Skip to main content

3 IS-RFLP: A Powerful Tool for Geographical Clustering of Global Isolates of Yersinia pestis

  • Chapter

Part of the book series: Advances In Experimental Medicine And Biology ((AEMB,volume 603))

Multiple copies of several classes of insertion sequences (IS) are found in the genome of Yersinia pestis, the causative agent of bubonic and pneumonic plague. We used the genetic instability generated by these IS to develop a method (designated 3IS-RFLP) based on the restriction fragment length polymorphism of the IS100, IS285 and IS1541 elements for studying Y. pestis strains of worldwide origin. We show that 3IS-RFLP is a powerful tool to group Y. pestis isolates according to their geographical origin, and therefore that this method may be valuable for investigating the origin of new or re-emerging plague foci or for addressing forensic issues.

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   84.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  • Achtman, M., Morelli, G., Zhu, P., Wirth, T., Diehl, I., Kusecek, B., Vogler, A.J., Wagner D.M., Allender, C.J., Easterday, W.R., Chenal-Francisque, V., Worsham, P., Thomson, N.R., Parkhill, J., Lindler, L.E., Carniel, E. and Keim, P. (2004) Microevolution and history of the plague bacillus, Yersinia pestis. Proc. Natl. Acad. Sci. U.S.A., 101, 17837-17842.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Carniel, E., Mercerau-Puijalon, O. and Bonnefoy, S. (1989) The gene coding for the 190,000-dalton iron-regulated protein of Yersinia species is present only in the highly pathogenic strains. Infect. Immun. 57, 1211-1217.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Guiyoule, A., Grimont, F., Iteman, I., Grimont, P.A.D., Lefèvre, M. and Carniel, E. (1994) Plague pandemics investigated by ribotyping of Yersinia pestis strains. J. Clin. Microbiol. 32, 634-641.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Hunter, P.R. and Gaston, M.A. (1988) Numerical index of the discriminatory ability of typing systems: an application of Simpson’s index of diversity. J. Clin. Microbiol. 26, 2465-2466.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Torrea, G., Chenal-Francisque, V., Leclercq, A. and Carniel, E. (2006) Efficient tracing of global isolates of Yersinia pestis by restriction fragment length polymorphism analysis using three insertion sequences as probes. J. Clin. Microbiol. 44, 2084-2092.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • World Health Organization (2004) Human plague in 2002 and 2003. Wkly. Epidemiol. Rec. 79, 301-306.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2007 Springer Science+Business Media, LLC

About this chapter

Cite this chapter

Leclercq, A.J.L., Carniel, E., Chenal-Francisque, V., Torrea, G. (2007). 3 IS-RFLP: A Powerful Tool for Geographical Clustering of Global Isolates of Yersinia pestis. In: Perry, R.D., Fetherston, J.D. (eds) The Genus Yersinia. Advances In Experimental Medicine And Biology, vol 603. Springer, New York, NY. https://doi.org/10.1007/978-0-387-72124-8_29

Download citation

Publish with us

Policies and ethics