Abstract
The most important interactions between cellular molecules have a high affinity, are unique and specific, and require a network approach for a detailed description. Molecular chaperones usually have many first and second neighbors in protein-protein interaction networks and they play a prominent role in signaling and transcriptional regulatory networks of the cell. Chaperones may uncouple protein, signaling, membranous, organellar and transcriptional networks during stress, which gives an additional protection for the cell at the network-level. Recent advances uncovered that chaperones act as genetic buffers stabilizing the phenotype of various cells and organisms. This chaperone effect on the emergent properties of cellular networks may be generalized to proteins having a specific, central position and low affinity, weak links in protein networks. Cellular networks are preferentially remodeled in various diseases and aging, which may help us to design novel therapeutic and anti-aging strategies.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Barabasi AL, Oltvai ZN. Network biology: Understanding the cell’s functional organization. Nat Rev Genet 2004; 5:101–113.
Albert R. Scale-free networks in cell biology. J Cell Sci 2005; 118:4947–4957.
Csermely P. Weak links: Stabilizers of complex systems from proteins to social networks. Heidelberg: Springer Verlag, 2006.
von Mering C, Krause R, Snel B et al. Comparative assessment of large-scale data sets of protein-protein interactions. Nature 2002; 417:399–403.
Rual JF, Venkatesan K, Hao T et al. Towards a proteome-scale map of the human protein-protein interaction network. Nature 2005; 437:1173–1178.
Stelzl U, Worm U, Lalowski M et al. A human protein-protein interaction network: A resource for annotating the proteome. Cell 2005; 122:957–968.
White MA, Anderson RG. Signaling networks in living cells. Annu Rev Pharmacol Toxicol 2005; 45:587–603.
Borodina I, Nielsen J. From genomes to in silico cells via metabolic networks. Curr Opin Biotechnol 2005; 16:350–355.
Blais A, Dynlacht BD. Constructing transcriptional regulatory networks. Genes Dev 2005; 19:1499–1511.
Arita M. The metabolic world of Escherichia coli is not small. Proc Natl Acad Sci USA 2004; 101:1543–1547.
Ma HW, Zeng AP. Reconstruction of metabolic networks from genome data and analysis of their global structure for various organisms. Bioinformatics 2003; 19:220–277.
Tanaka R, Yi TM, Doyle J. Some protein interaction data do not exhibit power law statistics. FEBS Lett 2005; 579:5140–5144.
Tsigelny IF, Nigam SK. Complex dynamics of chaperone-protein interactions under cellular stress. Cell Biochem Biophys 2004; 40:263–276.
Csermely P. Strong links are important-But weak links stabilize them. Trends Biochem Sci 2004; 29:331–334.
Zhao R, Davey M, Hsu YC et al. Navigating the chaperone network: An integrative map of physical and genetic interactions mediated by the hsp90 chaperone. Cell 2005; 120:715–727.
Nardai G, Vegh E, Prohaszka Z et al. Chaperone-related immune dysfunctions: An emergent property of distorted chaperone-networks. Trends Immunol 2006; 27:74–79
Soti C, Pal C, Papp B et al. Chaperones as regulatory elements of cellular networks. Curr Op Cell Biol 2005; 17:210–215.
Frydman J. Folding of newly translated proteins in vivo: The role of molecular chaperones. Annu Rev Biochem 2001; 70:603–647.
Kleizen B, Braakman I. Protein folding and quality control in the endoplasmic reticulum. Curr Opin Cell Biol 2004; 16:343–349.
Young JC, Agashe VR, Siegers K et al. Pathways of chaperone-mediated protein folding in the cytosol. Nat Rev Mol Cell Biol 2004; 5:781–791.
Blatch GL, ed. Networking of Chaperones by Co-Chaperones. Georgetown: Landes Bioscience, 2006.
Young JC, Hoogenraad NJ, Hartl FU. Molecular chaperones Hsp90 and Hsp70 deliver preproteins to the mitochondrial import receptor Tom70. Cell 2003; 112:41–50.
