55–62 (1995)
Mattes, D., Haynor, D.R., Vesselle, H. et al.: Nonrigid multimodality image registration. In: Proceedings of SPIE 4322, 1609 (2001)
Fedorov, A., Billet, E., Prastawa, M. et al.: Evaluation of Brain MRI alignment with the Robust Hausdorff distance measures. In: The 4th International Symposium on Visual Computing 2008, LNCS, p. 594–603 (2008)
Canny, J.: A computational approach to edge detection. IEEE Trans. Pattern Anal. Mach. Intell. 8, 679–698 (1986)
Garlapati, R.R., Joldes, G.R., Wittek, A., et al.: Objective evaluation of accuracy of intra-operative neuroimage registration. In: Computational Biomechanics for Medicine VII (MICCAI Associated Workshop) (accepted) (2012)
Ji, S., Fan, X., Roberts, D.W. et al.: Cortical surface strain estimation using stereovision. In: Medical Image Computing and Computer Assisted Intervention (MICCAI 2011), Toronto. LNCS 6891, p. 412–419 Springer, Berlin (2011)
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Mostayed, A. et al. (2013). Intra-operative Update of Neuro-images: Comparison of Performance of Image Warping Using Patient-Specific Biomechanical Model and BSpline Image Registration. In: Wittek, A., Miller, K., Nielsen, P. (eds) Computational Biomechanics for Medicine. Springer, New York, NY. https://doi.org/10.1007/978-1-4614-6351-1_12
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DOI: https://doi.org/10.1007/978-1-4614-6351-1_12
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