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Tuber spp. biodiversity in one of the southernmost European distribution areas

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Part of the book series: Topics in Biodiversity and Conservation ((TOBC,volume 7))

Abstract

The aims of this paper were to study the genetic diversity within and among 6 Tuber taxa, the phylogenetic relationships and the spatial distribution of truffles from the Basilicata region (southern Italy). Molecular analyses, using the internal transcribed spacer region, microsatellites, minisatellites and random amplified polymorphic loci revealed the highest expected intra-specific heterozygosity (He=0.30) in T. aestivum, followed by that of T. mesentericum (He=0.22). T. borchii (He=0.17), T. magnatum (He=0.16), T. aestivum fo. uncinatum (He=0.12) and T. brumale fo. moschatum (He=0.09) showed a lower average heterozygosity. The whole set of markers were demonstrated to be useful in clearly differentiating Tuber taxa, separating them in two distinct groups and in five sub-clusters, each corresponding to one single taxon. The first cluster (T. borchii, T. magnatum and T. brumale fo. moschatum) was more differentiated than the second one (T. aestivum, T. aestivum fo. uncinatum and T. mesentericum). T. brumale fo. moschatum was the most differentiated Tuber taxon. It was more related to the white truffles (the closely related T. borchii and T. magnatum) than to the remaining related black truffles T. aestivum and T. mesentericum. The amount of Tuber species richness was higher over the western side of Basilicata, in cold Lauretum and in Castanetum phytoclimatic Pavari’s zones. A spatial genetic structure was detected for T. aestivum, as shown by the significant correlation between geographic and genetic distances (rs=0.32; P<0.0001). Integration of molecular and geographic diversity patterns can allow the selection of sites for Tuber and Tuber-related biodiversity conservation.

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References

  • Amicucci A, Rossi I, Potenza L, Agostini D, Stocchi V (1997) Use of sequence characterised amplified region and RAPD markers in the identification of the white truffle Tuber magnatum Pico. Biotechnol Tech 11:149–154

    Article  CAS  Google Scholar 

  • Amicucci A, Zambonelli A, Giomaro G, Potenza L, Stocchi V (1998) Identification of ectomycorrhizal fungi of the genus Tuber by species-specific ITS primers. Mol Ecol 7:273–277

    Article  CAS  Google Scholar 

  • Bencivenga M (1998) Ecology and cultivation of Tuber magnatum Pico. In: Proceedings of the first international meeting on “Ecology, Physiology and Cultivation of Edible Mycorrhizal Mushrooms”. Swedish University of Agricultural Sciences, Uppsala, Sweden, 3–4 July, 1998

    Google Scholar 

  • Bencivenga M, Granetti B (1990) Analisi comparativa delle caratteristiche ecologiche di Tuber magnatum Pico e Tuber melanosporum Vitt. nell’Italia centrale. In: Bencivenga M, Granetti B (eds) Atti del II Congr Int sul tartufo. Comunità Montana dei Monti Martani e del Serano, Spoleto, pp 433–434

    Google Scholar 

  • Bertault G, Raymond M, Berthomieu A, Callot G, Fernandez D (1998) Trifling variation in truffles. Nature 394:374

    Article  CAS  Google Scholar 

  • Bertault G, Rousset F, Fernandez D, Berthomieu A, Hochberg ME, Callot G, Raymond M (2001) Population genetics and dynamics of the black truffle in a man-made truffle yield. Heredity 86:451–458

    Article  PubMed  CAS  Google Scholar 

  • Bertini L, Potenza L, Zambonelli A, Amicucci A, Stocchi V (1998) Restriction fragment length polymorphism species-specific patterns in the identification of white truffles. FEMS Microbiol Lett 164:397–401

    Article  PubMed  CAS  Google Scholar 

  • Bertini L, Amicucci A, Agostini D, Polidori E, Potenza L, Guidi C, Stocchi V (1999) A new pair of primers designed for amplification of the ITS region in Tuber species. FEMS Microbiol Lett 173:239–245

    Article  PubMed  CAS  Google Scholar 

  • Buscot F, Wipp D, Di Battista C, Munch JC, Botton B, Martin F (1996) DNA polymorphism in morels: PCR/RFLP analysis of the ribosomal DNA spacers and microsatellite-primed PCR. Mycol Res 100:63–71

    Article  CAS  Google Scholar 

  • Cantore V, Iovino F, Pontecorvo G (1987) Aspetti climatici e zone fitoclimatiche della Basilicata. Consiglio Nazionale delle Ricerche (CNR). Istituto di Ecologia e Idrologia Forestale. Pubblicazione No. 2: pp 3–49, CNR (eds) Cosenza 1987

    Google Scholar 

  • Cerone G, Alba E, Galante M, Frisullo S (1994) Specie fungine del genere Tuber in Basilicata. Micol Italiana 1:9–16

    Google Scholar 

  • Cerone G, Fiore G, Destradis A, Russo G, Alba A (1996) Studi morfologici di ascospore del genere Tuber mediante analisi di immagine. Micol Italiana 2:3–7

    Google Scholar 

  • Cerone G, Marino R, Rana GL (2000) Studi sui funghi ipogei e sulla tartuficoltura della Basilicata. Rivista di Micologia – Bollettino dell’Associazione Micologica Bresadola 4:333–346

    Google Scholar 

  • Cerone G, Fascetti S, Marino R, Rana GL, Pompili M, Coppola E (2002a) Caratteristiche ecologiche di una stazione di Tuber magnatum in Basilicata. Micol e Veget Medit 17(1):73–88

    Google Scholar 

  • Cerone G, Fascetti S, Melucci L, Rana GL, Tagliavini O (2002b) I tartufi della Comunità Montana “Marmo-Platano”. Ars Grafica Villa d’Agri – Potenza, Italy, p 143

    Google Scholar 

  • Cerone G, Rana GL, Tagliavini O (2003) Carta delle vocazioni tartufigene della Basilicata. Sito internet: http://www.basilicatanet.it

  • De Gioia T, Sisto D, Rana GL, Figliuolo G (2005) Genetic structure of the Pleurotus eryngii species-complex. Mycol Res 109(1):71–80

    Article  PubMed  CAS  Google Scholar 

  • Don RH, Cox PT, Wainright BJ, Baker K, Mattick JS (1991) “Touchdown” PCR to circumvent spurious priming during gene amplification. Nucleic Acids Res 79:4008

    Article  Google Scholar 

  • Figliuolo G, Spagnoletti Zeuli PL (2000) A nested analysis to detect relationships between genetic markers and germplasm classes of durum wheat. Plant Genet Resour Newslett 124:44–51

    Google Scholar 

  • Figliuolo G, Perrino P (2004) Genetic diversity and intra-specific phylogeny of Triticum turgidum L. subsp. dicoccon (Schrank) Thell. revealed by RFLPs and SSRs. Genet Resour Crop Evol 51:519–527

    Article  CAS  Google Scholar 

  • Gandeboeuf D, Duprè C, Roeckel-Drevet P, Nicolas P, Chevalier G (1997) Grouping and identification of Tuber species using RAPD markers. Can J Bot 75:36–45

    CAS  Google Scholar 

  • Granetti B (1994) I Tartufi: biologia e tecniche di coltivazione. Micol Italiana 2:63–68

    Google Scholar 

  • Grechko VV (2002) Molecular DNA markers in phylogeny and systematics. Russ J Genet 38(8):851–868

    Article  CAS  Google Scholar 

  • Hijmans RJ, Guarino L, Bussink C, Rojas E (2002) DIVA-GIS Version 2. A geographic information system for the analysis of biodiversity data. Manual. International Potato Center (CIP), Lima, Peru

