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Identification of Mycobacterium Species by MALDI-TOF Mass Spectrometry

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Book cover Pulmonary Care and Clinical Medicine

Part of the book series: Advances in Experimental Medicine and Biology ((NR,volume 1021))

Abstract

Matrix-assisted laser desorption ionization – time-of-flight (MALDI-TOF) mass spectrometry enables to identify microorganisms by comparison of the protein content with reference spectra in the database. The aim of this study was to evaluate the efficacy of phenotypic identification of mycobacteria by MALDI-TOF mass spectrometry in laboratory practice. Seventy five isolates of mycobacteria were identified by molecular and phenotypic method, and the results were compared by MALDI-TOF. For MALDI-TOF, material was processed according to the Bruker Daltonics protocol and Mycobacterial Library database version 2.0, with 313 reference mycobacteria spectra. All except one of the 72 isolates agreed with regard to the species and genus by both methods. Forty three isolates were identified as the M. tuberculosis complex by MALDI-TOF. Thirty one isolates of nontuberculous mycobacteria were consistently identified by both methods to the species level. We conclude that MALDI-TOF mass spectrometry is an accurate method of bacterial identification. Simplicity, speed, and economic availability of the method makes it suitable for mycobacteria identification in a routine laboratory.

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References

  • Alcaide F, Palop-Borrás B, Domingo D, Tudó G (2016) Application of mass spectrometry in mycobacteria. Enferm Infecc Microbiol Clin 34:31–35

    Article  PubMed  Google Scholar 

  • Balada-Llasat JM, Kamboj K, Pancholi P (2013) Identification of mycobacteria from solid and liquid media by matrix-assisted laser desorption ionization–time of flight mass spectrometry in the clinical laboratory. J Clin Microbiol 51:2875–2879

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Benagli C, Rossi V, Dolina M, Tonolla M, Petrini O (2011) Matrix-assisted laser desorption ionization-time of flight mass spectrometry for the identification of clinically relevant bacteria. PLoS One 6:e16424

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Biswas S, Rolain JM (2013) Use of MALDI-TOF mass spectrometry for identification of bacteria that are difficult to culture. J Microbiol Methods 92:14–24

    Article  CAS  PubMed  Google Scholar 

  • Clark AE, Kaleta EJ, Arora A, Wolk DM (2013) Matrix-assisted laser desorption ionization-time of flight mass spectrometry: a fundamental shift in the routine practice of clinical microbiology. Clin Microbiol Rev 26(3):547–603

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Croxatto A, Proďhom G, Greub G (2012) Applications of MALDI-TOF mass spectrometry in clinical diagnostic microbiology. FEMS Microbiol Rev 36:380–407

    Article  CAS  PubMed  Google Scholar 

  • Dixon P, Davies P, Hollingworth W, Stoddart M, MacGowan A (2015) A systematic review of matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry compared to routine microbiological methods for the time taken to identify microbial organisms from positive blood cultures. Eur J Clin Microbiol Infect Dis 34:863–876

    Article  CAS  PubMed  Google Scholar 

  • Griffith DE, Aksamit T, Brown-Elliot BA, Catanzaro A, Daley C, Gordin F, Holland SM, Horsburgh R, Huitt G, Iademarco MF, Iseman M, Olivier K, Ruoss S, von Reyn CF, Wallace RJ Jr, Winthrop K, ATS Mycobacterial Diseases Subcommittee; American Thoracic Society; Infectious Disease Society of America (2007) An official ATS/IDSA statement: diagnosis, treatment, and prevention of nontuberculous mycobacterial disease. Am J Respir Crit Care Med 175:367–416

    Article  CAS  PubMed  Google Scholar 

  • Jarzembowski JA, Young MB (2008) Nontuberculous mycobacterial infections. Arch Pathol Lab Med 132:1333–1341

    PubMed  Google Scholar 

  • Kehrmann J, Wessel S, Murali R, Hampel A, Bange FC, Buer J, Mosel F (2016) Principal component analysis of MALDI TOF MS mass spectra separates M. abscessus (sensu stricto) from M. massiliense isolates. BMC Microbiol 16:24

    Article  PubMed  PubMed Central  Google Scholar 

  • Pranada AB, Timke M, Witt E, Kostrzewa M (2015) Mycobacteria identification by MALDI Biotyper System: evolution of database content and evaluation criteria. 25th ECCMID, Copenhagen, Poster 1190; https://www.escmid.org/escmid_publications/escmid_elibrary/material/?mid=29197. Accessed 18 Oct 2016

  • Quinlan P, Phelan E, Doyle M (2015) Matrix-assisted laser desorption/ionisation time-of-flight (MALDI-TOF) mass spectrometry (MS) for the identification of mycobacteria from MBBacT ALERT 3D liquid cultures and Lowenstein-Jensen (LJ) solid cultures. J Clin Pathol 68:229–235

    Article  CAS  PubMed  Google Scholar 

  • Saleeb PG, Drake SK, Murray PR, Zelazny AM (2011) Identification of mycobacteria in solid-culture media by matrix-assisted laser desorption ionization-time of flight mass spectrometry. J Clin Microbiol 49:1790–1794

    Article  PubMed  PubMed Central  Google Scholar 

  • Şamlı A, İlki A (2016) Comparison of MALDI-TOF MS, nucleic acid hybridization and the MPT64 immunochromatographic test for the identification of M. tuberculosis and non-tuberculosis Mycobacterium species. New Microbiol 39(4):259–263

    PubMed  Google Scholar 

  • Tonolla M, Benagli C, Rossi V, Fragoso C, Petrini O (2010) MALDI-TOF MS: a new laboratory option for the diagnosis of clinical infections. Pipette 3:6–10

    Google Scholar 

  • Zumla A, Raviglione M, Hafner R, von Reyn CF (2013) Tuberculosis. N Engl J Med 368:745–755

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

Supported by project KEGA 032UK-4/2015 – Modern Education for Knowledge Society of the Ministry of Education, Slovak Republic.

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The authors declare no conflicts of interest in relation to this article.

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Correspondence to E. Novakova .

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Neuschlova, M., Vladarova, M., Kompanikova, J., Sadlonova, V., Novakova, E. (2017). Identification of Mycobacterium Species by MALDI-TOF Mass Spectrometry. In: Pokorski, M. (eds) Pulmonary Care and Clinical Medicine. Advances in Experimental Medicine and Biology(), vol 1021. Springer, Cham. https://doi.org/10.1007/5584_2017_26

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