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Exact and Efficient Computation of the Expected Number of Missing and Common Words in Random Texts

  • Sven Rahmann
  • Eric Rivals
Conference paper
Part of the Lecture Notes in Computer Science book series (LNCS, volume 1848)

Abstract

The number of missing words (NMW) of length q in a text, and the number of common words (NCW) of two texts are useful text statistics. Knowing the distribution of the NMW in a random text is essential for the construction of so-called monkey tests for pseudorandom number generators. Knowledge of the distribution of the NCW of two independent random texts is useful for the average case analysis of a family of fast pattern matching algorithms, namely those which use a technique called q-gram filtration. Despite these important applications, we are not aware of any exact studies of these text statistics. We propose an efficient method to compute their expected values exactly. The difficulty of the computation lies in the strong dependence of successive words, as they overlap by (q - 1) characters. Our method is based on the enumeration of all string autocorrelations of length q, i.e., of the ways a word of length q can overlap itself. For this, we present the first efficient algorithm. Furthermore, by assuming the words are independent, we obtain very simple approximation formulas, which are shown to be surprisingly good when compared to the exact values.

Keywords

Common Word Exponential Approximation Alphabet Size Random Text Monkey Test 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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Copyright information

© Springer-Verlag Berlin Heidelberg 2000

Authors and Affiliations

  • Sven Rahmann
    • 1
  • Eric Rivals
    • 2
  1. 1.Theoretische Bioinformatik (TBI), Deutsches Krebsforschungszentrum (DKFZ)HeidelbergGermany
  2. 2.L.I.R.M.MMontpellier Cedex 5France

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