Skip to main content

Homeobox-Containing Genes in Limb Regeneration

  • Chapter
HOX Gene Expression

Abstract

Early investigations established an important role for homeobox-containing genes in the initiation of regeneration, as well as in the later pattern formation events leading to a new limb. The recent increased research on the mechanisms of regeneration, along with the fact that urodele amphibians provide the only opportunity to understand how vertebrates can regenerate their limbs, has led to a renewed interest in the functioning of this important group of genes during salamander limb regeneration. It appears that all vertebrates, including humans, have impressive regenerative abilities as embryos; however, all but urodeles lose much of these abilities as development proceeds. In contrast, cells in adult urodeles are unique in their ability to revert to an embryonic state (dedifferentiate) in order to recapitulate embryo-genesis, Consequently, urodeles are the only adult vertebrates that can completely and perfecdy regenerate entire limbs, and thus they offer a unique opportunity to gain critical insights for future advances in regenerative medicine. Much data indicate that a large number of homeobox genes play important roles in the initiation and regulation of limb regeneration. In some instances, the regulatory mechanisms controlling homeobox gene expression appear comparable to what is observed in developing limbs; whereas, in others they different dramatically. In spite of differences in spatial and temporal expression patterns, homeobox gene function is conserved in both regeneration and development. Research on the role of homeobox genes is poised to move forward, particularly in the context of the early stages that are unique to regeneration, and thus are critical in achieving the goal of inducing human regeneration. These efforts will be possible because of the new genetic resources for research utilizing the axolod as a model system.

Homeobox-containing genes were among the first genes identified as having a significant function in the regulation of embryonic development. Although the pioneering work was carried out with Drosophila, it soon became apparent that the structure and function of these genes is highly conserved, and that they play important roles in vertebrate development. Particularly evident was their function in the control of body and appendage pattern, thus validating the premolecular biology predictions that the mechanisms controlling pattern formation would be conserved among such divergent organisms as flies, grasshoppers and salamanders.13 It thus was not long before studies began to demonstrate a role for homeobox genes in the control of salamander limb regeneration.

After an exciting start, investigations into the role of homeobox genes in regeneration has languished in recent years. Fortunately, there is currently a much increased interest in regeneration, along with a renewed appreciation of the fact that urodele amphibians provide the only opportunity to understand how vertebrates can regenerate their limbs. It appears that all vertebrates, including humans, have impressive regenerative abilities as embryos; however, all but urodeles lose much of these abilities as development proceeds (see ref. 4). In contrast, cells in adult urodeles are unique in their ability to revert to an embryonic state (dedifferentiate) in order to recapitulate embryogenesis (see ref. 5). Consequently, urdeles are the only adult vertebrates that can completely and perfectly regenerate entire limbs, and thus they offer a unique opportunity to gain critical insights for future advances in regenerative medicine.

Data indicate that several homeobox genes play important roles in the initiation and regulation of limb regeneration. Our goal in writing this review is to stimulate future efforts in the field of limb regeneration research. We have elected to not consider data on the regeneration of limb buds, because they do not provide insights into the early critical events of dedifferentiation and blastema formation that are unique to adult urodeles. It is these early steps that will need to be induced in order to stimulate human regeneration. The cells of the embryo by contrast, are already immature, thus bypassing the need for dedifferentiation. Nevertheless, there is evidence for important functional roles for homeobox genes in limb bud regeneration (e.g., see refs. 6,7). In this chapter, we begin by reviewing the early studies that established the importance of homeobox genes in adult limb regeneration. In the second half, we focus on what we consider to be the emerging areas of limb regeneration research with respect to the function of homeobox genes.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 169.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 219.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Bryant SV, French V, Bryant PJ. Distal regeneration and symmetry. Science 1981; 212:993–1002.

    Article  PubMed  Google Scholar 

  2. French V, Bryant PJ, Bryant SV. Pattern regulation in epimorphic fields. Science 1976; 193:969–981.

    Article  PubMed  CAS  Google Scholar 

  3. Wolpert L. Positional information and pattern formation. Curr Top Dev Biol 1971; 6:183–224.

    Article  PubMed  CAS  Google Scholar 

  4. Gardiner DM. Ontogenetic decline of regenerative ability and the stimulation of human regeneration. Rejuvenation Res 2005; 8(3):141–153.

    Article  PubMed  CAS  Google Scholar 

  5. Bryant SV, Endo T, Gardiner DM. Vertebrate limb regeneration and the origin of limb stem cells. Int J Dev Biol 2002; 46(7):887–896.

    PubMed  Google Scholar 

  6. Endo T, Tamura K, Ide H. Analysis of gene expressions during Xenopus forelimb regeneration. Dev Biol 2000; 220(2):296–306.