    Google Scholar 

  • Hodgkin T, Guarino L (1997) Ecogeographical surveys: a review. In: Valdes B et al (eds) Proceedings of the workshop on “Conservation of the Wild Relatives of the European Cultivated Plants”, Palermo (Italy) 1997, pp 21–26

    Google Scholar 

  • Istituto Centrale di Statistica (ISTAT) (1990) Territorio, climatologia e ambiente naturale. In: ISTAT (eds) Le regioni in cifre. Roma, Italy, p 20

    Google Scholar 

  • Latouche GN, Daniel HM, Lee OC, Mitchell TG, Sorrel TC, Meyer W (1997) Comparison of use of phenotypic and genotypic characteristics for identification of species of the amorph genus Candida and related teleomorph yeast species. J Clin Microbiol 35:3171–3180

    PubMed  CAS  Google Scholar 

  • Lewis PO, Zaykin D (2001) Genetic data analysis: computer program for the analysis of allelic data. Version 1.0 (d16c). Free program distributed by the authors over the internet from http://www.lewis.eeb.uconn.edu/lewishome/software.html

  • Longato S, Bonfante P (1997) Molecular identification of mycorrhizal fungi by direct amplification of microsatellite regions. Mycol Res 101(4):425–432

    Article  CAS  Google Scholar 

  • Loveless MD, Hamrick JL (1984) Ecological determinants of genetic structure in plant populations. Ann Rev Ecol Syst 15:65–95

    Article  Google Scholar 

  • Lulli L, Bragato G, Gardin L (1999) Occurrence of Tuber melanosporum in relation to soil surface layer properties and soil differentiation. Plant Soil 214:85–92

    Article  CAS  Google Scholar 

  • Mannozzi Torini L (1999) Il tartufo e la sua coltivazione. Edagricole-Edizioni Edagricole, Bologna, Italy

    Google Scholar 

  • Marino R (1999) Studi sul tartufo in Basilicata. MS Thesis, Università degli Studi della Basilicata, Facoltà di Agraria, Potenza, Italy

    Google Scholar 

  • Marino R, Cerone G, Rana GL (2003) Studi sui funghi ipogei della Basilicata. II contributo. Rivista di Micologia – Bollettino dell’Associazione Micologica Bresadola 1:53–62

    Google Scholar 

  • Martin F, Diez J, Dell B, Delaruelle C (2002) Phylogeography of the ectomycorrhizal Pisolithus species as inferred from nuclear ribosomal DNA ITS sequences. New Phytol 153:345–357

    Article  CAS  Google Scholar 

  • Mello A, Cantisani A, Vizzini A, Bonfante P (2002) Genetic variability of Tuber uncinatum and its relatedness to other black truffles. Environ Microbiol 4(10):584–594

    Article  PubMed  CAS  Google Scholar 

  • Montacchini F, Caramiello R (1968) Ecologia del Tuber magnatum in Piemonte. Allionia 14:1–29

    Google Scholar 

  • Montecchi A, Sarasini M (2000) Funghi Ipogei d’Europa. A.M.B. (eds) Fondazione Centro Studi Micologici. Trento, Italy, pp 714

    Google Scholar 

  • Moyersoen B, Beever RE, Martin F (2003) Genetic diversity of Pisolithus in New Zealand indicates multiple long-distance dispersal from Australia. New Phytol 160:569–579

    Article  Google Scholar 

  • Murat C, Diez J, Luis P, Delaruelle C, Duprè C, Chevalier G, Bonfante P, Martin F (2004) Polymorphism at the ribosomal DNA ITS and its relation to postglacial re-colonization routes of the Perigord truffle Tuber melanosporum. New Phytol 164:401–411

    Article  CAS  Google Scholar 

  • Nei M (1987) Molecular evolutionary genetics. Columbia University Press, New York

    Google Scholar 

  • Nei M, Li WH (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci USA 76:5269–5273

    Article  PubMed  CAS  Google Scholar 

  • Pacioni G, Pomponi G (1991) Genotypic patterns of some Italian populations of the Tuber aestivum–T. mesentericum complex. Mycotaxon XLII:171–179

