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Antibacterial Peptidomimetics: Polymeric Synthetic Mimics of Antimicrobial Peptides

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Polymer Composites – Polyolefin Fractionation – Polymeric Peptidomimetics – Collagens

Part of the book series: Advances in Polymer Science ((POLYMER,volume 251))

Abstract

Polymer-based peptidomimetics, or proteinomimetics, are a relatively young and dynamic field of research. The ability to successfully mimic the biochemical activity of antimicrobial peptides (AMPs) has been demonstrated by several groups. This has been accomplished by careful tuning of the molecule’s hydrophobicity and charge density. At the same time, many important questions remain to be answered, including the role of backbone rigidity, details of membrane insertion, and the role of curvature in the self-assemblies between these novel peptidemimetics and phospholipids. As the biological properties of polymeric synthetic mimics of AMPs (SMAMPs) result from the interplay of many parameters, it is not yet possible to predict the exact properties of such molecules from their mere chemical structure. However, as demonstrated here, the effect of certain design features such as charge and hydrophobicity on the properties across a polymer series is understood. Compared to the mechanistic specifics that are known about the interactions of AMPs or small antibacterial molecules with membranes and cells, relatively little is known concerning the interaction of polymeric SMAMPs with membranes. Beyond SMAMPs, numerous opportunities exist and protein transduction domain mimics are an active area of research in the Tew laboratory. These two examples, one quite new and the other studied for almost a decade, demonstrate that it is possible to teach synthetic polymers to behave like peptides, despite their lack of sequence specificity and secondary structure.

