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Molecular Techniques Applied to Polyploids

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Polyploidy

Part of the book series: Basic Life Sciences ((BLSC,volume 13))

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Abstract

We have learned a great deal about the patterns of evolution through examination of species differences at the phenotypic level: isozyme patterns, secondary metabolic products, morphological changes, karyotype, or other criteria. Such studies are inherently limited to studying those changes visible to us; many changes in the genome of a particular species may not result in visible phenotypic change. In the last 10 years many innovations in examining the average composition of genomes by reassociation analysis, thermal denaturation of interspecific hybrid DNA molecules, and other procedures have provided a means for examining the total divergence between related genomes. Such procedures can be used to chart the general trends of species-specific changes in genome composition over time, including both individual base changes and phenomena such as loss or amplification of sequences. DNA reassociation procedures necessarily give information on typical patterns, but new methods developed over the last five years can yield information on the evolution of specific gene sequences. These new methods include restriction enzyme digestion patterns and DNA sequencing; in order to accomplish these analyses it is usually necessary to clone a specific sequence of eukaryotic DNA in a phage or plasmid vector.

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References

  1. Wilson, A.C., Carlson, S.S., White, T.J., 1977, Biochemical evolution. Ann. Rev. Biochem. 46: 573–639.

    Article  PubMed  CAS  Google Scholar 

  2. Britten, R.J., Graham, D.E., Neufeld, B.R., 1974, An analysis of repeating DNA sequences by reassociation, pp. 363–418, Grossman, L., Moldave, K. (eds.), in “Methods In Enzymology,” Vol. 29E, Academic Press, New York.

    Google Scholar 

  3. Walbot, v.. Dure, L.S., III, 1976, Developmental Biochemistry of cotton seed embryogenesis and germination. VII. Characterization of the cotton genome. J. Mol. Biol. 101: 503–536.

    CAS  Google Scholar 

  4. Flavell, R.B., Smith, D.B., 1976, Nucleotide sequence organization in the wheat genome. Heredity 37: 231–252.

    Article  Google Scholar 

  5. Zimmerman, J.L., Goldberg, R.B., 1977, DNA sequence organization in the genome of Nicotiana tabacum. Chromosoma 59: 227–252.

    Article  CAS  Google Scholar 

  6. Goldberg, R.B., 1978, DNA sequence organization in the soybean plant. Biochem. Genet. 16: 45–68.

    Article  PubMed  CAS  Google Scholar 

  7. Walbot, v., Goldberg, R., Plant genome organization and its relationship to classical plant genetics, Hall, T., Davies J. (eds.), “Nucleic Acids in Plants,” CRC Press, West Palm Beach, Florida (in press).

    Google Scholar 

  8. Davidson, E.H., Britten, R.J., 1973, Organization, trans-cription, and regulation in the animal genome. Quart. Rev. Biol. 48: 555–613.

    Google Scholar 

  9. Lewin, B.L., 1975, “Gene Expression - 2,” Wiley, New York.

    Google Scholar 

  10. Thompson, W.F., 1978, Prespectives on the evolution of plant DNA. Carnegie Inst. Ann. Rep. Plant Biology 1977–1978, pp. 310–316.

    Google Scholar 

  11. Jackson, A.O., Larkins, B., 1976, Influence of ionic strength, pH, and chelation of divalent metals on isolation of poly-ribosomes from tobacco leaves. PI. Physiol. 57: 5–10.

    Article  CAS  Google Scholar 

  12. Beachy, R.N., Thompson, J.E., Madison, J.T., 1978, Isolation of polyribosomes and messenger RNA active in in vitro syn-thesis of soybean seed proteins. PI. Physiol. 61: 139–144.

    Article  CAS  Google Scholar 

  13. Roberts, B.E., Paterson, B.M., 1973, Efficient translation of tobacco mosaic virus RNA and rabbit globin as RNA in a cell-free system from commercial wheat germ. Proc. Nat. Acad. Sci. USA 70: 2330–2334.

    Article  PubMed  CAS  Google Scholar 

  14. Marcu, K., Dudock, B., 1974, Characterization of a highly efficient protein synthesizing system derived from commercial wheat germ. Nucleic Acids Res. 1: 1385–1397.

    Article  PubMed  CAS  Google Scholar 

  15. Langridge, J., Langridge, P., Bergquist, P.L., 1979, Extraction of nucleic acids from agarose gels. Analyt. Biochem. (in press).

