Skip to main content

New Shapes For Catalysis and Molecular Recognition

  • Chapter
Inclusion Phenomena and Molecular Recognition

Abstract

Any discussion of molecular recognition should begin by acknowledging the debt that it owes to macrocyclic chemistry. These molecules have been the workhorses of bioorganic chemistry and have influenced literally and figuratively the shape of things in molecular recognition. Cyclodextrins, for example, have been useful for showing how small molecules can imitate the essential steps of enzyme catalyzed reactions using acyl transfers as a probe [1]. Crown ethers have been successful at revealing aspects of binding and transport of metal ions; at the molecular level, complexation of ammonium species has been used as a vehicle for several bioorganic processes [2]. Allosteric effects, especially that of cooperativity were first demonstrated with crown ether derivatives [3]. More recently, interest in cyclophane derivatives has grown. Their ease of synthesis and their ability to complex aromatic molecules in aqueous media can be used to sort out the intrinsics of hydrophobic and aromatic stacking interactions. Some of the rules for predicting complexation especially those involving optimal rigidity and collapsibility have emerged from examination of cyclophane-derived systems.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

eBook
USD 16.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Trainor, G.; Breslow R. J., Am. Chem. Soc. 1981, 103, 154; D’Souza, V. T.; Bender, M. L. Acc. Chem. Res. 1987, 20, 146.

    Article  CAS  Google Scholar 

  2. Lehn, J.-M. Science 1985,227, 846; Cram, D. J. ibid. 1983,279, 1177; Lehn, J.-M.; Sirlin, C. J. Chem. Soc., Chem. Commun. 1978, 949; Cram, D. J.; Lam, P. Y.-S.; Ho, S. P. J. Am. Chem. Soc. 1986,108, 839.

    Article  Google Scholar 

  3. Rebek, J. Jr.; Costello, T.; Marshall, L.; Wattley, R.; Gadwood, R. C.; Onan, K. J. Am. Chem. Soc. 1985, 107, 7481.

    Article  CAS  Google Scholar 

  4. Stetter, H.; Roos, E. E. Chem. Ber. 1955,88, 1390, 1395; Odashima, K.; Itai, A.; Iitaka, Y.; Koga, K. Am. Chem. Soc. 1980,102, 2504; Miller, S. P.; Whitlock, H. W. Jr. ibid 1984, 106, 1492.; Winkler, J.; Coutouli-Argyropoulou, E.; Leppkes, R.; Breslow, R. ibid 1983,105, 7198; Diederich, F.; Griebel, D. ibid 1984,106, 8037; Gutsche, C. D. Acc. Chem. Res. 1983,16, 161.

    Article  CAS  Google Scholar 

  5. Gandour, R. Biorg. Chem. 1981,10, 169.

    Article  CAS  Google Scholar 

  6. Kemp, D. S.; Petrakis, K. S. J. Org. Chem. 1981, 46, 5140.

    Article  CAS  Google Scholar 

  7. Rebek, J. Jr.; Askew, B.; Killoran, M.; Nemeth, D.; Lin, F.-T. J. Am. Chem. Soc. 1987, 109, 2426.

    Article  CAS  Google Scholar 

  8. Rebek, J. Jr. Science 1987, 235, 1478; Rebek, J. Jr.; Marshall, L.; Wolak, R.; Parris, K.; Killoran, M.; Askew, B.; Nemeth, D.; Islam, N. J. Am. Chem. Soc. 1985, 107, 7476. For other clefts in molecular recognition see: Wilcox, C. S.; Greer, L. M.; Lynch, V. J. Am. Chem. Soc. 1987, 109, 1865; Kelly, T. R.; Maguire, M. P. ibid, 1987, 109, 6549.