    Article  PubMed  CAS  Google Scholar 

  7. Hayamizu TF, Wanek N, Taylor G et al. Regeneration of HoxD expression domains during pattern regulation in chick wing buds. Dev Biol 1994; 161:504–512.

    Article  PubMed  CAS  Google Scholar 

  8. Geraudie J, Ferretti P. Gene expression during amphibian limb regeneration. Int Rev Cytol 1998; 180:1–50.

    PubMed  CAS  Google Scholar 

  9. Savard P, Gates PB, Brockes JP. Position dependent expression of a homeobox gene transcript in relation to amphibian limb regeneration. EMBO J 1988; 7:4275–4282.

    PubMed  CAS  Google Scholar 

  10. Simon HG, Tabin CJ. Analysis of Hox-4.5 and Hox-3.6 expression during newt limb regeneration: Differential regulation of paralagous Hox genes suggest different roles for members of different Hox clusters. Development 1993; 117:1397–1407.

    PubMed  CAS  Google Scholar 

  11. Ferretti P, Ghosh S. Expression of regeneration-associated cytoskeletal proteins reveals differences and similarities between regenerating organs. Dev Dyn 1997; 210(3):288–304.

    Article  PubMed  CAS  Google Scholar 

  12. Gardiner DM, Blumberg B, Komine Y et al. Regulation of HoxA expression in developing and regenerating axolotl limbs. Development 1995; 121:1731–1741.

    PubMed  CAS  Google Scholar 

  13. Beauchemin M, Savard P. Expression of five homeobox genes in the adult newt appendages and regeneration blastemas. In: Fallon JF et al, eds. Limb Development and Regeneration. New York: Wiley-Liss, 1993.

    Google Scholar 

  14. Carlson MRJ, Komine Y, Bryant SV et al. Expression of Hoxb13 and Hoxcl0 in developing and regenerating axolotl limbs and tails. Dev Biol 2001; 229:396–406.

    Article  PubMed  CAS  Google Scholar 

  15. Muneoka K, Bryant SV. Evidence that patterning mechanisms in developing and regenerating limbs are the same. Nature 1982; 298:369–371.

    Article  PubMed  CAS  Google Scholar 

  16. Gardiner DM, Endo T, Bryant SV. The molecular basis of amphibian limb regeneration: Integrating the old with the new. Semin Cell Dev Biol 2002; 13(5):345–352.

    Article  PubMed  CAS  Google Scholar 

  17. Gardiner DM, Bryant SV. The tetrapod limb. In: Ferretti P, Geraudie J, eds. Cellular and Molecular Basis of Regeneration: From Invertebrates to Humans. New York: Wiley and Sons, Inc., 1998:187–205.

    Google Scholar 

  18. Shubin NH, Alberch P. A morphogenetic approach to the origin and basic organization of the tetrapod limb. Evol Biol 1986; 20:319–387.

    Google Scholar 

  19. Torok MA, Gardiner DM, Shubin NH et al. Expression of HoxD genes in developing and regenerating axolotl limbs. Dev Biol 1998; 200:225–233.

    Article  PubMed  CAS  Google Scholar 

  20. Peterson RL, Papenbrock T, Davda MM et al. The murine HoxC cluster contains five neighboring AbdB-related Hox genes that show unique spatially coordinated expression in posterior embryonic subregions. Meeh Dev 1994; 47:253–260.

    Article  CAS  Google Scholar 

  21. Suzuki M, Satoh A, Ide H et al. Nerve-dependent and-independent events in blastema formation during Xenopus froglet limb regeneration. Dev Biol 2005; 286(1):361–375.

    Article  PubMed  CAS  Google Scholar 

  22. Carlson MRJ, Bryant SV, Gardiner DM. Expression of Msx-2 during development, regeneration, and wound healing in axolotl limbs. J Exp Zool 1998; 282(6):715–723.

    Article  PubMed  CAS  Google Scholar 

  23. Koshiba K, Kuroiwa A, Yamamoto H et al. Expression of Msx genes in regenerating and developing limbs of axolotl. J Exp Zool 1998; 282(6):703–714.

    Article  PubMed  CAS  Google Scholar 

  24. Simon HG, Nelson C, Goff D et al. Differential expression of myogenic regulatory genes and Msx-1 during dedifferentiation and redifferentiation of regenerating amphibian limbs. Dev Dynamics 1995; 202:1–12.

    CAS  Google Scholar 

  25. Imokawa Y, Yoshizato K. Expression of Sonic hedgehog gene in regenerating newt limb blastema recapitulates that in developing limb buds. Proc Natl Acad Sci USA 1997; 94(17):9159–9164.