Imai J, Maruya M, Yashiroda H et al. The molecular chaperone Hsp90 plays a role in the assembly and maintenance of the 26S proteasome. EMBO J 2003; 22:3557–3567.
Whittier JE, Xiong Y, Rechsteiner MC et al. Hsp90 enhances degradation of oxidized calmodulin by the 20 S proteasome. J Biol Chem 2004; 279:46135–46142.
Tsvetkova NM, Horvath I, Torok Z et al. Small heat-shock proteins regulate membrane lipid polymorphism. Proc Natl Acad Sci USA 2002; 99:13504–13509.
Torok Z, Horvath I, Goloubinoff P et al. Evidence for a lipochaperonin: Association of active protein-folding GroESL oligomers with lipids can stabilize membranes under heat shock conditions. Proc Natl Acad Sci USA 1997; 94:2192–2197.
Torok Z, Goloubinoff P, Horvath I et al. Synechocystis HSP17 is an amphitropic protein that stabilizes heat-stressed membranes and binds denatured proteins for subsequent chaperone-mediated refolding. Proc Natl Acad Sci USA 2001; 98:3098–3103.
Filippin L, Magalhaes PJ, Di Benedetto G et al. Stable interactions between mitochondria and endoplasmic reticulum allow rapid accumulation of calcium in a subpopulation of mitochondria. J Biol Chem 2003; 278:39224–39234.
Aon MA, Cortassa S, O’Rourke B. Percolation and criticality in a mitochondrial network. Proc Natl Acad Sci USA 2004; 101:4447–4452.
Szabadkai G, Simoni AM, Chami M et al. Drp-1-dependent division of the mitochondrial network blocks intraorganellar Ca2+ waves and protects against Ca2+-mediated apoptosis. Mol Cell 2004; 16:59–68.
Wolosewick JJ, Porter KR. Microtrabecular lattice of the cytoplasmic ground substance. Artifact or reality. J Cell Biol 1979; 82:114–139.
Schliwa M, van Blerkom J, Porter KR. Stabilization of the cytoplasmic ground substance in detergent-opened cells and a structural and biochemical analysis of its composition. Proc Natl Acad Sci USA 1981; 78:4329–4333.
Clegg JS. Properties and metabolism of the aqueous cytoplasm and its boundaries. Am J Physiol 1984; 246:R133–R151.
Luby-Phelps K, Lanni F, Taylor DL. The submicroscopic properties of cytoplasm as a determinant of cellular function. Annu Rev Biophys Biophys Chem 1988; 17:369–396.
Hochachka PW. The metabolic implications of intracellular circulation. Proc Natl Acad Sci USA 1999; 96:12233–12239.
Verkman AS. Solute and macromolecule diffusion in cellular aqueous compartments. Trends Biochem Sci 2002; 27:27–33.
Spitzer JJ, Poolman B. Electrochemical structure of the crowded cytoplasm. Trends Biochem Sci 2005; 30:536–541.
Csermely P. A nonconventional role of molecular chaperones: Involvement in the cytoarchitecture. News Physiol Sci 2001; 16:123–126.
Sreedhar AS, Mihaly K, Pato B et al. Hsp90 inhibition accelerates cell lysis. Anti-Hsp90 ribozyme reveals a complex mechanism of Hsp90 inhibitors involving both superoxide-and Hsp90-dependent events. J Biol Chem 2003; 278:35231–35240.
Michels AA, Kanon B, Konings AW et al. Hsp70 and Hsp40 chaperone activities in the cytoplasm and the nucleus of mammalian cells. J Biol Chem 1997; 272:33283–33289.
Nollen EA, Salomons FA, Brunsting JF et al. Dynamic changes in the localization of thermally unfolded nuclear proteins associated with chaperone-dependent protection. Proc Natl Acad Sci USA 2001; 98:12038–12043.
Guo Y, Guettouche T, Fenna M et al. Evidence for a mechanism of repression of heat shock factor 1 transcriptional activity by a multichaperone complex. J Biol Chem 2001; 276:45791–45799.