    Article  CAS  Google Scholar 

  9. Rebek, J. Jr.; Duff, R. J.; Gordon, W. E.; Parris, K. J. Am. Chem. Soc. 1986, 108, 6068.

    Article  CAS  Google Scholar 

  10. Rebek, J. Jr.; Askew, B.; Islam, N.; Killoran, M.; Nemeth, D.; Wolak, R. J. Am. Chem. Soc. 1985, 107, 6736.

    Article  CAS  Google Scholar 

  11. Rebek, J. Jr.; Nemeth, D. J. Am. Chem. Soc. 1986,108, 5637.

    Article  CAS  Google Scholar 

  12. Rebek, J. Jr.; Nemeth, D.; Ballester, P.; Lin, F.-T. J. Am. Chem. Soc. 1987, 109, 3474.

    Article  CAS  Google Scholar 

  13. Rebek, J. Jr.; Askew, B.; Nemeth, D.; Parris, K. J. Am. Chem. Soc. 1987, 109, 2432.

    Article  CAS  Google Scholar 

  14. Lindsey, J. S.; Schreiman, I. C.; Hsu, H. C.; Kearney, P. C.; Marguerattaz, A. M. J. Org. Chem. 1987,52, 827.

    Article  CAS  Google Scholar 

  15. Lindsey, J. S.; Kearney, P. C.; Duff, R. J.; Tjivikua, P. T.; Rebek, J. Jr. J. Am. Chem. Soc. 1988,110, 6575.

    Article  CAS  Google Scholar 

  16. Rebek, J. Jr.; Askew B.; Ballester, P.; Buhr, C.; Jones, S.; Nemeth, D.; Williams, K. J. Am. Chem. Soc. 1987,109, 5033. For another system using macrocyclic structures for nucleic acid recognition see: Hamilton, A. D.; Van Engen, D. J. Am. Chem. Soc. 1987, 109, 5035.

    Article  CAS  Google Scholar 

  17. Kyogoku, Y.; Lord, R. C.; Rieh, A. Science 1966,154, 518.

    CAS  Google Scholar 

  18. Rebek, J. Jr.; Askew, B.; Ballester, P.; Buhr, C.; Costero, A.; Jones, S.; Williams, K. J. Am. Chem. Soc. 1987,109, 6866.

    Article  CAS  Google Scholar 

  19. Rebek, J. Jr.; Williams, K.; Parris, K; Ballester, P.; Jeong, K. -S. Angew. Chem., Int. Ed. Engl. 1987,26, 1244.

    Article  Google Scholar 

  20. Jeong, K.-S.; Rebek, J. Jr. Am. Chem. Soc. 1988, 110, 3327.

    Article  CAS  Google Scholar 

  21. Benzing, T.; Tjivikua, T.; Wolfe, J.; Rebek, J. Jr. Science 1988, 242, 266.

    Article  CAS  Google Scholar 

  22. Rebek, J. Jr. Pure Appi. Chem. 1989, 67, 1517.

    Article  Google Scholar 

  23. von Kiedrowski, G. Angew. Chem., Int. Ed. Engl. 1986, 25, 932.

    Article  Google Scholar 

  24. Marshall, L.; Parris, K.; Rebek, J. Jr.; Luis, S. V.; Burguete, M. I. J. Am. Chem. Soc. 1988, 110, 5192.

    Article  CAS  Google Scholar 

  25. Swain, C. G.; Brown, J. F. Jr. J. Am. Chem. Soc. 1952, 74, 2538.

    Article  CAS  Google Scholar 

  26. Huff, J.; Askew, B.; Duff, R. J.; Rebek, J. Jr. J. Am. Chem. Soc. 1988, 110, 5908.

    Article  CAS  Google Scholar 

  27. Tadayoni, B. M.; Parris, K.; Rebek, J. Jr. J. Am. Chem. Soc. 1988,110, 4503.

    Article  Google Scholar 

  28. Wolfe, J.; Nemeth, D.; Costero, A.; Rebek, J. Jr. J. Am. Chem. Soc. 1988,110, 983.

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 1990 Plenum Press, New York

About this chapter

Cite this chapter

Rebek, J. (1990). New Shapes For Catalysis and Molecular Recognition. In: Atwood, J.L. (eds) Inclusion Phenomena and Molecular Recognition. Springer, Boston, MA. https://doi.org/10.1007/978-1-4613-0603-0_1

Download citation

  • DOI: https://doi.org/10.1007/978-1-4613-0603-0_1

  • Publisher Name: Springer, Boston, MA

  • Print ISBN: 978-1-4612-7887-0

  • Online ISBN: 978-1-4613-0603-0

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics