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The Secondary Structure

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Book cover The Physics of Proteins

Part of the book series: Biological and Medical Physics, Biomedical Engineering ((BIOMEDICAL))

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Abstract

In principle we could expect that X-ray diffraction provides a complete picture of any protein that can be crystallized, with the exact position of each atom. Indeed, models displayed in showcases give the impression that the protein structure is fully known and has been found ab initio. In reality, however, stereochemical information is used in the elucidation of the structure of a protein. The knowledge of the structure of the building elements is consequently essential. Moreover, X-rays do not “see” hydrogen atoms well; the charge density of these is often determined by using the well-known structure of the amino acids. We give here a brief discussion of the secondary structure; a beautiful and clear treatment is given by Dickerson and Geis [1].

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References

  1. R. E. Dickerson and I. Geis. The Structure and Action of Proteins. Benjamin/Cummings, Menlo Park, CA, 1969.

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  2. L. Pauling, R. B. Corey, and H. R. Branson. The structure of proteins: Two hydrogen-bonded helical configurations of the polypeptide chain. Proc. Natl. Acad. Sci. USA, 37:205–11, 1951.

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  3. L. Pauling and R. B. Corey. Atomic coordinates and structure factors for two helical configurations of polypeptide chains. Proc. Natl. Acad. Sci. USA, 37:235–85, 1951.

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  4. L. Pauling. The Nature of the Chemical Bond, 3rd edition. Cornell Univ. Press, Ithaca, NY, 1960, p. 498.

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  5. C. Ramakrishnan and G. N. Ramachandran. Stereochemical criteria for polypeptide and protein chain conformations. II. Allowed conformations for a pair of peptide units. Biophys. J., 5:909–33, 1965.

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  6. G. N. Ramachandran and V. Sasisekharan. Conformation of polypeptides and proteins. Adv. Protein Chem., 23:283–438, 1968.

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  7. G. E. Schulz. A critical evaluation of methods for prediction of protein secondary structures. Ann. Rev. Biophys. Biophys. Chem., 17:1–21, 1988.

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  8. G. A. Petsko and D. Ringe. Protein Structure and Function. New Science Press, London, 2004.

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Frauenfelder, H. (2010). The Secondary Structure. In: Chan, S., Chan, W. (eds) The Physics of Proteins. Biological and Medical Physics, Biomedical Engineering. Springer, New York, NY. https://doi.org/10.1007/978-1-4419-1044-8_8

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