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Two-Dimensional BAC/SDS-PAGE for Membrane Proteomics

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Subcellular Proteomics

Part of the book series: Subcellular Biochemistry ((SCBI,volume 43))

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References

  • Buxbaum, E. (2003) Cationic electrophoresis and electrotransfer of membrane glycoproteins. Anal. Biochem. 314, 70–76.

    Article  PubMed  CAS  Google Scholar 

  • Coughenour, H.D., Spaulding, R.S. and Thompson, C.M. (2004) The synaptic vesicle proteome: a comparative study in membrane protein identification. Proteomics 4, 3141–3155.

    Article  PubMed  CAS  Google Scholar 

  • Daub, H., Blencke, S., Habenberger, P., Kurtenbach, A., Dennenmoser, J., Wissing, J., Ullrich, A. and Cotten, M. (2002) Identification of SRPK1 and SRPK2 as the major cellular protein kinases phosphorylating hepatitis B virus core protein. J. Virol. 76, 8124–8137.

    Article  PubMed  CAS  Google Scholar 

  • Diao, A., Rahman, D., Pappin, D.J., Lucocq, J. and Lowe, M. (2003) The coiled-coil membrane protein golgin-84 is a novel rab effector required for Golgi ribbon formation. J. Cell Biol. 160, 201–212.

    Article  PubMed  CAS  Google Scholar 

  • Fujiki, Y., Hubbard, A.L., Fowler, S. and Lazarow, P.B. (1982) Isolation of intracellular membranes by means of sodium carbonate treatment: application to endoplasmic reticulum. J. Cell Biol. 93, 97–102.

    Article  PubMed  CAS  Google Scholar 

  • Godl, K., Wissing, J., Kurtenbach, A., Habenberger, P., Blencke, S., Gutbrod, H., Salassidis, K., Stein-Gerlach, M., Missio, A., Cotten, M. and Daub, H. (2003) An efficient proteomics method to identify the cellular targets of protein kinase inhibitors. Proc. Natl. Acad. Sci. U.S.A. 100, 15434–15439.

    Article  PubMed  CAS  Google Scholar 

  • Hartinger, J., Stenius, K., Hogemann, D. and Jahn, R. (1996) 16-BAC/SDS-PAGE: a two-dimensional gel electrophoresis system suitable for the separation of integral membrane proteins. Anal. Biochem. 240, 126–133.

    Article  PubMed  CAS  Google Scholar 

  • Kramer, M.L. (2006) A new multiphasic buffer system for benzyldimethyl-n-hexadecylammonium chloride polyacrylamide gel electrophoresis of proteins providing efficient stacking. Electrophoresis 27, 347–356.

    Article  PubMed  CAS  Google Scholar 

  • Luche, S., Santoni, V. and Rabilloud, T. (2003) Evaluation of nonionic and zwitterionic detergents as membrane protein solubilizers in two-dimensional electrophoresis. Proteomics 3, 249–253.

    Article  PubMed  CAS  Google Scholar 

  • Macfarlane, D.E. (1983) Use of benzyldimethyl-n-hexadecylammonium chloride (“16-BAC”), a cationic detergent, in an acidic polyacrylamide gel electrophoresis system to detect base labile protein methylation in intact cells. Anal. Biochem. 132, 231–235.

    Article  PubMed  CAS  Google Scholar 

  • Macfarlane, D.E. (1989) Two dimensional benzyldimethyl-n-hexadecylammonium chloride – sodium dodecyl sulfate preparative polyacrylamide gel electrophoresis: a high capacity high resolution technique for the purification of proteins from complex mixtures. Anal. Biochem. 176, 457–463.

    Article  PubMed  CAS  Google Scholar 

  • Moebius, J., Zahedi, R.P., Lewandrowski, U., Berger, C., Walter, U. and Sickmann, A. (2005) The human platelet membrane proteome reveals several new potential membrane proteins. Mol. Cell Proteomics 4, 1754–1761.

    Article  PubMed  CAS  Google Scholar 

  • Molloy, M.P. (2000) Two-dimensional electrophoresis of membrane proteins using immobilized pH gradients. Anal. Biochem. 280, 1–10.

    Article  PubMed  CAS  Google Scholar 

  • Olsson, I., Larsson, K., Palmgren, R. and Bjellqvist, B. (2002) Organic disulfides as a means to generate streak-free two-dimensional maps with narrow range basic immobilized pH gradient strips as first dimension. Proteomics 2, 1630–1632.

    Article  PubMed  CAS  Google Scholar 

  • Otto, H., Dreger, M., Bengtsson, L. and Hucho, F. (2001) Identification of tyrosine-phosphorylated proteins associated with the nuclear envelope. Eur. J. Biochem. 268, 420–428.

    Article  PubMed  CAS  Google Scholar 

  • Rais, I., Karas, M. and Schagger, H. (2004) Two-dimensional electrophoresis for the isolation of integral membrane proteins and mass spectrometric identification. Proteomics 4, 2567–2571.

    Article  PubMed  CAS  Google Scholar 

  • Reinders, J., Zahedi, R.P., Pfanner, N., Meisinger, C. and Sickmann, A. (2006a) Toward the Complete Yeast Mitochondrial Proteome: Multidimensional Separation Techniques for Mitochondrial Proteomics. J. Proteome Res. 5, 1543–1554.

    Article  PubMed  CAS  Google Scholar 

  • Reinders, Y., Schulz, I., Graf, R. and Sickmann, A. (2006b) Identification of novel centrosomal proteins in Dictyostelium discoideum by comparative proteomic approaches. J. Proteome Res. 5, 589–598.

    Article  PubMed  CAS  Google Scholar 

  • Santoni, V., Molloy, M. and Rabilloud, T. (2000) Membrane proteins and proteomics: un amour impossible? Electrophoresis 21, 1054–1070.

    Article  PubMed  CAS  Google Scholar 

  • Unlu, M., Morgan, M.E. and Minden, J.S. (1997) Difference gel electrophoresis: a single gel method for detecting changes in protein extracts. Electrophoresis 18, 2071–2077.

    Article  PubMed  CAS  Google Scholar 

  • Zahedi, R.P., Meisinger, C. and Sickmann, A. (2005) Two-dimensional benzyldimethyl-n-hexadecylammonium chloride/SDS-PAGE for membrane proteomics. Proteomics 5, 3581–3588.

    Article  PubMed  CAS  Google Scholar 

  • Zahedi, R.P., Sickmann, A., Boehm, A.M., Winkler, C., Zufall, N., Schonfisch, B., Guiard, B., Pfanner, N. and Meisinger, C. (2006) Proteomic analysis of the yeast mitochondrial outer membrane reveals accumulation of a subclass of preproteins. Mol. Biol. Cell 17, 1436–1450.

    Article  PubMed  CAS  Google Scholar 

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Zahedi, R., Moebius, J., Sickmann, A. (2007). Two-Dimensional BAC/SDS-PAGE for Membrane Proteomics. In: Bertrand, E., Faupel, M. (eds) Subcellular Proteomics. Subcellular Biochemistry, vol 43. Springer, Dordrecht. https://doi.org/10.1007/978-1-4020-5943-8_2

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