    Google Scholar 

  • Pacioni G, Comandini O (1999) Tuber. In: Cairney JWG, Chambers SM (eds) Ectomycorrhizal fungi. Key genera in profile. Springer, Berlin Heidelberg, Germany, pp 163–186, Chap.6

    Google Scholar 

  • Paolocci F, Rubini A, Granetti B, Arcioni S (1997) Typing Tuber melanosporum and Chinese black truffle species by molecular markers. FEMS Microbiol Lett 153:255–260

    Article  PubMed  CAS  Google Scholar 

  • Pavari A (1916) Studio preliminare sulla coltura di specie forestali esotiche in Italia. Parte generale, vol I. Annali del R. Ist. Sup. Forestale Naz

    Google Scholar 

  • Rebelo AG, Sigfried WR (1992) Where should nature reserves be located in the Cape Floristic Region, South Africa? Models for the spatial configuration of a reserve network aimed at maximizing the protection of diversity. Conserv Biol 6:243–252

    Article  Google Scholar 

  • Regione Basilicata (2003) Il progetto carta pedolgica della Regione Basilicata in scala 1:250.000. In: Workshop “Un’indagine pedologica per conoscere, tutelare e valorizzare il territorio e l’agricoltura lucana”. Potenza (Italy), 7 April 2003. Regione Basilicata Dipartimento Agricoltura e Sviluppo Rurale, pp 1–54

    Google Scholar 

  • Riousset L, Riousset G, Chevalier G, Bardet MC (2001) Truffes d’Europe et de Chine. INRA, Paris, 181 pp

    Google Scholar 

  • Rossi I, Bartolacci B, Potenza L, Bertini L, Barbieri E, Stocchi V (2000) Identification of wh ite truffle species using RAPD markers. Plant Soil 219:127–133

    Article  CAS  Google Scholar 

  • Rubini A, Paolocci F, Granetti B, Arcioni S (1998) Single step molecular characterization of morphologically similar black truffle species. FEMS Microbiol Lett 164:7–12

    CAS  Google Scholar 

  • Rubini A, Topini F, Riccioni F, Paolocci F, Arcioni S (2004) Isolation and characterization of polymorphic microsatellite loci in white truffle (Tuber magnatum). Mol Ecol Notes 4:116–118

    Article  CAS  Google Scholar 

  • SAS (1993) SAS/STAT, user’s guide, vol 2. SAS Institute Inc., Cary, NC

    Google Scholar 

  • Tagliavini O (1999) I tartufi della Basilicata. In: Consiglio Regionale della Basilicata (eds) Basilicata Regione Notizie, Potenza, Italy, No. 91, pp 69–78

    Google Scholar 

  • Tocci A, Veracini A, Zazzi A (1995) Indagini preliminari sull’ecologia del tartufo bianco (Tuber magnatum) in Molise. Micol Italiana 2:64–79

    Google Scholar 

  • Weden C, Danell E, Camacho FJ, Backlund A (2004) The population of the hypogeous fungus Tuber aestivum syn. T. uncinatum on the island of Gotland. Mycorrhiza 14:19–23

    Article  PubMed  Google Scholar 

  • Weir BS (1996) Genetic data analysis II. Sinawer Associates, Inc., Sunderland Mass, CA

    Google Scholar 

  • White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols. A guide to methods and applications. Academic Press, San Diego, CA, pp 315–322

    Google Scholar 

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Correspondence to G. Figliuolo .

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David L. Hawksworth Alan T. Bull

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Pomarico, M., Figliuolo, G., Rana, G.L. (2006). Tuber spp. biodiversity in one of the southernmost European distribution areas. In: Hawksworth, D.L., Bull, A.T. (eds) Biodiversity and Conservation in Europe. Topics in Biodiversity and Conservation, vol 7. Springer, Dordrecht. https://doi.org/10.1007/978-1-4020-6865-2_15

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