Abstract
Genes in which a transposable element has inserted can be cloned using hybridization probes specific for the adjacent transposable element. Three families of transposable elements, Ac/Ds, Spm(En), and Mu, have been used successfully to clone maize genes. Below I briefly summarize the strategies that have been utilized once an insertion mutation has been isolated and genetically characterized. See the appropriate section in Section III, Genetics Protocols, for a brief review of these transposable elements, to learn how to isolate mutations using the different element systems, and to confirm that the mutation is in fact the result of the desired element.
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References
Bennetzen JL (1987) Covalent DNA modification and the regulation of Mutator element transposition in maize. Mol Gen Genet 208: 45–51
Brown WE, Robertson DS, Bennetzen JL (1989) Molecular analysis of multiple Mutator-de-rived alleles of the Bronze locus of maize. Genetics 122: 439–445
Buckner B, Kelson TL, Robertson DS (1990) Cloning of the y1 locus of maize, a gene involved in the biosynthesis of carotenoids. Plant Cell 2: 867–876
Chandler VL, Walbot V (1986) DNA modification of a maize transposable element correlates with loss of activity. Proc Natl Acad Sci USA 83: 1767–1771
Chandler VL, Hardeman KJ (1992) The Mu elements of Zea mays. In Scandalios J (ed) Advances in Genetics 30: 77–122, Academic Press, New York
Chomet PS, Wessler S, Dellaporta S (1987) Inactivation of the maize transposable element Activator (Ac) is associated with its DNA modification. EMBO J 6: 295–302
Chomet P, Lisch D, Hardeman KJ, Chandler VL, Freeling M (1991) Identification of a regulatory transposon that controls the Mutator transposable element system in maize. Genetics 129: 261–270
Cone KC, Burr FA, Burr B (1986) Molecular analysis of the maize anthocyanin regulatory locus C1. Proc Natl Acad Sci USA 83: 9631–9635
Cone KC, Schmidt RJ, Burr B, Burr FA (1988) Advantages and limitations of using Spm as a transposon tag. In Nelson OE (ed) Plant Transposable Elements, Plenum Press, New York, pp 149–160
Dellaporta SL, Greenblatt I, Kermicle J, Hicks JB, Wessler SR (1988) Molecular cloning of the maize R-nj allele by transposon-tagging with Ac. In Gustafson JP, Appels R (eds) Chromosome Structure and Function: Impact of New Concepts, 18th Stadler Genetics Symposium, Plenum Press, New York, pp 263–282
Fedoroff N, Wessler S, Shure M (1983) Isolation of the transposable maize controlling elements Ac and Ds. Cell 35: 235–242
Fedoroff NV, Furtek DB, Nelson OE (1984) Cloning of the bronze locus in maize by a simple and generalizable procedure using the transposable element Activator (Ac). Proc Natl Acad Sci USA 81: 3825–3829
Hake S, Vollbrecht E, Freeling M (1989) Cloning Knotted, the dominant morphological mutant in maize using Ds2 as a transposon tag. EMBO J 8: 15–22
Han, C.-D., Coe, EH Jr, and Martienssen RA (1992) Molecular cloning and characterization of iojap (ij), a pattern striping gene of maize. EMBO J. 11: 4037–4046
Hardeman KJ, Chandler VL (1989) Characterization of bz1 mutants isolated from Mutator stocks with high and low numbers of Mu1 elements. Dev Genetics 10: 460–472
Martienssen RA, Barkan A, Freeling M, Taylor WC (1989) Molecular cloning of a maize gene involved in photosynthetic membrane organization that is regulated by Robertson’s Mutator. EMBO J 8: 1633–1639
Martienssen RA, Barkan A, Taylor WC, Freeling M (1990) Somatically heritable switches in the DNA modification of Mu transposable elements monitored with a suppressible mutant in maize. Genes Dev 4: 331–343
McCarty DR, Carson CB, Stinard PS, Robertson DS (1989) Molecular analysis of viviparous1: an abscisic acid-insensitive mutant of maize. Plant Cell 1: 523–532
McLaughlin M, Walbot V (1987) Cloning of a mutable bz2 allele of maize by transposon tagging and differential hybridization. Genetics 117: 771–776
Menssen A, Hohmann S, Martin W, Schnable PS, Peterson PA, Saedler H, Gierl A (1990) The En/Spm transposable element of Zea mays contains splice sites at the termini generating a novel intron from a dSpm element in the A2 gene. EMBO J 9: 3051–3057
Nash J, Luehrsen KR, Walbot V (1990) Bronze-2 gene of maize: reconstruction of a wild-type allele and analysis of transcription and splicing. Plant Cell 2: 1039–1049
O’Reilly C, Shepherd NS, Pereira A, Schwarz-Sommer Z, Bertran I, Robertson DS, Peterson PA, Saedler H (1985) Molecular cloning of the a1 locus of Zea mays using the transposable elements En and Mu1. EMBO J 4: 877–882
Paz-Ares J, Ghosal D, Wienand U, Peterson PA, Saedler H (1986) Molecular cloning of the c locus of Zea mays: a locus regulating the anthocyanin pathway. EMBO J 5: 829–833
Schmidt RJ, Burr FA, Burr B (1987) Transposon tagging and molecular analysis of the maize regulatory locus opaque2. Science 238: 960–963
Schwartz D, Dennis E (1986) Transposase activity of the Ac controlling element in maize is regulated by its degree of methylation. Mol Gen Genet 205: 476–482
Taylor LP, Chandler VL, Walbot V (1986) Insertion of 1.4 kb and 1.7 kb Mu elements into the bronzei gene of Zea mays L. Maydica XXXI: 31–45
Theres N, Scheele T, Starlinger P (1987) Cloning of the Bz2 locus of Zea mays using the transposable element Ds as a gene tag. Mol Gen Genet 209: 193–197
Wienand U, Weydemann U, Niesbach-Klosgen U, Peterson PA, Saedler H (1986) Molecular cloning of the c2 locus of Zea mays, the gene coding for chalcone synthase. Mol Gen Genet 203: 202–207
Viet B, Vollbrecht E, Mathern J, Hake S (1990) A tandem duplication causes the Kn1–0 allele of Knotted, a dominant morphological mutant of maize. Genetics 125: 623–631
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© 1994 Springer-Verlag New York, Inc.
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Chandler, V. (1994). Overview of Cloning Genes Using Transposon Tagging. In: Freeling, M., Walbot, V. (eds) The Maize Handbook. Springer Lab Manuals. Springer, New York, NY. https://doi.org/10.1007/978-1-4612-2694-9_118
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DOI: https://doi.org/10.1007/978-1-4612-2694-9_118
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