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Approximating the Expected Number of Inversions Given the Number of Breakpoints

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Book cover Algorithms in Bioinformatics (WABI 2002)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 2452))

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Abstract

We look at a problem with motivation from computational biology: Given the number of breakpoints in a permutation (representing a gene sequence), compute the expected number of inversions that have occurred. For this problem, we obtain an analytic approximation that is correct within a percent or two. For the inverse problem, computing the expected number of breakpoints after any number of inversions, we obtain an analytic approximation with an error of less than a hundredth of a breakpoint.

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© 2002 Springer-Verlag Berlin Heidelberg

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Eriksen, N. (2002). Approximating the Expected Number of Inversions Given the Number of Breakpoints. In: Guigó, R., Gusfield, D. (eds) Algorithms in Bioinformatics. WABI 2002. Lecture Notes in Computer Science, vol 2452. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-45784-4_24

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  • DOI: https://doi.org/10.1007/3-540-45784-4_24

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  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-44211-0

  • Online ISBN: 978-3-540-45784-8

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