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Research in e-Science and Open Access to Data and Information

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Abstract

This contribution examines various aspects of “openness” in research and seeks to gauge the degree to which contemporary “e-science” practices are congruent with “open science.” Norms and practices of openness are held to have been vital for the work of modern scientific communities. But concerns have arisen recently about the growth of strong technical and institutional restraints on access to research tools, data and information, in part because of the adverse implications these may have for the effective utilization of advanced digital infrastructures and information technologies in research collaborations. Our discussion first clarifies the conceptual differences between e-science and open science, and it then reports findings recent exploratory research on institutional policies and local practices affecting information access in U.K. e-science projects. In both of its parts the discussion underscores the point that it is unwarranted to presume that encouraging the development of e-science by providing enhanced technical infrastructures and tools alone will necessarily promotes global open science collaboration.

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Notes

  1. 1.

    The nmenonic Cudos was introduced by Merton’s 1942 essay on the normative structure of science, but the association of the “O” with originality was a subsequent modification that has become conventional (see Ziman, 1994).

  2. 2.

    See, e.g., Popper (1959, 1963), Quine (1962), Kuhn (1962/1970), Lakatos (1970).

  3. 3.

    For a sketch of the classical philosophy of science as a domain of concerns completely disjoint from the sociology and history of science, which is deliberately overdrawn for effect, see David (1998b). A more nuanced, but nonetheless compact account is provided by Fuller (1994).

  4. 4.

    Papers following Dasgupta and David (1987, 1994) in this genre include David, Mowery, and Steinmueller (1992), Trajtenberg, Henderson, and Jaffe (1992), Arora and Gambardella (1994, 1997); David (1994, 1996); Gambardella (1994), David and Foray (1995), Arora, David, and Gambardella (1998), Geuna (1999). Some of the foregoing are noticed in the wider survey of the economics of science by Stephan (1996).

  5. 5.

    See, particularly, Merton (1942, 1968) among the writings assembled in Merton (1973); see also, among the many works of Merton’s students, Crane (1965, 1972), Cole and Cole (1967), Cole and Cole (1973), Cole (1978), Zuckerman and Merton (1971).

  6. 6.

    In consequence, only occasionally, and rather tenuously, did their studies attempt to draw links between the ways in which communities of scientists were organized and rewarded, and the ways in which scientific statements were created and accepted within those communities. This is a gloss on a very extensive literature, for fuller discussion of which see Ben-David (1991), Callon (1995), and Leydesdorff (1995).

  7. 7.

    See Barnes (1974, 1977), Bloor (1976), Mulkay (1979), Latour & Woolgar (1979), Knorr-Cetina (1981).

  8. 8.

    See Bacharach, Gambetta et al. (1994) for an exceptional departure from this tradition in economics.

  9. 9.

    See, in addition to works cited above (fn. 4), e.g., David (1996, 1998a, 2003, 2004), Turner and Mairesse (2002), Carayol (2003), Carayol and Dalle (2003), Carayol and Matt (2004, 2006).

  10. 10.

    See, e.g., Brock and Durlauf (1999), David (1998b, 2002). Apart from the policy-relevant considerations noted in the following text, it may be argued that the cumulative, incremental development of propositions on which quasi-stable consensuses are formed among scientists do constitute grounds for insisting on the validity of drawing a cognitive distinction between the scientific and the other cultural pursuits. Because such resistance to “relativism” remains strongly contested in some quarters of contemporary “science studies,” David develops an argument defending it on “evolutionary epistemological” grounds. For a defense of “objectivism” and criticism of “social constructivism” in science studies, see Schroeder (2007a).

  11. 11.

    See Kitcher (1993, Ch. 8). This article, on “The Organization of Cognitive Labor,” opens by asking whether, in an “epistemically well-designed social system,” it is possible that “the individual ways of responding to nature matter far less than the coordination, cooperation, and competition that go on among the individuals?” (p. 303)

  12. 12.

    See Blau (1973), Beaver and Rosen (1979), Katz (1994) for studies of scientific collaboration in the sociological and bibliometric tradition using co-publications. While economists have followed Jaffe, Trajtenberg, and Henderson (1993) who used patent co-citations, and cross-citations between scientific publications and patents to try to gauge the extent of knowledge flows and inferred collaboration between academic and university scientists, Mairesse and Turner (2006) recently have broken new ground in measuring and econometrically explaining variations in the intensity of co-publication among the members of the large community of physicists in the condensed matter section of the CNRS.

