Two Color Arrays

Part of the Use R! book series (USE R)


In this case study, two RNA samples are compared to each other on 60 mer oligonucleotide microarrays using two-color labeling. The lab covers data import, visualization, exploration and normalization of the data, and the identification of differentially expressed genes.


Volcano Plot Spreadsheet Program Green Background Empirical Standard Deviation False Color Image 


Unable to display preview. Download preview PDF.

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Copyright information

© Springer Science+Business Media, LLC 2008

Authors and Affiliations

  1. 1.Division of Public Health Sciences, Program in Computational BiologyFred Hutchinson Cancer Research CenterSeattleUSA
  2. 2.Wellcome Trust Genome CampusEuropean Bioinformatics Institute, EMBL Outstation HinxtonCambridgeUK

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