    Article  PubMed  CAS  Google Scholar 

  26. Torok MA, Gardiner DM, Izpisua-Belmonte JC et al. Sonic hedgehog (shh) expression in developing and regenerating axolotl limbs. J exp Zool 1999; 284:197–206.

    Article  PubMed  CAS  Google Scholar 

  27. Mescher AL. The cellular basis of limb regeneration in urodeles. Int J Dev Biol 1996; 40:785–795.

    PubMed  CAS  Google Scholar 

  28. Muneoka K, Fox W, Bryant SV. Cellular contribution from dermis and cartilage to the regenerating limb blastema in axolotls. Dev Biol 1986; 116:256–260.

    Article  PubMed  CAS  Google Scholar 

  29. Tank PW, Holder N. The distribution of cells in the upper forelimbs of the axolotl. J Exp Zool 1979; 209:435–442.

    Article  Google Scholar 

  30. Han M, Yang X, Farrington JE et al. Digit regeneration is regulated by Msxl and BMP4 in fetal mice. Development 2003; 130(21):5123–5132.

    Article  PubMed  CAS  Google Scholar 

  31. Muller TL, Ngo-Muller V, Reginelli A et al. Regeneration in higher vertebrates: Limb buds and digit tips. Semin Cell Dev Biol 1999; 10:405–413.

    Article  PubMed  CAS  Google Scholar 

  32. Lee H, Habas R, Abate-Shen C. MSX1 cooperates with histone H1b for inhibition of transcription and myogenesis. Science 2004; 304(5677):1675–1678.

    Article  PubMed  CAS  Google Scholar 

  33. Cameron JA, Hilgers AR, Hinterberger TJ. Evidence that reserve cells are a source of regenerated adult newt muscle in-vitro. Nature 1986; 321(6070):607–610.

    Article  Google Scholar 

  34. Kumar A, Velloso CP, Imokawa Y et al. Plasticity of retrovirus-labelled myotubes in the newt limb regeneration blastema. Dev Biol 2000; 218:125–136.

    Article  PubMed  CAS  Google Scholar 

  35. Lo DC, Allen F, Brockes JP. Reversal of muscle differentiation during urodele limb regeneration. Proc Natl Acad Sci USA 1993; 90(15):7230–7234.

    Article  PubMed  CAS  Google Scholar 

  36. McGann CJ, Odelberg SJ, Keating MT. Mammalian myotube dedifferentiation induced by newt regeneration extract. Proc Natl Acad Sci USA 2001; 98(24):13699–13704.

    Article  PubMed  CAS  Google Scholar 

  37. Odelberg SJ, Kollhoff A, Keating MT. Dedifferentiation of mammalian myotubes induced by msxl. Cell 2000; 103:1099–1109.

    Article  PubMed  CAS  Google Scholar 

  38. Endo T, Bryant SV, Gardiner DM. A stepwise model system for limb regeneration. Dev Biol 2004; 270(1):135–145.

    Article  PubMed  CAS  Google Scholar 

  39. Mullen L, Bryant SV, Torok MA et al. Nerve dependency of regeneration: The role of Distal-less and FGF signaling in amphibian limb regeneration. Development 1996; 122(11):3487–3497.

    PubMed  CAS  Google Scholar 

  40. Smith JJ, Kump DK, Walker JA et al. A comprehensive expressed sequence tag linkage map for tiger salamander and Mexican axolotl: Enabling gene mapping and comparative genomics in Ambystoma. Genetics 2005; 171(3):1161–1171.

    Article  PubMed  CAS  Google Scholar 

  41. Habermann B, Bebin AG, Herklotz S et al. An Ambystoma mexicanum EST sequencing project: Analysis of 17,352 expressed sequence tags from embryonic and regenerating blastema cDNA libraries. Genome Biol 2004; 5(9):R67.

    Article  PubMed  Google Scholar 

  42. Putta S, Smith JJ, Walker JA et al. From biomedicine to natural history research: EST resources for ambystomatid salamanders. BMC Genomics 2004; 5(1):54.

    Article  PubMed  Google Scholar 

  43. Smith JJ, Putta S, Walker JA et al. Sal-Site: Integrating new and existing ambystomatid salamander research and informational resources. BMC Genomics 2005; 6:181.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to David M. Gardiner .

Rights and permissions

Reprints and permissions

Copyright information

© 2007 Landes Bioscience and Springer Science+Business Media

About this chapter

Cite this chapter

Gardiner, D.M., Bryant, S.V. (2007). Homeobox-Containing Genes in Limb Regeneration. In: HOX Gene Expression. Springer, New York, NY. https://doi.org/10.1007/978-0-387-68990-6_7

Download citation

Publish with us

Policies and ethics