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References

  1. Giannis A, Kolter T (1993) Angew Chem 105:1303

    Article  Google Scholar 

  2. Gante J (1994) Angew Chem 106:1780

    Article  Google Scholar 

  3. Gabriel GJ, Maegerlein JA, Nelson CF, Dabkowski JM, Eren T, Nusslein K, Tew GN (2009) Chem Eur J 15:433

    Article  Google Scholar 

  4. Kuroda K, DeGrado WF (2005) J Am Chem Soc 127:4128

    Article  Google Scholar 

  5. Arnt L, Nusslein K, Tew GN (2004) J Polym Sci A Polym Chem 42:3860

    Article  ADS  Google Scholar 

  6. Choi S, Isaacs A, Clements D, Liu D, Kim H, Scott RW, Winkler JD, Degrado WF (2009) Proc Natl Acad Sci USA 106:6968

    Article  ADS  Google Scholar 

  7. Sambhy V, Peterson BR, Sen A (2008) Angew Chem Int Ed 47:1250

    Article  Google Scholar 

  8. Andrews JM (2001) J Antimicrob Chemother 48:5

    Article  Google Scholar 

  9. Andrews JM (2002) J Antimicrob Chemother 49:1049

    Article  Google Scholar 

  10. Rennie J, Arnt L, Tang HZ, Nusslein K, Tew GN (2005) J Ind Microbiol Biotechnol 32:296

    Article  Google Scholar 

  11. Gabriel GJ, Madkour AE, Dabkowski JM, Nelson CF, Nusslein K, Tew GN (2008) Biomacromolecules 9:2980

    Article  Google Scholar 

  12. Coval ML (1970) J Biol Chem 245:6335

    Google Scholar 

  13. Carmody M, Murphy B, Byrne B, Power P, Rai D, Rawlings B, Caffrey P (2005) J Biol Chem 280:34420

    Article  Google Scholar 

  14. Moran AC, Martinez MA, Sineriz F (2002) Biotechnol Lett 24:177

    Article  Google Scholar 

  15. Kondejewski LH, Farmer SW, Wishart DS, Kay CM, Hancock REW, Hodges RS (1996) J Biol Chem 271:25261

    Article  Google Scholar 

  16. Mowery BP, Lee SE, Kissounko DA, Epand RF, Epand RM, Weisblum B, Stahl SS, Gellman SH (2007) J Am Chem Soc 129:15474

    Article  Google Scholar 

  17. Varkey J, Nagaraj R (2005) Antimicrob Agents Chemother 49:4561

    Article  Google Scholar 

  18. Harder J, Bartels J, Christophers E, Schroder JM (2001) J Biol Chem 276:5707

    Article  Google Scholar 

  19. Ding Y, Qin CG, Guo ZH, Niu WN, Zhang RJ, Li Y (2007) Chem Biodivers 4:2827

    Article  Google Scholar 

  20. Polymedix (2010) http://www.polymedix.com Accessed 10 May 2010

  21. Eren T, Som A, Rennie JR, Nelson CF, Urgina Y, Nusslein K, Coughlin EB, Tew GN (2008) Macromol Chem Phys 209:516

    Article  Google Scholar 

  22. Lienkamp K, Madkour AE, Musante A, Nelson CF, Nusslein K, Tew GN (2008) J Am Chem Soc 130:9836

    Article  Google Scholar 

  23. Zasloff M (2002) Nature 415:389

    Article  ADS  Google Scholar 

  24. Brogden KA (2005) Nat Rev Microbiol 3:238

    Article  Google Scholar 

  25. Zasloff M (1987) Proc Natl Acad Sci USA 84:5449

    Article  ADS  Google Scholar 

  26. de Leeuw E, Lu W (2007) Infect Disord Drug Targets 7:67

    Article  Google Scholar 

  27. Matsuzaki K, Harada M, Handa T, Funakoshi S, Fujii N, Yajima H, Miyajima K (1989) Biochim Biophys Acta Biomembr 981:130

    Article  Google Scholar 

  28. Oren Z, Shai Y (1998) Biopolymers 47:451

    Article  Google Scholar 

  29. Shai Y (1999) Biochim Biophys Acta Biomemb 1462:55

    Article  Google Scholar 

  30. Schittek B, Paulmann M, Senyuerek I, Steffen H (2008) Infect Disord Drug Targets 8:135

    Article  Google Scholar 

  31. Giuliani A, Pirri G, Bozzi A, Di Giulio A, Aschi M, Rinaldi AC (2008) Cell Mol Life Sci 65:2450

    Article  Google Scholar 

  32. Gabriel GJ, Som A, Madkour AE, Eren T, Tew GN (2007) Mater Sci Eng R Rep R57:28

    Article  Google Scholar 

  33. Gabriel GJ, Tew GN (2008) Org Biomol Chem 6:417

    Article  Google Scholar 

  34. Som A, Vemparala S, Ivanov I, Tew GN (2008) Biopolymers 90:83

    Article  Google Scholar 

  35. Goodman CM, Choi S, Shandler S, DeGrado WF (2007) Nat Chem Biol 3:252

    Article  Google Scholar 

  36. Kenawy ER, Worley SD, Broughton R (2007) Biomacromolecules 8:1359

    Article  Google Scholar 

  37. Lienkamp K, Tew GN (2009) Chem Eur J 15:11784

    Article  Google Scholar 

  38. Tossi A, Sandri L, Giangaspero A (2000) Biopolymers 55:4

    Article  Google Scholar 

  39. Dartois V, Sanchez-Quesada J, Cabezas E, Chi E, Dubbelde C, Dunn C, Granja J, Gritzen C, Weinberger D, Ghadiri MR, Parr TR Jr (2005) Antimicrob Agents Chemother 49:3302

    Article  Google Scholar 

  40. Srinivas N, Moehle K, Abou-Hadeed K, Obrecht D, Robinson JA (2007) Org Biomol Chem 5:3100

    Article  Google Scholar 

  41. Tossi A, Tarantino C, Romeo D (1997) Eur J Biochem 250:549

    Article  Google Scholar 

  42. Aoyagi H, Ando S, Lee S, Izumiya N (1988) Tetrahedron 44:877

    Article  Google Scholar 

  43. Javadpour MM, Barkley MD (1997) Biochemistry 36:9540

    Article  Google Scholar 

  44. Oh JE, Hong SY, Lee KH (1999) J Pept Res 54:129

    Article  Google Scholar 

  45. Oh JE, Hong SY, Lee KH (1999) J Pept Res 53:41

    Article  Google Scholar 

  46. Motizuki M, Itoh T, Satoh T, Yokota S, Yamada M, Shimamura S, Samejima T, Tsurugi K (1999) Biochem J 342:215

    Article  Google Scholar 

  47. Dawson NF, Craik DJ, McManus AM, Dashper SG, Reynolds EC, Tregear GW, Otvos L Jr, Wade JD (2000) J Pept Sci 6:19

    Article  Google Scholar 

  48. Oren Z, Ramesh J, Avrahami D, Suryaprakash N, Shai Y, Jelinek R (2002) Eur J Biochem 269:3869

    Article  Google Scholar 

  49. Pacor S, Giangaspero A, Bacac M, Sava G, Tossi A (2002) J Antimicrob Chemother 50:339

    Article  Google Scholar 

  50. Jiang Z, Kullberg BJ, van der Lee H, Vasil AI, Hale JD, Mant CT, Hancock REW, Vasil ML, Netea MG, Hodges RS (2008) Chem Biol Drug Des 72:483

    Article  Google Scholar 

  51. Castro MS, Cilli EM, Fontes W (2006) Curr Protein Pept Sci 7:473

    Article  Google Scholar 

  52. Chen YX, Mant CT, Farmer SW, Hancock REW, Vasil ML, Hodges RS (2005) J Biol Chem 280:12316

    Article  Google Scholar 

  53. Park Y, Lee DG, Jang S-H, Woo E-R, Jeong HG, Choi C-H, Hahm K-S (2003) Biochim Biophys Acta Proteins Proteomics 1645:172

    Article  Google Scholar 

  54. Prenner EJ, Kiricsi M, Jelokhani-Niaraki M, Lewis RNAH, Hodges RS, McElhaney RN (2005) J Biol Chem 280:2002

    Article  Google Scholar 

  55. Won HS, Jung SJ, Kim HE, Seo MD, Lee BJ (2004) J Biol Chem 279:14784

    Article  Google Scholar 

  56. Hamuro Y, Schneider JP, DeGrado WF (1999) J Am Chem Soc 121:12200

    Article  Google Scholar 

  57. Porter EA, Wang XF, Lee HS, Weisblum B, Gellman SH (2000) Nature 404:565

    Article  ADS  Google Scholar 

  58. Porter EA, Weisblum B, Gellman SH (2002) J Am Chem Soc 124:7324

    Article  Google Scholar 

  59. Liu DH, DeGrado WF (2001) J Am Chem Soc 123:7553

    Article  Google Scholar 

  60. Epand RF, Raguse TL, Gellman SH, Epand RM (2004) Biochemistry 43:9527

    Article  Google Scholar 

  61. Shai Y (2002) Curr Pharm Des 8:715

    Article  Google Scholar 

  62. Raguse TL, Porter EA, Weisblum B, Gellman SH (2002) J Am Chem Soc 124:12774

    Article  Google Scholar 

  63. Arvidsson PI, Frackenpohl J, Ryder NS, Liechty B, Petersen F, Zimmermann H, Camenisch GP, Woessner R, Seebach D (2001) ChemBioChem 2:771

    Article  Google Scholar 

  64. Oren Z, Shai Y (1997) Biochemistry 36:1826

    Article  Google Scholar 

  65. Schmitt MA, Weisblum B, Gellman SH (2004) J Am Chem Soc 126:6848

    Article  Google Scholar 

  66. Schmitt MA, Weisblum B, Gellman SH (2007) J Am Chem Soc 129:417

    Article  Google Scholar 

  67. Radzishevsky IS, Rotem S, Zaknoon F, Gaidukov L, Dagan A, Mor A (2005) Antimicrob Agents Chemother 49:2412

    Article  Google Scholar 

  68. Livne L, Kovachi T, Sarig H, Epand RF, Zaknoon F, Epand RM, Mor A (2009) Chem Biol 16:1250

    Article  Google Scholar 

  69. Radzishevsky IS, Rotem S, Bourdetsky D, Navon-Venezia S, Carmeli Y, Mor A (2007) Nat Biotechnol 25:657

    Article  Google Scholar 

  70. Zuckermann RN, Kerr JM, Kent SBH, Moos WH (1992) J Am Chem Soc 114:10646

    Article  Google Scholar 

  71. Miller SM, Simon RJ, Ng S, Zuckermann RN, Kerr JM, Moos WH (1994) Bioorg Med Chem Lett 4:2657

    Article  Google Scholar 

  72. Fowler SA, Blackwell HE (2009) Org Biomol Chem 7:1508

    Article  Google Scholar 

  73. Wu CW, Sanborn TJ, Huang K, Zuckermann RN, Barron AE (2001) J Am Chem Soc 123:6778

    Article  Google Scholar 

  74. Wu CW, Kirshenbaum K, Sanborn TJ, Patch JA, Huang K, Dill KA, Zuckermann RN, Barron AE (2003) J Am Chem Soc 125:13525

    Article  Google Scholar 

  75. Patch JA, Barron AE (2003) J Am Chem Soc 125:12092

    Article  Google Scholar 

  76. Chongsiriwatana NP, Patch JA, Czyzewski AM, Dohm MT, Ivankin A, Gidalevitz D, Zuckermann RN, Barron AE (2008) Proc Natl Acad Sci USA 105:2794

