Skip to main content

Managing Complex Knowledge in Natural Sciences

  • Conference paper
  • First Online:
Case-Based Reasoning Research and Development (ICCBR 1999)

Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 1650))

Included in the following conference series:

Abstract

In many fields dependant upon complex observation, the structuring, depiction and treatment of knowledge can be of great complexity. For example in Systematics, the scientific discipline that investigates bio-diversity, the descriptions of specimens are often highly structured (composite objects, taxonomic attributes), noisy (erroneous or unknown data), and polymorphous (variable or imprecise data). In this paper, we present IKBS, an Iterative Knowledge Base System for dealing with such complex phenomena. The originality of this system is to implement the scientific method in biology: experimenting (learning rules from examples) and testing (identifying new individuals, improving the initial model and descriptions). This methodology is applied in the following ways in IKBS: 1 - Knowledge is acquired through a descriptive model that suits the semantic demand of experts. 2 - Knowledge is processed with an algorithm derived from C4.5 in order to take into account structured knowledge introduced in the previous descriptive model of the domain. 3 - Knowledge is refined through the use of an iterative process to evaluate the robustness of the descriptive model and descriptions. The IKBS system is presented here as a life science application facilitating the identification of coral specimens of the family Pocilloporidæ.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Aamodt A., Plaza E., Case-Based Reasoning: Foundational Issues, Methodological Variations, and System Approaches, AI Communications 7(1): 39–59, 1994.

    Google Scholar 

  2. Allkin R., Handling taxonomic descriptions by computer, In; Allkin R. and Bisby F.A. (eds.), Databases in Systematics. Systematics Association London, Academic Press, 26: 263–278, 1984.

    Google Scholar 

  3. . Althoff K.D., Auriol E., Barletta R., Manago M., A review of Industrial Case-Based Reasoning Tools, AI Intelligence, Oxford, 1995.

    Google Scholar 

  4. . Conruyt N., Grosser D., Faure G. FrIngénierie des connaissances en Sciences de la vie: application à la systématique des coraux des Mascareignes. Journées Ingénierie des Connaissances et Apprentissage Automatique (JICAA’97), Roscoff, pages 539–566, 1997.

    Google Scholar 

  5. . Dallwitz M.J., Paine T.A., Zurcher E.J., User’s guide to the DELTA System. A general system for processing taxonomic descriptions, Canberra: CSIRO, Div. Entomol., 4th ed., 1993.

    Google Scholar 

  6. Diederich J.R., Milton J., Creating domain specific metadata for scientific data and knowledge bases, IEEE Trans., Knowledge Data Engineering 3(4): 421–434, 1991.

    Article  Google Scholar 

  7. . Faure G., Recherche sur les peuplements de scléractiniaires des récifs coralliens des Mascareignes. Thèse es sciences, Univ Aix-Marseille II, 1982.

    Google Scholar 

  8. Fayyad U., Piatetsky-Shapiro G., Padhraic S., From Data Mining to Knowledge Discovery in Databases, AI magazine, 17(3): 37–54, Fall 1996.

    Google Scholar 

  9. . Kodratoff Y. L’extraction de connaissances à partir des données. Journées Ingénierie des Connaissances et Apprentissage Automatique (JICAA’97), Roscoff, pages 539–566, 1997.

    Google Scholar 

  10. Lebbe J., Systématique et informatique. Systématique et biodiversité, Bourgoin T. (Ed), Biosystema, 13:71–79, Paris, 1995.

    Google Scholar 

  11. Le Renard J., Conruyt N. On the representation of observational data used for classification and identification of natural objects. IFCS’93, Lecture notes in Artificial Intelligence, Springer-Verlag, pages 308–315, 1994.

    Google Scholar 

  12. Manago M., Conruyt N. Using Information Technology to Solve Real World Problems, Lecture Notes in Computer Science subseries, 622: 22–37, Springer Verlag, 1992.

    Google Scholar 

  13. Manago M., Althoff K.D., Auriol E., Traphoner R., Wess S., Conruyt N., Maurer F., Induction and reasoning from cases, First European workshop on case-based reasoning (EWCBR-93), MM Richter, S Wess, KD Althoff and F Maurer (Eds.), Springer Verlag, (2), 1993.

    Google Scholar 

  14. Mingers J. Expert Systems-Rule induction with statistical data. Journal of the operational research society. 38(1): 39–47, 1987.

    Article  Google Scholar 

  15. Pankhurst R.J., Practical taxonomic computing. Cambridge Univ. Press, Cambridge, 1991.

    Google Scholar 

  16. Popper K.R., La logique de la découverte scientifique. Payot (Eds.) Press, Paris, 1973.

    Google Scholar 

  17. Quinlan J.R., C4.5: Programs for Machine Learning, Morgan Kaufmann, Los Altos, CA, 1993.

    Google Scholar 

  18. Veron J.E.N., Pichon M., Scleractinia of eastern Australia, vol. I, Part I, Australian Institute of Marine Science Monograph Series, 1976.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 1999 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Conruyt, N., Grosser, D. (1999). Managing Complex Knowledge in Natural Sciences. In: Althoff, KD., Bergmann, R., Branting, L. (eds) Case-Based Reasoning Research and Development. ICCBR 1999. Lecture Notes in Computer Science, vol 1650. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-48508-2_29

Download citation

  • DOI: https://doi.org/10.1007/3-540-48508-2_29

  • Published:

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-66237-2

  • Online ISBN: 978-3-540-48508-7

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics