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Mutation Profile of the MUT Gene in Chinese Methylmalonic Aciduria Patients

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JIMD Reports - Case and Research Reports, 2012/3

Abstract

The mut-type methylmalonic aciduria (MMA, MIM 251000) is caused by a deficiency of mitochondrial methylmalonyl-CoA mutase (MCM, E.C. 5.4.99.2) activity, which results from defects in the MUT gene. To elucidate the mutation spectrum of the MUT gene in Chinese MMA patients, 13 exons of the MUT gene, including untranslated regions, were analyzed by PCR-based sequencing for 42 unrelated Chinese MMA patients. All the 42 patients were found to have at least one MUT mutation. A total of 41 mutations were identified. Of these mutations, 20 were novel ones, including one nonsense mutation (c.103C>T), 12 missense mutations (c.316A>C, c.424A>G, c.494A>G, c.554C>T, c.599T>C, c.919T>C, c.1009T>C, c.1061C>T, c.1141G>A, c.1208G>A, c.1267G>A, and c.1295A>C), one duplication (c.755dupA), three small deletions (c.398_399delGA, c.1046_1058del, and c.1835delG), two mutations that might affect mRNA splicing (c.754-1G>A and c.1084-10A>G), and one major deletion. Among the mutations identified, the c.1280G>A (15.5%), c.729_730insTT (10.7%), c.1106G>A (4.8%), c.1630_1631GG>TA (4.8%), and c.2080C>T (4.8%) accounted for 40% of the diseased alleles. The c.1280G>A and c.729_730insTT mutations were found to be the most frequent mutations in Southern and Northern Chinese, respectively. The results of microsatellite analysis suggest that the spread of c.729_730insTT among the Northern Chinese and of c.1280G>A and c.1630_1631GG>TA among the Southern Chinese may have undergone founder effects. This mutation analysis of the gene responsible for mut-type MMA will help to provide a molecular diagnostic aid for differential diagnosis of MMA and could be applied for carrier detection and prenatal diagnosis among Chinese family at risk of mut-type MMA.

Competing interests: None declared

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Abbreviations

MCM:

Methylmalonyl-CoA mutase

MMA:

Methylmalonic aciduria

References

  • Cartegni L, Wang J, Zhu Z, Zhang MQ, Krainer AR (2003) ESE finder: a web resource to identify exonic splicing enhancers. Nucleic Acids Res 31:3568–3571

    Article  PubMed  CAS  Google Scholar 

  • Champattanachai V, Ketudat Cairns JR, Shotelersuk V, Keeratichamroen S, Sawangareetrakul P, Srisomsap C, Kaewpaluek V, Svasti J (2003) Novel mutations in a Thai patient with methylmalonic acidemia. Mol Genet Metab 79:300–302

    Article  PubMed  CAS  Google Scholar 

  • Cooper DN, Youssoufian H (1988) The CpG dinucleotide and human genetic disease. Hum Genet 78:151–155

    Article  PubMed  CAS  Google Scholar 

  • Crane AM, Ledley FD (1994) Clustering of mutations in methylmalonyl CoA mutase associated with mut- methylmalonic acidemia. Am J Hum Genet 55: 42–50

    Google Scholar 

  • den Dunnen JT, Antonarakis SE (2000) Mutation nomenclature extensions and suggestions to describe complex mutations: a discussion. Hum Mutat 15:7–12

    Article  Google Scholar 

  • Fowler B, Leonard JV, Baumgartner MR (2008) Causes of and diagnostic approach to methylmalonic acidurias. J Inherit Metab Dis 31:350–360

    Article  PubMed  CAS  Google Scholar 

  • Gordon D, Abajian C, Green P (1998) Consed: a graphical tool for sequence finishing. Genome Res 8:195–202

    PubMed  CAS  Google Scholar 

  • Hong CJ, Song HL, Lai HC, Tsai SJ, Hsiao KJ (1999) Methanol/acetone treatment helps the amplification of FMR1 CGG repeat fragment in dried blood spots from Guthrie cards. Lancet 353:1153–1154

    Article  PubMed  CAS  Google Scholar 

  • Hori D, Hasegawa Y, Kimura M, Yang Y, Verma IC, Yamaguchi S (2005) Clinical onset and prognosis of Asian children with organic acidemias, as detected by analysis of urinary organic acids using GC/MS, instead of mass screening. Brain Dev 27:39–45

    Article  PubMed  Google Scholar 

  • Horster F, Hoffmann GF (2004) Pathophysiology, diagnosis, and treatment of methylmalonic aciduria-recent advances and new challenges. Pediatr Nephrol 19:1071–1074

    Article  PubMed  Google Scholar 

  • Janata J, Kogekar N, Fenton WA (1997) Expression and kinetic characterization of methylmalonyl-CoA mutase from patients with the mut- phenotype: evidence for naturally occurring interallelic complementation. Hum Mol Genet 6:1457–1464

    Article  PubMed  CAS  Google Scholar 

  • Kikuchi M, Hanamizu H, Narisawa K, Tada K (1989) Assay of methylmalonyl CoA mutase with high-performance liquid chromatography. Clin Chim Acta 184:307–313

    Article  PubMed  CAS  Google Scholar 

  • Lempp TJ, Suormala T, Siegenthaler R, Baumgartner ER, Fowler B, Steinmann B, Baumgartner MR (2007) Mutation and biochemical analysis of 19 probands with mut0 and 13 with mut- methylmalonic aciduria: identification of seven novel mutations. Mol Genet Metab 90:284–290

    Article  PubMed  CAS  Google Scholar 

  • Liu TT, Hsiao KJ, Lu SF, Wu SJ, Wu KF, Chiang SH, Liu XQ, Chen RG, Yu WM (1998) Mutation analysis of the 6-pyruvoyl-tetrahydropterin synthase gene in Chinese hyperphenylalaninemia caused by tetrahydrobiopterin synthesis deficiency. Hum Mutat 11:76–83

    Article  PubMed  CAS  Google Scholar 

  • Merinero B, Perez B, Perez-Cerda C, Rincon A, Desviat LR, Martinez MA, Sala PR, Garcia MJ, Aldamiz-Echevarria L, Campos J, Cornejo V, Del Toro M, Mahfoud A, Martinez-Pardo M, Parini R, Pedron C, Pena-Quintana L, Perez M, Pourfarzam M, Ugarte M (2008) Methylmalonic acidaemia: examination of genotype and biochemical data in 32 patients belonging to mut, cblA or cblB complementation group. J Inherit Metab Dis 31:55–66

    Article  PubMed  CAS  Google Scholar 

  • Nickerson DA, Tobe VO, Taylor SL (1997) PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing. Nucleic Acids Res 25:2745–2751

    Article  PubMed  CAS  Google Scholar 

  • Niu DM, Chien YH, Chiang CC, Ho HC, Hwu WL, Kao SM, Chiang SH, Kao CH, Liu TT, Chiang H, Hsiao KJ (2010) Nationwide survey of extended newborn screening by tandem mass spectrometry in Taiwan. J Inherit Metab Dis 33:S295–S305

    Article  PubMed  Google Scholar 

  • Perez B, Rincon A, Jorge-Finnigan A, Richard E, Merinero B, Ugarte M, Desviat LR (2009) Pseudoexon exclusion by antisense therapy in methylmalonic aciduria (MMAuria). Hum Mutat 30(12):1676–1682

    Article  PubMed  CAS  Google Scholar 

  • Rincon A, Aguado C, Desviat LR, Sanchez-Alcudia R, Ugarte M, Perez B (2007) Propionic and methylmalonic acidemia: antisense therapeutics for intronic variations causing aberrantly spliced messenger RNA. Am J Hum Genet 81:1262–1270

    Article  PubMed  CAS  Google Scholar 

  • Rosenblatt DS, Aspler AL, Shevell MI, Pletcher BA, Fenton WA, Seashore MR (1997) Clinical heterogeneity and prognosis in combined methylmalonic aciduria and homocystinuria (cblC). J Inherit Metab Dis 20:528–538

    Article  PubMed  CAS  Google Scholar 

  • Worgan LC, Niles K, Tirone JC, Hofmann A, Verner A, Sammak A, Kucic T, Lepage P, Rosenblatt DS (2006) Spectrum of mutations in mut methylmalonic acidemia and identification of a common Hispanic mutation and haplotype. Hum Mutat 27:31–43

    Article  PubMed  CAS  Google Scholar 

  • Zwickler T, Lindner M, Aydin HI, Baumgartner MR, Bodamer OA, Burlina AB, Das AM, DeKlerk JB, Gokcay G, Grunewald S, Guffon N, Maier EM, Morava E, Geb S, Schwahn B, Walter JH, Wendel U, Wijburg FA, Muller E, Kolker S, Horster F (2008) Diagnostic work-up and management of patients with isolated methylmalonic acidurias in European metabolic centres. J Inherit Metab Dis 31:361–367

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

The authors thank Sequencing Core of Genome Research Center of National Yang-Ming University for sequencing works and Dr. S.-F. Tsai for discussion and various helpful suggestions. This study was partially supported by the National Health Research Institutes and, in part, by grants from the National Science Council (NSC92-2320-B-010-076) and the Bureau of Health Promotion, Department of Health (DOH94-HP-2204 and DOH95-HP-2206), Taiwan, Republic of China.

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Correspondence to Kwang-Jen Hsiao .

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Communicated by: Ivo Baric

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Appendices

Contribution of Individual Authors

Author

Contributions

Mei-Ying Liu

Plan, conduct, and prepare this manuscript

Tze-Tze Liu

Plan, supervise, discuss, and prepare this manuscript

Yan-Ling Yang

Clinical diagnosis and collection of clinical information

Shu-Fen Lee

Conduct experiments

Yu-Ting Teng

Conduct experiments

Ying-Chen Chang

Conduct the molecular genetics study

Ya-Ling Fan

Biochemical and enzymatic studies

Szu-Hui Chiang

Collection of information

Dau-Ming Niu

Clinical diagnosis and collection of clinical information

Shio-Jean Lin

Clinical diagnosis and collection of clinical information

Mei-Chun Chao

Clinical diagnosis and collection of clinical information

Shuan-Pei Lin

Clinical diagnosis and collection of clinical information

Lian-Shu Han

Clinical diagnosis and collection of clinical information

Yu Qi

Collection and establishment of cell lines

Kwang-Jen Hsiao*

Plan, supervise, discussion, and prepare this manuscript

Statement of Competing Interest

The authors have nothing to declare.

Details of the Ethics Approval

Partial patients were retrospectively studied. This study was approved by the Ethics Committee of the Taipei Veterans General Hospital.

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Liu, MY. et al. (2012). Mutation Profile of the MUT Gene in Chinese Methylmalonic Aciduria Patients. In: JIMD Reports - Case and Research Reports, 2012/3. JIMD Reports, vol 6. Springer, Berlin, Heidelberg. https://doi.org/10.1007/8904_2011_117

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  • DOI: https://doi.org/10.1007/8904_2011_117

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