Freeman BC, Yamamoto KR. Disassembly of transcriptional regulatory complexes by molecular chaperones. Science 2002; 296:2232–2235.
Rutherford SL, Lindquist S. Hsp90 as a capacitor for morphological evolution. Nature 1998; 396:336–342.
Fares MA, Ruiz-Gonzalez MX, Moya A et al. Endosymbiotic bacteria: GroEL buffers against deleterious mutations. Nature 2002; 417:398.
Queitsch C, Sangster TA, Lindquist S. Hsp90 as a capacitor of phenotypic variation. Nature 2002; 417:618–624.
Cowen LE, Lindquist S. Hsp90 potentiates the rapid evolution of new traits: Drug resistance in diverse fungi. Science 2005; 309:2185–2189.
Sollars V, Lu X, Xiao L et al. Evidence for an epigenetic mechanism by which Hsp90 acts as a capacitor for morphological evolution. Nat Genet 2003; 33:70–74.
Whitesell L, Lindquist SL. HSP90 and the chaperoning of cancer. Nat Rev Cancer 2005; 5:761–772.
Csermely P. Chaperone-overload as a possible contributor to “civilization diseases”: Atherosclerosis, cancer, diabetes. Trends Genet 2001; 17:701–704.
Nardai G, Csermely P, Söti C. Chaperone function and chaperone overload in the aged. Exp Gerontol 2002; 37:1255–1260.
Söti C, Csermely P. Chaperones and aging: Their role in neurodegeneration and other civilizational diseases. Neurochem International 2002; 41:383–389.
Papp E, Száraz P, Korcsmáros T et al. Changes of endoplasmic reticulum chaperone complexes, redox state and impaired protein disulflde reductase activity in misfolding alpha-1-antitrypsin transgenic mice. FASEB J 2006, (in press).
Bergman A, Siegal ML. Evolutionary capacitance as a general feature of complex gene networks. Nature 2003; 424:549–552.
True HL, Berlin I, Lindquist SL. Epigenetic regulation of translation reveals hidden genetic variation to produce complex traits. Nature 2004; 431:184–187.
Sangster TA, Lindquist S, Queitsch C. Under cover: Causes, effects and implications of Hsp90-mediated genetic capacitance. Bioessays 2004; 26:348–362.
Csermely P, Agoston V, Pongor S. The efficiency of multi-target drugs: The network approach might help drug design. Trends Pharmacol Sci 2005; 26:178–182.
Vigh L, Literati PN, Horvath I et al. Bimoclomol: A nontoxic, hydroxylamine derivative with stress protein-inducing activity and cytoprotective effects. Nat Med 1997; 3:1150–1154.
Bernier V, Lagace M, Bichet DG et al. Pharmacological chaperones: Potential treatment for con-formational diseases. Trends Endocrinol Metab 2004; 15:222–228.
Neckers L, Neckers K. Heat-shock protein 90 inhibitors as novel cancer chemotherapeutics-An update. Expert Opin Emerg Drugs 2005; 10:137–149.
Söti C, Nagy E, Giricz Z et al. Heat shock proteins as emerging therapeutic targets. Br J Pharmacol 2005; 146:769–780.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2007 Landes Bioscience and Springer Science+Business Media
About this chapter
Cite this chapter
Csermely, P., Söti, C., Blatch, G.L. (2007). Chaperones as Parts of Cellular Networks. In: Csermely, P., Vígh, L. (eds) Molecular Aspects of the Stress Response: Chaperones, Membranes and Networks. Advances in Experimental Medicine and Biology, vol 594. Springer, New York, NY. https://doi.org/10.1007/978-0-387-39975-1_6
Download citation
DOI: https://doi.org/10.1007/978-0-387-39975-1_6
Publisher Name: Springer, New York, NY
Print ISBN: 978-0-387-39974-4
Online ISBN: 978-0-387-39975-1
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)