Skip to main content

Genetic Algorithms and Biological Images Restoration: Preliminary Report

  • Conference paper
  • First Online:
Advances in Artificial Intelligence — IBERAMIA 2002 (IBERAMIA 2002)

Part of the book series: Lecture Notes in Computer Science ((LNAI,volume 2527))

Included in the following conference series:

Abstract

The purpose of this work is to investigate the application of genetic algorithms [9] on biological images restoration. The idea is to improve images quality generated by Atomic Force Microscopy (AFM) technique [1] and by Cidade et al. [3] restoration method in a way that they can be used to analyze the structures of a given biological sample.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Binnig, G., Quate, C. F., Gerber, C. H.; Atomic Force Microscope; Phys. Rev. Lett. 56(9), 930–933 (1986)

    Article  Google Scholar 

  2. Chacón, P.; Morán, F.; Díaz, J. F.; Pantos, E. and Andreu, J. M.; Low-Resolution Structures of Proteins in Solution Retrieved from X-Ray Scattering with a Genetic Algorithm; Biophysical Journal, Volume 74 June (1998)

    Google Scholar 

  3. Cidade, G.A.G., Roberty, N. C., Silva Neto, A. J. e Bisch, P. M.; The Restoration of AFM Biological Images Using the Tikhonov’s Method-the Proposal of a General Regularization Functional for Best Contrast Results, Acta Micr., v. 10, pp.157–161 (2001)

    Google Scholar 

  4. Dandekar, T., and P. Argos; Folding the main chain of small proteins with the genetic algorithm; J. Mol. Biol. 236:844–861 (1994)

    Article  Google Scholar 

  5. Dandekar, T.; Improving Protein Structure Prediction by New Strategies: Experimental Insights and the Genetic Algorithm; (1997)

    Google Scholar 

  6. Goldberg, David E.; Genetic Algorithms in Search, Optimization and Machine Learning; Addison-Wesley (1989)

    Google Scholar 

  7. Goldberg, David E.; A Note on Boltzmann Tournament Selection for Genetic Algorithms and Population-Oriented Simulated Annealing; C. Sys. 4, 445–460 (1990)

    MATH  Google Scholar 

  8. Gultyaev, A. P., F. H. D. van Batenburg, and C. W. A. Pleij; The computer simulation of RNA folding pathways using a genetic algorithm; J. Mol. Biol. 250:37–51 (

    Article  Google Scholar 

  9. Holland, John. H.; Adaptation In Natural and Artificial Systems; Ann Arbor, Michigan: The University of Michigan Press (1975)

    Google Scholar 

  10. Jiang, Tianzi and Evans, D. J.; Image Restoration by Combining Local Genetic Algorithm with Adaptive Pre-Conditioning; In. Jap. Comp. Math., v. 76, 279–295 (2001)

    Article  MathSciNet  Google Scholar 

  11. Kress, R., Applied Mathematical Sciences, 82, Springer Verlag (1989)

    Google Scholar 

  12. Li, Xiaodong, Jiang, Tianzi and Evans, D. J.; Medical Image Reconstruction using a Multi-Objective Genetic Local Search Algorithm; International Japanese Computer Math., Vol 74, 301–314 (2000)

    Article  MATH  Google Scholar 

  13. Mahfoud, Samir W.; An Analysis of Boltzmann Tournament Selection; Department of Computer Science, University of Illinois (1994)

    Google Scholar 

  14. May, Kaaren; Stathaki, Tania; Constantinides, Anthony; A Simulated Annealing Genetic Algorithm for Blind Deconvolution of Nonlinearly Degraded Images; Signal Processing and Digital Systems Section; Imperial College of Sci., Tech. and Med. (1996)

    Google Scholar 

  15. Oei, Christopher K.; Goldberg, David E. and Chang, Shau-Jin; Tournament Selection, Niching, and the Preservation of Diversity; Illinois Genetic Algorithms Laboratory (1991)

    Google Scholar 

  16. Pelikan, Martin and Goldberg, David E.; Genetic Algorithms, Clustering, and the Breaking of Symmetry; Illinois Genetic Algorithms Laboratory, Department of General Engineering, (2000)

    Google Scholar 

  17. Rudolph, Günter.; Convergence Analysis of Canonical Genetic Algorithms; IEEE Transactions on Neural Networks, pp. 96–101, Jan (1994)

    Google Scholar 

  18. Ruggiero, M. A. G. e Lopes, V. L. da R.; Cálculo Numérico-Aspectos Teóricos e Computacionais; Makron Books (1997)

    Google Scholar 

  19. Spears, William M. and Anand, Vic; A Study of Crossover Operators in Genetic Programming; Navy Center for App. Res. in AI amp The Mass. Ins. of Tech. (1991)

    Google Scholar 

  20. Spears, William M.; Crossover or Mutation?; Navy Center for Applied Research in Artificial Intelligence, Naval Research Laboratory, Washington, D.C. (1992)

    Google Scholar 

  21. Tanenbaum, A.S.; Computer Networks; Prentice-Hall, Inc. (1996)

    Google Scholar 

  22. Tikhonov, A.N. and Arsenin, V.Y.;Solutions of Ill-Posed Problems,Wiley, N. Y. (1977)

    MATH  Google Scholar 

  23. Thierens, Dirk; Scalability Problems of Simple Genetic Algorithms; Department of Computer Science, Utrecht University, Netherlands (1999)

    Google Scholar 

  24. Weisman et all, Application of morphological pseudoconvolutions to scanningtunneling and atomic force microscopy, SPIE Proc., V. 1567, App. of Digital Image Proc. XIV, 1991, pp.88–90

    Google Scholar 

  25. Willet, P; Genetic algorithms in molecular recognition and design;Trends Biol. 13: 516–521 (1995)

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2002 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Ribeiro, S.J.M., da Silva, J.C.P. (2002). Genetic Algorithms and Biological Images Restoration: Preliminary Report. In: Garijo, F.J., Riquelme, J.C., Toro, M. (eds) Advances in Artificial Intelligence — IBERAMIA 2002. IBERAMIA 2002. Lecture Notes in Computer Science(), vol 2527. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-36131-6_35

Download citation

  • DOI: https://doi.org/10.1007/3-540-36131-6_35

  • Published:

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-00131-7

  • Online ISBN: 978-3-540-36131-2

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics