Abstract
The utilization of antibiotics to control infectious diseases is one of the biggest advances in human and veterinary health care. However, the generalized use of antibiotics has been accompanied by a worrisome increase in the prevalence of antibiotic-resistant bacteria. This evidence motivated numerous studies on the diversity and distribution of antibiotic-resistant bacteria and resistance genetic determinants not only in clinic but also in different environmental compartments. Given the particular importance that the anthropic water cycle (waste water/surface water/drinking water) may have in the development and dissemination of antibiotic-resistant organisms, this chapter aims at summarizing the recent advances in this area. Sections 1 and 2 are an Introduction to antibiotic resistance, summarizing some mechanisms and modes of resistance acquisition. In Sect. 3, the contribution of the environmental pollution and other anthropic pressures for antibiotic resistance evolution is discussed. The use of different methodologies and the limitations to achieve general conclusions on the characterization and quantification of antibiotic resistance in aquatic environments are examined in Sects. 4 and 7. Sections 5–7 summarize recent evidences on the widespread distribution of antibiotic resistance in different compartments of the anthropic water cycle. The scarcity of studies giving evidences on the direct effect of anthropic pressures on antibiotic resistance acquisition and maintenance in treated waste/drinking waters is highlighted. The contribution of bacterial community rearrangement, imposed by water treatment processes, on the increase of antibiotic resistance is discussed.
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Abbreviations
- 16S rRNA:
-
16S small subunit ribosomal RNA
- 30S:
-
Small subunit of the 70S ribosome of prokaryotes
- 50S:
-
Large subunit of the 70S ribosome of prokaryotes
- A:
-
Aminoglycosides
- aac(3)-I:
-
Genes encoding 3-N-aminoglycoside acetyltransferases; confer resistance to aminoglycosides
- aac(6′)-Ib-cr:
-
Gene encoding an aminoglycoside acetyltransferase; confers reduced susceptibility to ciprofloxacin and norfloxacin
- aadA:
-
Genes encoding aminoglycoside-3″-adenylyltransferases (AAD); confer resistance to streptomycin and spectinomycin
- AIA:
-
Antibiotic impregnated agar
- ampC:
-
Gene encoding chromosomal β-lactamase; confers resistance to β-lactams
- Ap:
-
Amphenicol
- AP:
-
Ampicillin
- aphA:
-
Gene encoding acid phosphatase/phosphotransferase; confers resistance to aminoglycosides
- APUA:
-
Alliance for the Prudent Use of Antibiotics
- AVn :
-
Average values of n plants
- AX:
-
Amoxicillin
- bla (TEM,CTX-M/GES/OXA/PER/SHV/TLA/VEB) :
-
Genes encoding extended spectrum β-lactamases; confer resistance to β-lactams
- bla NDM-1 :
-
Gene encoding for the New Delhi metallo-β-lactamase-1; confers resistance to almost all β-lactams
- BSAC:
-
British Society for Antimicrobial Chemotherapy
- C:
-
Ciprofloxacin
- CA-SFM:
-
Antibiogram Committee of the French Society for Microbiology
- cat :
-
Genes encoding chloramphenicol acetyltransferases; confer resistance to chloramphenicol
- CDC:
-
Centres for Disease Control and Prevention
- CFU:
-
Colony forming units
- CLSI:
-
Clinical and Laboratory Standards Institute
- cmr :
-
Gene encoding a putative efflux pump; confers resistance to chloramphenicol
- COST:
-
European Cooperation in Science and Technology
- DANMAP:
-
The Danish Integrated Antimicrobial Resistance Monitoring and Research programme
- DARE:
-
Detecting evolutionary hot spots of antibiotic resistance in Europe
- DDM:
-
Disc diffusion method
- dfr :
-
Genes encoding dihydrofolate reductases; confers resistance to trimethoprim
- DGGE:
-
Denaturating gradient gel electrophoresis
- DNA:
-
Deoxyribonucleic acid
- EARS-Net:
-
European Antimicrobial Resistance Surveillance Network
- ECDC:
-
European Centre for Disease Prevention and Control
- ECOFF:
-
Epidemiological cut-off values
- erm(A/E):
-
Genes encoding rRNA methylase; confers resistance to erythromycin
- erm(B/C/F):
-
Genes encoding rRNA methylases; confer cross-resistance to macrolides, lincosamides and streptogramin B
- ESAC:
-
European Surveillance of Antimicrobial Consumption
- EUCAST:
-
European Committee on Antimicrobial Susceptibility Testing
- FE:
-
Final effluent
- floR:
-
Gene encoding an exporter protein that specifically exports amphenicol antibiotics
- G:
-
Glycopeptides
- gyrA:
-
Gene encoding DNA gyrase subunit A; gene mutation confers resistance to ciprofloxacin
- L:
-
β-lactam
- M:
-
Macrolide
- MD:
-
Microdilution method
- mecA:
-
Gene encoding penicillin binding protein 2; confers resistance to penicillins
- MMPN:
-
Modified most probable number
- msrA:
-
Gene encoding methionine sulfoxide reductase A; confers resistance to erythromycin
- n.a.:
-
Not available
- NA:
-
Nalidixic acid
- NARMS/USA:
-
National Antimicrobial Resistance Monitoring System (United States of America)
- parC:
-
Gene encoding DNA topoisomerase IV subunit A; gene mutation confers resistance to quinolone
- PCR:
-
Polymerase chain reaction
- Q:
-
Quinolone
- qac :
-
Gene encoding multidrug transporters
- qepA :
-
Gene encoding an efflux pump; confers resistance to fluoroquinolone
- qnr :
-
Genes encoding Qnr proteins, capable of protecting DNA gyrase; confer resistance to quinolone
- qPCR:
-
Quantitative real time polymerase chain reaction
- RNA:
-
Ribonucleic acid
- RVn :
-
Range values for n plants
- S:
-
Sulfonamide
- sat(1–2) :
-
Genes encoding a nourseothricin N-acetyltransferase; confer resistance to aminoglycosides
- str :
-
Genes encoding phosphotransferases; confer resistance to streptomycin
- sul(I–II):
-
Genes encoding a drug-resistant dihydropteroate synthase enzyme required for folate biosynthesis; confer resistance to sulfonamide
- T:
-
Tetracycline
- tet(A–D/K/L/Y):
-
Genes encoding efflux pumps; confer resistance to tetracyclines
- tet(M/O/Q/W):
-
Genes encoding proteins protecting the ribosome from the inhibiting effects of tetracycline
- tetR:
-
Gene encoding a repressor protein, which regulates the tetracycline efflux system genes
- Ts:
-
Trimethoprim
- TT:
-
Tertiary treatment implemented
- van :
-
Genes encoding d-alanine:d-alanine ligases with a broad substrate specificity; confer inducible resistance to the glycopeptides antibiotics, as vancomycin
- WHO:
-
World Health Organization
- WT:
-
Wild-type
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Manaia, C.M., Vaz-Moreira, I., Nunes, O.C. (2011). Antibiotic Resistance in Waste Water and Surface Water and Human Health Implications. In: Barceló, D. (eds) Emerging Organic Contaminants and Human Health. The Handbook of Environmental Chemistry(), vol 20. Springer, Berlin, Heidelberg. https://doi.org/10.1007/698_2011_118
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