    Google Scholar 

  16. Palacios, R., Palmiter, R., Schimke, R.T., 1972, Identification and isolation ovalbiemin-synthesizing polysomes I. Specific binding of I-anti-ovalbumin to polysomes. J. Biol. Chem. 247: 2316–2321.

    PubMed  CAS  Google Scholar 

  17. Tunis, M.A., Miller, D.L., 1977, Quantitation of rat a- fetoprotein messenger RNA with a complementary DNA probe. J. Biol. Chem. 252: 8469–8475.

    Google Scholar 

  18. Efstratiadis, A., Kafatos, F.C., Maxam, A.M., Maniates, T., 1976, Enzymatic in vitro synthesis of globin genes. Cell 7: 279–288.

    Article  PubMed  CAS  Google Scholar 

  19. Myers, J.C., Spiegelman, S., 1978, Sodium pyrophosphate inhibition of RNA-DNA hybrid degradation by reverse trans-criptase. Proc. Nat. Acad. Sci. USA 75: 5329–5333.

    Article  PubMed  CAS  Google Scholar 

  20. Scott, W.A., Werner, R., 1977, “Molecular Cloning of Recombinant DNA,” Academic Press, New York.

    Google Scholar 

  21. Paterson, B.M., Roberts, B.E., Kuff, E.L., 1977, Structural gene idenfitication and mapping by DNA’mRNA hybrid-arrested cell-free translation. Proc. Nat. Acad. Sci. USA 74: 4370–4374.

    Google Scholar 

  22. Smith, D.F., Searle, P.E., Williams, J.G., 1979, Characterization of bacterial clones containing DNA sequences derived from Xenopus laevis vitellogenin mRNA. Nucleic Acids Res. 6: 487–506.

    Article  PubMed  CAS  Google Scholar 

  23. Zain, B.S., Roberts, R.J., 1979, Sequences from the beginning of the fiber messenger RNA of adenovirus-2. J. Mol. Biol. 131: 341–352.

    Article  PubMed  CAS  Google Scholar 

  24. Smith, H., 1979, Nucleotide sequence specificity of restriction endonucleases. Life Science 205: 455–462.

    CAS  Google Scholar 

  25. Helling, R.B., Goodman, H.M., Boyer, H.W., 1974, Analysis of endonuclease R-EcoRl fragments of DNA from lambdoid bacteri-ophages and other viruses by agarosegel electrophoresis. J. Virol. 14: 1235–1244.

    Google Scholar 

  26. Roberts, R.J., 1978, Restriction and modification enzymes and their recognition sequences. Gene 4: 183–193.

    Article  PubMed  CAS  Google Scholar 

  27. Southern, E.M., 1975, Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98: 503–517.

    Article  PubMed  CAS  Google Scholar 

  28. Botchan, M., Topp, W., Sambrook, J., 1976, The arrangement of simian virus 40 sequences in the DNA of transformed cells. Cell 9: 269–287.

    Article  PubMed  CAS  Google Scholar 

  29. Arnheim, N., Southern, E.M., 1977, Heterogeneity of the ribosomal genes in mice and man. Cell 11: 363–370.

    Article  PubMed  CAS  Google Scholar 

  30. Jeffreys, A.J., 1979, “DNA sequence variants in the T” 6- and 3-globin genes of man. Cell 18: 1–10.

    Google Scholar 

  31. Maxam, A.M., Gilbert, W., 1977, A new method for sequencing DNA. Proc. Nat. Acad. Sci. USA 74: 560–564.

    Article  PubMed  CAS  Google Scholar 

  32. Sanger, F., Nicklen, S., Coulson, A.R., 1977, DNA sequencing with chain terminating inhibitors. Proc. Nat. Acad. Sci. USA 74: 5463–5467.

    Article  PubMed  CAS  Google Scholar 

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© 1980 Plenum Press, New York

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Walbot, V., Beachy, R.N., Yao, MC. (1980). Molecular Techniques Applied to Polyploids. In: Lewis, W.H. (eds) Polyploidy. Basic Life Sciences, vol 13. Springer, Boston, MA. https://doi.org/10.1007/978-1-4613-3069-1_28

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  • DOI: https://doi.org/10.1007/978-1-4613-3069-1_28

  • Publisher Name: Springer, Boston, MA

  • Print ISBN: 978-1-4613-3071-4

  • Online ISBN: 978-1-4613-3069-1

  • eBook Packages: Springer Book Archive

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