    Article  ADS  Google Scholar 

  77. Tew GN, Liu D, Chen B, Doerksen RJ, Kaplan J, Carroll PJ, Klein ML, DeGrado WF (2002) Proc Natl Acad Sci USA 99:5110

    Article  ADS  Google Scholar 

  78. Tew GN, Liu D, Chen B, Doerksen RJ, Kaplan J, Carroll PJ, Klein ML, DeGrado WF (2002) Proc Natl Acad Sci USA 99:5110

    Article  ADS  Google Scholar 

  79. Liu DH, Choi S, Chen B, Doerksen RJ, Clements DJ, Winkler JD, Klein ML, DeGrado WF (2004) Angew Chem Int Ed 43:1158

    Article  Google Scholar 

  80. Tang HZ, Doerksen RJ, Tew GN (2005) Chem Commun p 1537

    Article  Google Scholar 

  81. Tew GN, Clements D, Tang HZ, Arnt L, Scott RW (2006) Biochim Biophys Acta Biomembr 1758:1387

    Article  Google Scholar 

  82. Arnt L, Tew GN (2003) Langmuir 19:2404

    Article  Google Scholar 

  83. Breitenkamp RB, Arnt L, Tew GN (2005) Polym Adv Technol 16:189

    Article  Google Scholar 

  84. Yang L, Gordon VD, Mishra A, Som A, Purdy KR, Davis MA, Tew GN, Wong GCL (2007) J Am Chem Soc 129:12141

    Article  Google Scholar 

  85. Ishitsuka Y, Arnt L, Majewski J, Frey S, Ratajczek M, Kjaer K, Tew GN, Lee KYC (2006) J Am Chem Soc 128:13123

    Article  Google Scholar 

  86. Kuroda K, Caputo Gregory A, DeGrado William F (2009) Chem Eur J 15:1123

    Article  Google Scholar 

  87. Mowery BP, Lindner AH, Weisblum B, Stahl SS, Gellman SH (2009) J Am Chem Soc 131:9735

    Article  Google Scholar 

  88. Gelman MA, Weisblum B, Lynn DM, Gellman SH (2004) Org Lett 6:557

    Article  Google Scholar 

  89. Ilker MF, Nusslein K, Tew GN, Coughlin EB (2004) J Am Chem Soc 126:15870

    Article  Google Scholar 

  90. Lienkamp K, Madkour AE, Kumar K-N, Nüsslein K, Tew GN (2009) Chem Eur J 15:11715

    Article  Google Scholar 

  91. Al-Badri ZM, Som A, Lyon S, Nelson Christopher F, Nusslein K, Tew Gregory N (2008) Biomacromolecules 9:2805

    Article  Google Scholar 

  92. Colak S, Nelson CF, Nusslein K, Tew GN (2009) Biomacromolecules 10:353

    Article  Google Scholar 

  93. Palermo EF, Kuroda K (2009) Biomacromolecules 10:1416

    Article  Google Scholar 

  94. Lienkamp K, Kumar K-N, Som A, Nüsslein K, Tew GN (2009) Chem Eur J 15:11710

    Article  Google Scholar 

  95. Chen CZ, Beck-Tan NC, Dhurjati P, Dyk TKv, LaRossa RA, Cooper SL (2000) Biomacromolecules 1:473

    Article  Google Scholar 

  96. Chen CZ, Cooper SL (2000) Adv Mater 12:843

    Article  Google Scholar 

  97. Tulu M, Aghatabay NM, Senel M, Dizman C, Parali T, Dulger B (2009) Eur J Med Chem 44:1093

    Article  Google Scholar 

  98. Lopez AI, Reins RY, McDermott AM, Trautner BW, Cai C (2009) Mol Biosyst 5:1148

    Article  Google Scholar 

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Acknowledgment

This work was funded by ARO, MRSEC, NIH, and ONR. Funding by the German Research Foundation (DFG-Forschungsstipendium to K.L.) and the Ludcke Foundation (Fellowship to K.L.) is gratefully acknowledged.

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Correspondence to Gregory N. Tew .

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Lienkamp, K., Madkour, A.E., Tew, G.N. (2010). Antibacterial Peptidomimetics: Polymeric Synthetic Mimics of Antimicrobial Peptides. In: Abe, A., Kausch, HH., Möller, M., Pasch, H. (eds) Polymer Composites – Polyolefin Fractionation – Polymeric Peptidomimetics – Collagens. Advances in Polymer Science, vol 251. Springer, Berlin, Heidelberg. https://doi.org/10.1007/12_2010_85

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