  13. 13.

    The statistically significant positive factors include both characteristics of the individual researchers (e.g., age, professional status, publication history) and their structural or institutional situations (e.g., department or laboratory size and disciplinary specialization, institutional reputation, ease of face-to-face interactions gauged by spatial proximity to other laboratories with specialization in the same or complementary research field).

  14. 14.

    See Fry, Schroeder, and den Besten (2009), Schroeder (2008), and den Besten, David, and Schroeder (2009) for further discussions of the distinction between generic research technologies and narrowly defined research tools and its bearing on the potential for openness in e-science.

  15. 15.

    For a report on the structured interviews, see Fry et al. (2008). David, den Besten, and Schroeder (2006) present a preliminary version of the framework of questions from which were developed both the structured interview protocol and subsequent online survey questionnaire, the result of which is reported by den Besten and David (2008). The complete set of survey questions may be consulted in den Besten et al. (2009) and is also available online as the Oxford eScience Information Access Survey at http://www.oii.ox.ac.uk/microsites/oess/oesias; see Q. 8 for questions directly inspired by the Stanford checklist.

  16. 16.

    See David (2005); Dalle, David, Ghosh, and Steinmueller (2005); David and Uhlir (2005, 2006); Uhlir and Schröder (2007); Schroeder (2007b).

  17. 17.

    See David and Spence (2003, 2008) for descriptions of the pilot projects and discussion of their relationship to the US “collaboratories” projects of the 1990s, and the more recent NSF “Cyberinfrastructure” Program. The discussion in this section draws upon David et al. (2006).

  18. 18.

    Seehttp://www.omii.ac.uk/about/index.jsp, emphasis added. The foregoing, however, is a rather different rationale than the one offered previously by Program Director Hey’s statement at the September 2004 e-Science All Hands Meeting (http://www.allhands.org.uk/proceedings/proceedings/introduction.pdf): “…Web Services still are ‘work in progress’ so we must adopt conservative strategies to safeguard our UK investments and ensure that we converge on the standards that eventually emerge….”

  19. 19.

    The idiosyncratic features of the Globus license are discussed by David and Spence (2003, pp. 32–33, and Appendix 4).

  20. 20.

    Non-client researchers, after registering and obtaining a login name and password, may proceed to download software packages, but they will not necessarily obtain the underlying source code. David et al. (2006) reported that an attempt to download version 1.0 of OMII’s certificate management tool yielded a tar-ball within which was a jar-file containing java byte-code; procedures for extracting the corresponding java source code from that file are far from straightforward. Since May 2007, OMII has made the source code available (Chang, personal communication). Chang, Mills, and Newhouse (2007) provide reflections on open source and sustainability from the perspective of OMII.

  21. 21.

    Fry et al.’s (2009) structured interview protocol elaborated and modified the extended questionnaire proposed by David et al. (2006).

  22. 22.

    As Fry et al. (2009) point out, “The effort to make the tools or data suitable or robust enough to make them into a commonly used resource may be considerable, and thus represents a Catch-22 situation for researchers: a large effort can be made, which may not be useful, but if it is not attempted, then it cannot be useful in the first place. Nevertheless, all projects expressed the aspiration to contribute to a common resource, even if this was sometimes expressed as a hope rather than a certainty or foregone conclusion.”

  23. 23.

    Coordination and integration problems calling for solutions that take the form of interoperability standards posed particularly difficult challenges for on-going projects in the UK e-Science Pilot Programme, according to Fry et al. (2009), whereas some new software tools required compatibility with existing tools (for example, tools from the CQeSS project which developed e-social Science tools for large quantitative datasets needed to be interoperable with Stata) and this might be technically difficult to implement. Achieving integration with other tools that are currently under development confronts more fundamental uncertainties about the requirements for compatibility or interoperability. The same applies to complying with standards, ontologies, and metadata that are still in the process of development.

  24. 24.

    See, e.g., David and Hall (2006); David (2007). Much of that discussion, however, has focused on the implications of the patenting of research tools, and sui generis legal protection of database rights (in the EU) in the areas of genomics, biogenetics, and proteinomics, the patenting of computer software (in the US) and computer-implemented inventions (in the EU), and extensive patenting of nanotechnology research tools. While those have been very active fields of academic science research, and growing university ownership of patents, they are not represented in the UK’s e-Science core program and so do not appear among the projects included in either the structured interview or the survey samples discussed here.

  25. 25.

    This questionnaire instrument, the Oxford e-Science Information Access Survey (OeSIAS) which was posted on SurveyMonkey (http://www.surveymonkey.com), is reproduced in den Besten and David (2009). Particular questions among the 19 in the survey’s substantive portion (many of which were comprised of several sub-items) are referred to in the following text and footnotes by their number in source, thus [OeSIAS, Q.1].

  26. 26.

    This number represented just over 10% of the projects listed by NeSC, implying a “project response rate” of 25%. The number of individual responses to this survey was larger, because P.I.s receiving the e-mail request were asked also to send it on to non-P.I. members of their project (which yielded an additional 21 responses that are not discussed here; also, in three cases more than one P.I. for a single project returned the questionnaire). The present analysis used only the one with the lowest frequency of “don’t know” responses. The low apparent response rate from P.I.s and projects may be due in some part to the relatively short time interval allowed for those who submitted survey replies to be eligible to receive a book-token gift. The existence of projects that appear more than once in the NeSC database and had multiple (co-) P.I.s also would contribute to reducing the apparent rate of “project” responses.

  27. 27.

    Unlike other survey findings discussed in sections “contract terms and openness in research” and “provision of information access in e-science projects”, the results obtained from the seven items in Survey Question 8 are based on the complete tabulation of the answers from all 54 survey respondents – including both the three cases of reports on multiple projects by a single P.I., and the 21 non-P.I.s.

  28. 28.

    Funding bodies sometimes seek to form larger joint projects by bringing together academics that have submitted separate (competing) proposals, especially where there are opportunities to exploit differences in the applicants’ respective areas of special expertise. For further discussion of the formal legal context of collaborative e-science, see David and Spence (2008, Sect. 2.3) and Fitzgerald (2008, Chs. 6, 11, 12).

  29. 29.

    Among all the respondents who found these three questionnaire items (in Q 8) applicable to the circumstances of their respective projects, approximately 11% said they did not know the answer to the question.

  30. 30.

    Considering only the “classifiable” group of projects, their percentage distribution among the broad “purpose-engagement” clusters is seen to be 31% with middleware (I), 42% with database applications (II), and 27% with end-user communities (III).

  31. 31.

    In compiling the results reported in the text, counts of instances where respondents said the particular question was not applicable, or that they did not know, have been omitted.

  32. 32.

    See den Besten et al. (2009, Table 2), for fuller presentation of the survey results reviewed here than the survey questions in [OeSIAS, Q. 10 and Q. 11].

  33. 33.

    Over half of the projects having more diffuse purposes – that is, purposes not preponderantly oriented toward either construction of middleware, research community usage, or applications and database resources – failed to provide clear answers to questions 16 and 17. Responses from the “other purposes” group are not included in the analysis whose results are described in the text.

  34. 34.

    Specifically, providing access to researchers outside the project was a significant concern for almost two-thirds of the data-centric projects and a third of community-centric projects.

  35. 35.

    Perhaps this question should have been phrased differently, e.g., “Would the project be willing to pay repository charges, and for the inclusion of open access journals?”

  36. 36.

    Eleven respondents listed external access among their project goals, nine said it was not an important concern, and another nine respondents left this question unanswered.

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Acknowledgments

Most of the authors’ research on the underlying data has been supported by ESRC grant RES-149-25-1022 for the Oxford e-Social Science (OeSS) Project on Ethical, Legal and Institutional Dynamics of Grid-enabled e-Sciences. Our thanks go first to Jenny Fry, Jeremy Frey and Mike Fraser for their contributions in connection with the structured interviews, and to Anne Trefethen for her help in the fielding of the online survey of UK e-Science P.I.s. We also are grateful for the institutional support received from several quarters during the research planning stage and the preparation of this essay: the Oxford internet Institute (David, and Schroeder) and the Oxford e-Research Centre (den Besten). David also acknowledges with gratitude the support of the Stanford Institute for Economic Policy Research’s Program on Knowledge, Networks and Institutions for Innovation (KNIIP), for his research and writing on open science which the present work has drawn upon. Responsibility for the judgments expressed, as well as any mistakes and misinterpretations that may be found herein, remains solely ours.

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den Besten, M., David, P.A., Schroeder, R. (2009). Research in e-Science and Open Access to Data and Information. In: Hunsinger, J., Klastrup, L., Allen, M. (eds) International Handbook of Internet Research. Springer, Dordrecht. https://doi.org/10.1007/978-1-4020-9789-8_4

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